HHSEARCH alignment of GI: 254780455 and SCOP domain: d1vlpa2

Alignment
>d1vlpa2 c.1.17.2 (A:150-415) Nicotinate phosphoribosyltransferase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=0  Score=516.74  Aligned_cols=253  Identities=34%  Similarity=0.507  Sum_probs=225.3

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH-------HHHHHCCCCEEHHHHHHHHHHCCCCCCCCC
Q ss_conf             9999999999877767426997599842443479788999999-------998421212012478899997289876752
Q gi|254780455|r  159 LYAQAKKKLWSKIIKLKNFSGLKIVDFGTRRRHSLTWQKWCIE-------ALQEGIKDSFLGTSNALLAMNYKINAIGTS  231 (418)
Q Consensus       159 ~~~~~~~~~~~k~~~~~~~~~~~l~eFG~RR~~s~~~q~~~v~-------~~raa~~~gf~GTSNv~aa~~~gi~~~GTm  231 (418)
                      .|..+..++++|++++.+ +|++++|||+|||||++||+.++.       ++|+++++||+|||||++|++|||||+|||
T Consensus         3 ~y~~~~~~~~~k~~~l~~-~g~~~~eFG~RR~~~~~~~~~v~q~~~~~~~~~raa~iggf~gTSNv~aa~~~gip~~GTm   81 (266)
T d1vlpa2           3 DYENQLEQAEKKAETLFD-NGIRFSEFGTRRRRSLKAQDLIMQGIMKAVNGNPDRNKSLLLGTSNILFAKKYGVKPIGTV   81 (266)
T ss_dssp             CCTTHHHHHHHHHHHHHH-TTCCEEECCSTTCSCHHHHHHHHHHHHHHHHHSHHHHTTTEEEESBHHHHHHHTCCBCCCC
T ss_pred             CHHHHHHHHHHHHHHHHH-CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCH
T ss_conf             878999999999999985-8997986467776773147999999999987516876276841067999997699986554


Q ss_pred             CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC-CCEEEEECCCCHHHHHHHH-HHHHCCCCEEECCCCCHHHHHHHH
Q ss_conf             04898764001220367865499999999996398-8659863468989999989-973100243412888878999999
Q gi|254780455|r  232 AHELPMVAAAITRTDIETQNAPYQMMQQWNRLYDD-NLLIVLPDSFGTDFFLEHA-PSWMTQWKGFRHDSASPIEGGEKI  309 (418)
Q Consensus       232 aHs~v~a~~~~~~~~~~~~~~~~~a~~~~~~~yp~-~~~i~L~DTy~~~~~l~~~-~~~~~~~~GVR~DSGD~~~~~~k~  309 (418)
                      ||||||+|+++.+   ++++++..|++.|+++||+ +++|+|+|||+++.|++++ +....++.|||||||||+++++++
T Consensus        82 AHs~v~~~~~~~~---~~~~a~~~a~~~~vd~y~~~~~~I~l~Dt~~~~~~~~~~~~~~~~~~~GVRlDSGDl~~~~~~~  158 (266)
T d1vlpa2          82 AHEWVMGVASISE---DYLHANKNAMDCWINTFGAKNAGLALTDTFGTDDFLKSFRPPYSDAYVGVRQDSGDPVEYTKKI  158 (266)
T ss_dssp             CHHHHHHHHHHHT---CCTTHHHHHHHHHHHHHCGGGCCEEECCTTCHHHHHTTCCTTHHHHSCEEEECSSCHHHHHHHH
T ss_pred             HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf             8999999764548---9998689999999997576456652145776889998777876432153116983789999999


Q ss_pred             HHHHHHCCCCCC-CEEEEECCCCCHHHHHHHHHHH-CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
Q ss_conf             999997798811-3089973898999999999972-48973786334643146566666655677732168985757681
Q gi|254780455|r  310 IAWWKKMNCNPQ-NKFLVFSDNLDVDSIIYTYKHF-ENRVQMIFGWGTNLTNDFDGCTPYQNLQTEKLQIVCKVTKANDK  387 (418)
Q Consensus       310 ~~~l~~~Gidp~-~k~iv~Sd~Ld~e~i~~l~~~~-~~~~~~~fGIGT~Lt~d~~~~~~~~~~~~~~l~~VyKlve~~g~  387 (418)
                      |++|++.|.+|. +|.||+||++|+|+++.|++.+ +++++|+|||||+|+|++.+..+ .+.+.|+||+||||||+||+
T Consensus       159 r~~~~~~~~~~~~~k~iI~ss~~~~E~~i~i~~~~~~ga~id~fGVGT~Lvt~~~~~s~-~~~~~p~l~~VyKLve~~G~  237 (266)
T d1vlpa2         159 SHHYHDVLKLPKFSKIICYSDSLNVEKAITYSHAAKENGMLATFGIGTNFTNDFRKKSE-PQVKSEPLNIVIKLLEVNGN  237 (266)
T ss_dssp             HHHHHTTSCCCTTSSEEEECSSCCHHHHHHHHHHHHHTTCEEEEEECHHHHSCEECSSS-TTSEECCCCEEEEEEEETTE
T ss_pred             HHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCC-CCCCCCCCCEEEEEEEECCE
T ss_conf             99999816878877279980898578999999999727941223466654305765665-55679863379999987885


Q ss_pred             CEEEEECCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf             11673268875248889999999980966
Q gi|254780455|r  388 HAVKLSDDPAKTTGDISEIKRYLKIFKIK  416 (418)
Q Consensus       388 P~~KlSd~~~K~tg~~~~~~~~~~~~~~~  416 (418)
                      ||+|+||+|+|+|||++.++||+|+|++.
T Consensus       238 P~~KlSd~~~K~T~~~~~v~r~k~~~g~~  266 (266)
T d1vlpa2         238 HAIKISDNLGKNMGDPATVKRVKEELGYT  266 (266)
T ss_dssp             ECCBCCSSTTCCBSCHHHHHHHHHHTTCC
T ss_pred             EEEEECCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf             44672389876569999999999970899


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Nicotinate/Quinolinate PRTase C-terminal domain-like
family: Monomeric nicotinate phosphoribosyltransferase C-terminal domain
domain: Nicotinate phosphoribosyltransferase, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]