HHSEARCH alignment of GI: 254780455 and SCOP domain: d1yira2

Alignment
>d1yira2 d.41.2.2 (A:4-144) Nicotinate phosphoribosyltransferase, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=100.00  E-value=1.4e-39  Score=287.88  Aligned_cols=133  Identities=29%  Similarity=0.547  Sum_probs=121.7

Q ss_pred             CCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
Q ss_conf             67100124401178999999999848996599999965887554400002369999999971699989999998377755
Q gi|254780455|r    8 SDPIISSLLDTDFYKILMLQLIWKFYPDIKVTFSLFNRQTQLHLSDKIDESELRTQLDHVRSLRITEKERKWLVENSFYG   87 (418)
Q Consensus         8 ~~piI~SlLdTD~YkltM~~a~~~~~~~~~v~f~~~~R~~~~~~~~~~v~~gL~~~i~~l~~~rft~eei~yL~~~~~~~   87 (418)
                      ++|||+||||||+|||||+||||+++|+++|+|+|++|++| +.+++  ++||+++|++|+++|||++|++||++.    
T Consensus         6 ~~~ii~SlLdTDlYklTM~qa~~~~~~~~~a~f~~~~R~~p-~~~~~--~~gl~~~i~~l~~lrFt~eei~yL~~~----   78 (141)
T d1yira2           6 SERIVQNLLDTDFYKLTMMQAVLHNYPNAEVEWEFRCRNQE-DLRLY--LPAIREQLEYLAGLAISDEQLAFLERI----   78 (141)
T ss_dssp             CSCSSCSTTSSBHHHHHHHHHHHHHCTTCEEEEEEEETTCC-CCGGG--HHHHHHHHHHHHHCCCCHHHHHHHHTS----
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC-CHHHH--HHHHHHHHHHHHHCCCCHHHHHHHHCC----
T ss_conf             72243130522789999999999869998699999935884-03659--999999999999679999999999718----


Q ss_pred             CCCCCCHHHHHHHHHCCCCCCEEEE--CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             5557898899997508998416873--3992699985487786778889999998888877531
Q gi|254780455|r   88 KKQLFEPKFLSWLSDFQLPEYDLSH--KKGQYVLNFHGLWKDVTLWEIPSLIIISTLYSRITVR  149 (418)
Q Consensus        88 ~~~~~~~~fl~~L~~~~f~~~~~~~--~eg~~~i~ieGp~~~~~l~EtplL~iine~~~~~~~~  149 (418)
                        ++|+++|++||++|||+++++++  .+|+|+|+|+|||.+||||||||||||||+|+++.++
T Consensus        79 --~~f~~~fldyL~~frf~~~~~~~~~~~~ep~i~v~Gp~~e~~L~Et~lL~iinE~~~~~~~p  140 (141)
T d1yira2          79 --PFLAPDFIRFLGLFRFNPRYVQTGIENDEFFLRLKGPWLHVILFEVPLLAMISEVRNRARYP  140 (141)
T ss_dssp             --TTSCHHHHHHHHHCCCCGGGEEEEEETTEEEEEEEEEHHHHGGGHHHHHHHHHHHHHHHHCT
T ss_pred             --CCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             --99998999999868998659776057995889999779999999999999999989734389


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: alpha/beta-Hammerhead
superfamily: Nicotinate/Quinolinate PRTase N-terminal domain-like
family: Monomeric nicotinate phosphoribosyltransferase N-terminal domain-like
domain: Nicotinate phosphoribosyltransferase, N-terminal domain
species: Pseudomonas aeruginosa [TaxId: 287]