HHsearch results for GI: 254780455 and protein with PDBid: 2jbm_A
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens}
Probab=99.41 E-value=2.4e-11 Score=95.81 Aligned_cols=256 Identities=12% Similarity=-0.019 Sum_probs=160.8
Q ss_pred CCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEC
Q ss_conf 99659999996588755440000236999999997169998999999837775555578988999975089984168733
Q gi|254780455|r 34 PDIKVTFSLFNRQTQLHLSDKIDESELRTQLDHVRSLRITEKERKWLVENSFYGKKQLFEPKFLSWLSDFQLPEYDLSHK 113 (418)
Q Consensus 34 ~~~~v~f~~~~R~~~~~~~~~~v~~gL~~~i~~l~~~rft~eei~yL~~~~~~~~~~~~~~~fl~~L~~~~f~~~~~~~~ 113 (418)
.+..++..++.|.+ .+++|++...+.++.+-. +++| +-++.-.+.
T Consensus 40 ~~~~~~a~i~ake~-------gvlaG~~~~~~i~~~~~~---~v~~-------------------------~~~dG~~v~ 84 (299)
T 2jbm_A 40 GAGPSQAALWAKSP-------GVLAGQPFFDAIFTQLNC---QVSW-------------------------FLPEGSKLV 84 (299)
T ss_dssp CSCEEEEEEEECSC-------EECCCHHHHHHHHHHTTC---EEEE-------------------------SSCTTCEEC
T ss_pred CCCEEEEEEEECCC-------EEEECHHHHHHHHHHCCC---EEEE-------------------------EECCCCEEE
T ss_conf 99718999998899-------799878999999996697---8999-------------------------966799885
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCH
Q ss_conf 99269998548778677888999999888887753134866799999999999998777674269975998424434797
Q gi|254780455|r 114 KGQYVLNFHGLWKDVTLWEIPSLIIISTLYSRITVRSMNPFSVDLLYAQAKKKLWSKIIKLKNFSGLKIVDFGTRRRHSL 193 (418)
Q Consensus 114 eg~~~i~ieGp~~~~~l~EtplL~iine~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~l~eFG~RR~~s~ 193 (418)
+|+++++++||.......|..+||+|+.+...+|.+ .+...++. ..+.++.=++||+.++-
T Consensus 85 ~g~~I~~i~G~a~~il~~Er~~LN~L~~~SGIAT~t---------------~~~v~~~~----~~~~~~~i~~TRKt~Pg 145 (299)
T 2jbm_A 85 PVARVAEVRGPAHCLLLGERVALNTLARCSGIASAA---------------AAAVEAAR----GAGWTGHVAGTRKTTPG 145 (299)
T ss_dssp SSEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHH----HTTCCSEEECCSCCCTT
T ss_pred CCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHH----CCCCCEEEEECCCCCCC
T ss_conf 385799997079999999999999999876444445---------------89999973----37980599865513536
Q ss_pred HHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCC--CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC-CCEE
Q ss_conf 889999999984212120124788999972898--7675204898764001220367865499999999996398-8659
Q gi|254780455|r 194 TWQKWCIEALQEGIKDSFLGTSNALLAMNYKIN--AIGTSAHELPMVAAAITRTDIETQNAPYQMMQQWNRLYDD-NLLI 270 (418)
Q Consensus 194 ~~q~~~v~~~raa~~~gf~GTSNv~aa~~~gi~--~~GTmaHs~v~a~~~~~~~~~~~~~~~~~a~~~~~~~yp~-~~~i 270 (418)
. ..-.-+|...||+... ++|+. +.....| +.++++.. .+.+...+..+. ..-.
T Consensus 146 ~----r~l~k~Av~~GGg~~H-------R~~L~d~vlikdnH--i~~~g~~~-----------~a~~~~~~~~~~~~~Ie 201 (299)
T 2jbm_A 146 F----RLVEKYGLLVGGAASH-------RYDLGGLVMVKDNH--VVAAGGVE-----------KAVRAARQAADFALKVE 201 (299)
T ss_dssp C----HHHHHHHHHHTTCBCC-------CCSTTSSEEECHHH--HHHHTSHH-----------HHHHHHHHHHTTTSCEE
T ss_pred H----HHHHHHHHHHCCCCCE-------ECCCCCCCCCCCCH--HHHCCCHH-----------HHHHHHHHHCCCCEEEE
T ss_conf 2----8999999986387524-------31576433014217--77628999-----------99999986316743789
Q ss_pred EEECCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEE
Q ss_conf 86346898999998997310024341288887899999999999779881130899738989999999999724897378
Q gi|254780455|r 271 VLPDSFGTDFFLEHAPSWMTQWKGFRHDSASPIEGGEKIIAWWKKMNCNPQNKFLVFSDNLDVDSIIYTYKHFENRVQMI 350 (418)
Q Consensus 271 ~L~DTy~~~~~l~~~~~~~~~~~GVR~DSGD~~~~~~k~~~~l~~~Gidp~~k~iv~Sd~Ld~e~i~~l~~~~~~~~~~~ 350 (418)
.-+||+ +.+. .....+.++|++|..+|.. .+++++.+++.+ | ...|.+|+|+|++.+.+. +...+|.
T Consensus 202 vEv~~~--~ea~---~a~~~g~d~I~LDn~s~e~-l~~~v~~l~~~~--~-~v~ieaSGGI~~~ni~~y----a~~GVD~ 268 (299)
T 2jbm_A 202 VECSSL--QEAV---QAAEAGADLVLLDNFKPEE-LHPTATVLKAQF--P-SVAVEASGGITLDNLPQF----CGPHIDV 268 (299)
T ss_dssp EEESSH--HHHH---HHHHTTCSEEEEESCCHHH-HHHHHHHHHHHC--T-TSEEEEESSCCTTTHHHH----CCTTCCE
T ss_pred EECCCH--HHHH---HHHHCCCCEEEEECCCHHH-HHHHHHHHHCCC--C-CEEEEEECCCCHHHHHHH----HHCCCCE
T ss_conf 704889--9999---9997299999980889999-999999984648--9-769999899999999999----9729899
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEE
Q ss_conf 633464314656666665567773216898575768111673
Q gi|254780455|r 351 FGWGTNLTNDFDGCTPYQNLQTEKLQIVCKVTKANDKHAVKL 392 (418)
Q Consensus 351 fGIGT~Lt~d~~~~~~~~~~~~~~l~~VyKlve~~g~P~~Kl 392 (418)
+++|. || .+.|++++-+++++.+|.|+.|+
T Consensus 269 is~G~-lt-----------~~a~~~D~sl~i~~~~~~p~~k~ 298 (299)
T 2jbm_A 269 ISMGM-LT-----------QAAPALDFSLKLFAKEVAPVPKI 298 (299)
T ss_dssp EECTH-HH-----------HSCCCCCEEEEEEEEC-------
T ss_pred EECCH-HH-----------CCCCCCCEEEEEEECCCCCCCCC
T ss_conf 98296-54-----------59986431799775588777777