HHsearch alignment for GI: 254780455 and conserved domain: pfam04095
>pfam04095 NAPRTase Nicotinate phosphoribosyltransferase (NAPRTase) family. Nicotinate phosphoribosyltransferase (EC:2.4.2.11) is the rate limiting enzyme that catalyses the first reaction in the NAD salvage synthesis. This family also includes Pre-B cell enhancing factor that is a cytokine. This family is related to Quinolinate phosphoribosyltransferase pfam01729.
Probab=100.00 E-value=0 Score=418.92 Aligned_cols=230 Identities=37% Similarity=0.468 Sum_probs=195.0
Q ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHH-----
Q ss_conf 759984244347978899999999842121201247889999728987675204898764001220367865499-----
Q gi|254780455|r 180 LKIVDFGTRRRHSLTWQKWCIEALQEGIKDSFLGTSNALLAMNYKINAIGTSAHELPMVAAAITRTDIETQNAPY----- 254 (418)
Q Consensus 180 ~~l~eFG~RR~~s~~~q~~~v~~~raa~~~gf~GTSNv~aa~~~gi~~~GTmaHs~v~a~~~~~~~~~~~~~~~~----- 254 (418)
T Consensus 1 fkl~dFG~RR~~s~~~~~~~~----~A~l~gf~GTSNv~a~~~~~Ip~~GT~aH~~~~~~~e~~~~~~~~~~~~~~~~~~ 76 (243)
T pfam04095 1 FKLHDFGTRRRSSLESQEIVG----SAHLVNFLGTSNVLAAAGYSIPAAGTSAHEWWGAFQELDAFRNMLEQFQKGKLSV 76 (243)
T ss_pred CCCCCCCCCCCCCHHHHHHHH----HHHHCCCCCCCHHHHHHHCCCCCCCHHHEEECCCCCCHHHHHHHHHHCCCCCCEE
T ss_conf 930506888879879999999----9986278300079999866999654034041222265579999999655688244
Q ss_pred --HHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCC----CEEEEEC
Q ss_conf --9999999963988659863468989999989973100243412888878999999999997798811----3089973
Q gi|254780455|r 255 --QMMQQWNRLYDDNLLIVLPDSFGTDFFLEHAPSWMTQWKGFRHDSASPIEGGEKIIAWWKKMNCNPQ----NKFLVFS 328 (418)
Q Consensus 255 --~a~~~~~~~yp~~~~i~L~DTy~~~~~l~~~~~~~~~~~GVR~DSGD~~~~~~k~~~~l~~~Gidp~----~k~iv~S 328 (418)
T Consensus 77 ~~d~yd~~~~~~-~~l~~~L~d~i~~~~~l~~~~---~~~~gvR~DSGD~~~~~~~~~~~~~~~g~~~~k~~~~~~Ii~s 152 (243)
T pfam04095 77 VSDALDLWLAEY-GNLGIALTDLVGTDAFLRDFP---LYFLGVRPDSGDPVEWGEKLIAHFGSTNIDGYKVLNTKRLIFS 152 (243)
T ss_pred EHHHHHHHHHHH-CCCHHHCCHHHHHHHHHHHCC---CCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC
T ss_conf 148999899885-510111552430378898568---8750464588876899999999999739985567882699977
Q ss_pred CCCCHHHHHHHHHHHCC-CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCC-CHHHH
Q ss_conf 89899999999997248-97378633464314656666665567773216898575768111673268875248-88999
Q gi|254780455|r 329 DNLDVDSIIYTYKHFEN-RVQMIFGWGTNLTNDFDGCTPYQNLQTEKLQIVCKVTKANDKHAVKLSDDPAKTTG-DISEI 406 (418)
Q Consensus 329 d~Ld~e~i~~l~~~~~~-~~~~~fGIGT~Lt~d~~~~~~~~~~~~~~l~~VyKlve~~g~P~~KlSd~~~K~tg-~~~~~ 406 (418)
T Consensus 153 d~Lde~~i~~l~~~~~~~~~~~~FGiGt~L~t~~~~~~~~~v~K~~al~i~~k~v~i~g~P~~klS~~~~K~~~~dp~~~ 232 (243)
T pfam04095 153 DGLDVEKIIEILEHLKGNGFNIAFGIGTNLTQDLNRDTLGFAYKLTPLNIVIKLVEVNGDPVTKLSDSSGKGRCGDPAFV 232 (243)
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCCCCCCEEECCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 99999999999999975487058851643130588886455332265156518998379855235788777747998999
Q ss_pred HHHHHHCCCCC
Q ss_conf 99999809666
Q gi|254780455|r 407 KRYLKIFKIKK 417 (418)
Q Consensus 407 ~~~~~~~~~~~ 417 (418)
T Consensus 233 ~~~r~~~~~~~ 243 (243)
T pfam04095 233 DLLRRVFGNGE 243 (243)
T ss_pred HHHHHHHCCCC
T ss_conf 99999858899