Query gi|254780455|ref|YP_003064868.1| nicotinate phosphoribosyltransferase [Candidatus Liberibacter asiaticus str. psy62] Match_columns 418 No_of_seqs 127 out of 1031 Neff 6.7 Searched_HMMs 13730 Date Wed Jun 1 06:29:04 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780455.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1ybea1 c.1.17.2 (A:168-433) N 100.0 0 0 599.0 27.2 265 153-417 2-266 (266) 2 d1yira1 c.1.17.2 (A:145-399) N 100.0 0 0 522.3 23.5 243 162-415 5-255 (255) 3 d1vlpa2 c.1.17.2 (A:150-415) N 100.0 0 0 516.7 19.1 253 159-416 3-266 (266) 4 d2f7fa1 c.1.17.1 (A:141-485) P 100.0 0 0 403.7 16.9 212 168-408 2-228 (345) 5 d1ytda1 c.1.17.1 (A:120-389) N 100.0 0 0 358.7 16.9 198 169-399 2-206 (270) 6 d2i14a1 c.1.17.1 (A:111-389) N 100.0 2.8E-45 0 326.7 16.7 197 168-398 6-211 (279) 7 d1ybea2 d.41.2.2 (A:8-167) Nic 100.0 1.7E-44 0 321.6 17.9 143 7-149 16-158 (160) 8 d1vlpa1 d.41.2.2 (A:1-149) Nic 100.0 7E-41 5.6E-45 296.7 12.7 135 8-148 2-148 (149) 9 d1yira2 d.41.2.2 (A:4-144) Nic 100.0 1.4E-39 9.8E-44 287.9 16.6 133 8-149 6-140 (141) 10 d2f7fa2 d.41.2.1 (A:4-140) Put 100.0 3.7E-34 2.7E-38 250.6 15.6 123 14-143 6-136 (137) 11 d1ytda2 d.41.2.1 (A:1-119) Nic 99.9 6.4E-23 4.6E-27 173.6 5.0 118 1-144 1-118 (119) 12 d2i14a2 d.41.2.1 (A:1-110) Nic 99.8 1E-18 7.4E-23 144.7 10.3 110 1-140 1-110 (110) 13 d1qpoa2 d.41.2.1 (A:2-116) Qui 49.5 6.2 0.00045 15.9 4.8 97 9-142 11-113 (115) 14 d1o4ua1 c.1.17.1 (A:104-273) Q 45.3 7.2 0.00052 15.5 9.6 101 256-381 67-168 (170) 15 d1z3ea1 c.47.1.12 (A:1-114) Re 45.0 6.6 0.00048 15.7 2.5 39 304-343 11-49 (114) 16 d1qapa2 d.41.2.1 (A:8-129) Qui 38.4 9.1 0.00066 14.8 4.9 35 108-142 86-120 (122) 17 d1o4ua2 d.41.2.1 (A:1-103) Qui 29.6 12 0.00091 13.8 4.8 35 108-142 67-101 (103) 18 d1rw1a_ c.47.1.12 (A:) Hypothe 27.9 13 0.00097 13.6 2.7 38 305-343 12-49 (114) 19 d1lvaa3 a.4.5.35 (A:511-574) C 27.1 9.2 0.00067 14.7 0.9 47 299-345 2-49 (64) 20 d7reqa2 c.23.6.1 (A:561-728) M 26.7 14 0.001 13.5 7.2 75 278-357 77-151 (168) No 1 >d1ybea1 c.1.17.2 (A:168-433) Nicotinate phosphoribosyltransferase, C-terminal domain {Agrobacterium tumefaciens [TaxId: 358]} Probab=100.00 E-value=0 Score=598.96 Aligned_cols=265 Identities=60% Similarity=1.106 Sum_probs=257.1 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCC Q ss_conf 66799999999999998777674269975998424434797889999999984212120124788999972898767520 Q gi|254780455|r 153 PFSVDLLYAQAKKKLWSKIIKLKNFSGLKIVDFGTRRRHSLTWQKWCIEALQEGIKDSFLGTSNALLAMNYKINAIGTSA 232 (418) Q Consensus 153 ~~~~~~~~~~~~~~~~~k~~~~~~~~~~~l~eFG~RR~~s~~~q~~~v~~~raa~~~gf~GTSNv~aa~~~gi~~~GTma 232 (418) ++.++.+++.+..++++|++++++++|++++|||+|||||++||++++.++|+++++||+|||||++|++|||||+|||| T Consensus 2 ~~~~~~~~~~~~~~~~~K~~rlr~~~g~~~~eFG~RRa~~~~~~~~~~~a~raa~~ggf~gTSNV~aa~~~gip~~GTmA 81 (266) T d1ybea1 2 YFTLDVLYARAKAKMWEKVERLRELPGLRISDFGTRRRHSFLWQRWCVEALKEGIGPAFTGTSNVLLAMDSDLEAVGTNA 81 (266) T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCTTCCEEECCTTTCSCHHHHHHHHHHHHHHHGGGEEEESBHHHHHHHTCCBCCCCC T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCH T ss_conf 52189999999999999999997078997986068776885168999999999820787521478999975999776533 Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHH Q ss_conf 48987640012203678654999999999963988659863468989999989973100243412888878999999999 Q gi|254780455|r 233 HELPMVAAAITRTDIETQNAPYQMMQQWNRLYDDNLLIVLPDSFGTDFFLEHAPSWMTQWKGFRHDSASPIEGGEKIIAW 312 (418) Q Consensus 233 Hs~v~a~~~~~~~~~~~~~~~~~a~~~~~~~yp~~~~i~L~DTy~~~~~l~~~~~~~~~~~GVR~DSGD~~~~~~k~~~~ 312 (418) |||||+|+++.+.+.+++++|..||++|+++||++++|+|+|||++++|++++.++.+++.|||||||||.++++++|++ T Consensus 82 Hs~v~~~~~l~~~~~~~~~~e~~Af~~~~~~yp~~~~i~L~DT~~~~~~~~~~~~~~~~~~GVRlDSGDl~~ls~~~r~~ 161 (266) T d1ybea1 82 HELPMVVAALAQTNEELAAAPYQVLKDWNRLYGGNLLIVLPDAFGTAAFLRNAPEWVADWTGFRPDSAPPIEGGEKIIEW 161 (266) T ss_dssp THHHHHHHHHCCSHHHHHHHHHHHHHHHHHHCCGGGCEECCCTTCHHHHHHTCCGGGGGSSEECCCSSCHHHHHHHHHHH T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHH T ss_conf 78999877642430889998999999999977997368842756589999988886266654550899828899999999 Q ss_pred HHHCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEE Q ss_conf 99779881130899738989999999999724897378633464314656666665567773216898575768111673 Q gi|254780455|r 313 WKKMNCNPQNKFLVFSDNLDVDSIIYTYKHFENRVQMIFGWGTNLTNDFDGCTPYQNLQTEKLQIVCKVTKANDKHAVKL 392 (418) Q Consensus 313 l~~~Gidp~~k~iv~Sd~Ld~e~i~~l~~~~~~~~~~~fGIGT~Lt~d~~~~~~~~~~~~~~l~~VyKlve~~g~P~~Kl 392 (418) ||++|++|.+|+||+||||||++|..|+++++++++++|||||+||||+.+..+.|+.++|+||+||||||+||+||||+ T Consensus 162 ld~~G~~p~~~~Iv~S~~LDe~~i~~l~~~~~g~~~d~fGVGT~L~~~~~~~~~~t~~~~p~l~~VyKLve~~g~P~~Kl 241 (266) T d1ybea1 162 WRKMGRDPRTKMLIFSDGLDVDAIVDTYRHFEGRVRMSFGWGTNLTNDFAGCAPKTIASLKPISIVCKVSDANGRPAVKL 241 (266) T ss_dssp HHHTTCCGGGSEEEECTTCCHHHHHHHHHHHTTTSEEEEEECHHHHCCCTTCCC-----CCCCCEEEEEEEETTEECCBC T ss_pred HHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCEEECCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEE T ss_conf 99829997884799979999999999999854673301210400012567777664456887546987520398644673 Q ss_pred ECCCCCCCCCHHHHHHHHHHCCCCC Q ss_conf 2688752488899999999809666 Q gi|254780455|r 393 SDDPAKTTGDISEIKRYLKIFKIKK 417 (418) Q Consensus 393 Sd~~~K~tg~~~~~~~~~~~~~~~~ 417 (418) ||+++|+|||++.|++|+|+|+.++ T Consensus 242 Sd~~~K~tg~~~~~~~~~r~~g~~~ 266 (266) T d1ybea1 242 SDNPQKATGDPAEVERYLKFFGEED 266 (266) T ss_dssp CSSGGGCBSCHHHHHHHHHHHCCCC T ss_pred CCCCCCCCCCHHHHHHHHHHHCCCC T ss_conf 4898665699899999999736799 No 2 >d1yira1 c.1.17.2 (A:145-399) Nicotinate phosphoribosyltransferase, C-terminal domain {Pseudomonas aeruginosa [TaxId: 287]} Probab=100.00 E-value=0 Score=522.31 Aligned_cols=243 Identities=33% Similarity=0.536 Sum_probs=217.0 Q ss_pred HHHHHHHHHHHHH------HCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCCHHH Q ss_conf 9999999877767------4269975998424434797889999999984212120124788999972898767520489 Q gi|254780455|r 162 QAKKKLWSKIIKL------KNFSGLKIVDFGTRRRHSLTWQKWCIEALQEGIKDSFLGTSNALLAMNYKINAIGTSAHEL 235 (418) Q Consensus 162 ~~~~~~~~k~~~~------~~~~~~~l~eFG~RR~~s~~~q~~~v~~~raa~~~gf~GTSNv~aa~~~gi~~~GTmaHs~ 235 (418) .+..++.+|.+.+ .+.+|++++|||+|||||+++|++++.++|+++++||+|||||++|++|||||+||||||| T Consensus 5 ~~~~~l~~k~~~l~~~~~~~~~~g~kl~eFG~RR~~s~~~~~a~~~~~raa~~~gf~GTSNvlaa~~~gip~~GTmAHs~ 84 (255) T d1yira1 5 QARERLQEKFDWLRREASAEELAGFKMADFGTRRRFSYRVHEAVVSGLKEDFPGCFVGTSNVHLARKLDLKPLGTMAHEW 84 (255) T ss_dssp HHHHHHHHHHHHHHTTSCHHHHTTCEEEECCSTTCSCHHHHHHHHHHHHHHCSSEEEEESBHHHHHHTTCCBCCCCCHHH T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHH T ss_conf 99999999999997401333579986874588876776218999999999863287112389999985989777444699 Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH-HHCCCCEEECCCCCHHHHHHHHHHHHH Q ss_conf 8764001220367865499999999996398865986346898999998997-310024341288887899999999999 Q gi|254780455|r 236 PMVAAAITRTDIETQNAPYQMMQQWNRLYDDNLLIVLPDSFGTDFFLEHAPS-WMTQWKGFRHDSASPIEGGEKIIAWWK 314 (418) Q Consensus 236 v~a~~~~~~~~~~~~~~~~~a~~~~~~~yp~~~~i~L~DTy~~~~~l~~~~~-~~~~~~GVR~DSGD~~~~~~k~~~~l~ 314 (418) ||+|+++.+ +++++|..||+.|+++||++++|+|+|||++++++.++.. ...++.|||+|||||.++++++|++|+ T Consensus 85 v~~~~~~~~---~~~~~e~~Af~~~~~~~p~~l~i~l~DT~~~~~~l~~~~~~~~~~~~GVRlDSGD~~~~~~~~~~~l~ 161 (255) T d1yira1 85 LMAHQQLGP---RLIDSQSAALDCWVREYRGLLGIALTDCITTDAFLRDFDLYFAKLFDGLRHDSGDPLLWAEKTIAHYL 161 (255) T ss_dssp HHHHHHHSB---CGGGHHHHHHHHHHHHHTTSSCEEESCSSCHHHHHHHCCHHHHHHCCEEEECSSCHHHHHHHHHHHHH T ss_pred HHHHHHCCC---HHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHH T ss_conf 999982241---14679999999999867986267423221088899999998563667433388555569999999999 Q ss_pred HCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEC Q ss_conf 77988113089973898999999999972489737863346431465666666556777321689857576811167326 Q gi|254780455|r 315 KMNCNPQNKFLVFSDNLDVDSIIYTYKHFENRVQMIFGWGTNLTNDFDGCTPYQNLQTEKLQIVCKVTKANDKHAVKLSD 394 (418) Q Consensus 315 ~~Gidp~~k~iv~Sd~Ld~e~i~~l~~~~~~~~~~~fGIGT~Lt~d~~~~~~~~~~~~~~l~~VyKlve~~g~P~~KlSd 394 (418) ++|++|.+|+||+|||||+|++++++++++++++++|||||+|+||+ .++|+||+||||||+||+||+|+|| T Consensus 162 ~~g~~~~~k~iI~sdgl~~e~i~~~l~~~~~~~~~~FGVGT~L~t~~--------~~~p~l~~VyKLve~~g~P~~KlS~ 233 (255) T d1yira1 162 KLGIDPLTKTLVFSDGLDLPRALKIYRALQGRINVSFGIGTHFTCDL--------PGVEPMNIVVKMSACNGHPVAKISD 233 (255) T ss_dssp HHTCCGGGSEEEECSSCCHHHHHHHHHHHTTTSEEEEEECHHHHSCC--------TTCCCCCEEEEEEEETTEECCCCCS T ss_pred HCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCEEECCCCEEEECC--------CCCCCCCEEEEEEEECCEEEEEECC T ss_conf 86999765289972899989999999970478623542576454168--------8999752799988779975665248 Q ss_pred CCCCCCCCHHHHHHH-HHHCCC Q ss_conf 887524888999999-998096 Q gi|254780455|r 395 DPAKTTGDISEIKRY-LKIFKI 415 (418) Q Consensus 395 ~~~K~tg~~~~~~~~-~~~~~~ 415 (418) +|||+|||++.+.+| +++|+| T Consensus 234 ~pgK~t~p~~~~~~~~k~vf~i 255 (255) T d1yira1 234 TPGKAQCRDPDFIHYLKHVFQV 255 (255) T ss_dssp CC-------CHHHHHHHHHHTC T ss_pred CCCCCCCCCHHHHHHHHHHHCC T ss_conf 9755568868899999887479 No 3 >d1vlpa2 c.1.17.2 (A:150-415) Nicotinate phosphoribosyltransferase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=100.00 E-value=0 Score=516.74 Aligned_cols=253 Identities=34% Similarity=0.507 Sum_probs=225.3 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH-------HHHHHCCCCEEHHHHHHHHHHCCCCCCCCC Q ss_conf 9999999999877767426997599842443479788999999-------998421212012478899997289876752 Q gi|254780455|r 159 LYAQAKKKLWSKIIKLKNFSGLKIVDFGTRRRHSLTWQKWCIE-------ALQEGIKDSFLGTSNALLAMNYKINAIGTS 231 (418) Q Consensus 159 ~~~~~~~~~~~k~~~~~~~~~~~l~eFG~RR~~s~~~q~~~v~-------~~raa~~~gf~GTSNv~aa~~~gi~~~GTm 231 (418) .|..+..++++|++++.+ +|++++|||+|||||++||+.++. ++|+++++||+|||||++|++|||||+||| T Consensus 3 ~y~~~~~~~~~k~~~l~~-~g~~~~eFG~RR~~~~~~~~~v~q~~~~~~~~~raa~iggf~gTSNv~aa~~~gip~~GTm 81 (266) T d1vlpa2 3 DYENQLEQAEKKAETLFD-NGIRFSEFGTRRRRSLKAQDLIMQGIMKAVNGNPDRNKSLLLGTSNILFAKKYGVKPIGTV 81 (266) T ss_dssp CCTTHHHHHHHHHHHHHH-TTCCEEECCSTTCSCHHHHHHHHHHHHHHHHHSHHHHTTTEEEESBHHHHHHHTCCBCCCC T ss_pred CHHHHHHHHHHHHHHHHH-CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCH T ss_conf 878999999999999985-8997986467776773147999999999987516876276841067999997699986554 Q ss_pred CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC-CCEEEEECCCCHHHHHHHH-HHHHCCCCEEECCCCCHHHHHHHH Q ss_conf 04898764001220367865499999999996398-8659863468989999989-973100243412888878999999 Q gi|254780455|r 232 AHELPMVAAAITRTDIETQNAPYQMMQQWNRLYDD-NLLIVLPDSFGTDFFLEHA-PSWMTQWKGFRHDSASPIEGGEKI 309 (418) Q Consensus 232 aHs~v~a~~~~~~~~~~~~~~~~~a~~~~~~~yp~-~~~i~L~DTy~~~~~l~~~-~~~~~~~~GVR~DSGD~~~~~~k~ 309 (418) ||||||+|+++.+ ++++++..|++.|+++||+ +++|+|+|||+++.|++++ +....++.|||||||||+++++++ T Consensus 82 AHs~v~~~~~~~~---~~~~a~~~a~~~~vd~y~~~~~~I~l~Dt~~~~~~~~~~~~~~~~~~~GVRlDSGDl~~~~~~~ 158 (266) T d1vlpa2 82 AHEWVMGVASISE---DYLHANKNAMDCWINTFGAKNAGLALTDTFGTDDFLKSFRPPYSDAYVGVRQDSGDPVEYTKKI 158 (266) T ss_dssp CHHHHHHHHHHHT---CCTTHHHHHHHHHHHHHCGGGCCEEECCTTCHHHHHTTCCTTHHHHSCEEEECSSCHHHHHHHH T ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH T ss_conf 8999999764548---9998689999999997576456652145776889998777876432153116983789999999 Q ss_pred HHHHHHCCCCCC-CEEEEECCCCCHHHHHHHHHHH-CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC Q ss_conf 999997798811-3089973898999999999972-48973786334643146566666655677732168985757681 Q gi|254780455|r 310 IAWWKKMNCNPQ-NKFLVFSDNLDVDSIIYTYKHF-ENRVQMIFGWGTNLTNDFDGCTPYQNLQTEKLQIVCKVTKANDK 387 (418) Q Consensus 310 ~~~l~~~Gidp~-~k~iv~Sd~Ld~e~i~~l~~~~-~~~~~~~fGIGT~Lt~d~~~~~~~~~~~~~~l~~VyKlve~~g~ 387 (418) |++|++.|.+|. +|.||+||++|+|+++.|++.+ +++++|+|||||+|+|++.+..+ .+.+.|+||+||||||+||+ T Consensus 159 r~~~~~~~~~~~~~k~iI~ss~~~~E~~i~i~~~~~~ga~id~fGVGT~Lvt~~~~~s~-~~~~~p~l~~VyKLve~~G~ 237 (266) T d1vlpa2 159 SHHYHDVLKLPKFSKIICYSDSLNVEKAITYSHAAKENGMLATFGIGTNFTNDFRKKSE-PQVKSEPLNIVIKLLEVNGN 237 (266) T ss_dssp HHHHHTTSCCCTTSSEEEECSSCCHHHHHHHHHHHHHTTCEEEEEECHHHHSCEECSSS-TTSEECCCCEEEEEEEETTE T ss_pred HHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCC-CCCCCCCCCEEEEEEEECCE T ss_conf 99999816878877279980898578999999999727941223466654305765665-55679863379999987885 Q ss_pred CEEEEECCCCCCCCCHHHHHHHHHHCCCC Q ss_conf 11673268875248889999999980966 Q gi|254780455|r 388 HAVKLSDDPAKTTGDISEIKRYLKIFKIK 416 (418) Q Consensus 388 P~~KlSd~~~K~tg~~~~~~~~~~~~~~~ 416 (418) ||+|+||+|+|+|||++.++||+|+|++. T Consensus 238 P~~KlSd~~~K~T~~~~~v~r~k~~~g~~ 266 (266) T d1vlpa2 238 HAIKISDNLGKNMGDPATVKRVKEELGYT 266 (266) T ss_dssp ECCBCCSSTTCCBSCHHHHHHHHHHTTCC T ss_pred EEEEECCCCCCCCCCHHHHHHHHHHHCCC T ss_conf 44672389876569999999999970899 No 4 >d2f7fa1 c.1.17.1 (A:141-485) Putative nicotinate phosphoribosyltransferase EF2626 {Enterococcus faecalis [TaxId: 1351]} Probab=100.00 E-value=0 Score=403.67 Aligned_cols=212 Identities=22% Similarity=0.257 Sum_probs=180.5 Q ss_pred HHHHHHHHCC-CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCH Q ss_conf 9877767426-997599842443479788999999998421212012478899997289876752048987640012203 Q gi|254780455|r 168 WSKIIKLKNF-SGLKIVDFGTRRRHSLTWQKWCIEALQEGIKDSFLGTSNALLAMNYKINAIGTSAHELPMVAAAITRTD 246 (418) Q Consensus 168 ~~k~~~~~~~-~~~~l~eFG~RR~~s~~~q~~~v~~~raa~~~gf~GTSNv~aa~~~gi~~~GTmaHs~v~a~~~~~~~~ 246 (418) ++|+.|++.+ ++++++|||+||+||.+ +++.+.+|+++|||.|||||++|++||+||+|||||||||+|++ T Consensus 2 AT~a~r~~~aa~~~~v~eFG~Rr~~~~~---~~~~~~~Aa~igGf~gTSnv~aa~~~gi~~~GTmaHs~i~~~g~----- 73 (345) T d2f7fa1 2 ATKAARIKSVIGDDPLLEFGTRRAQELD---AAIWGTRAAYIGGADATSNVRAGKIFGIPVSGTHAHSLVQSYGN----- 73 (345) T ss_dssp HHHHHHHHHHHTTSCEEECCGGGSSSHH---HHHHHHHHHHHHTCCEESCHHHHHHHCCCBCCCCCHHHHHHHTS----- T ss_pred CCHHHHHHHHHCCCEEEECCCCCCCHHH---HHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHCCC----- T ss_conf 5479999997489818857886677458---99999999875687313089999873999746458799996486----- Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCH-----HHHHHHHHHHHCC--CCEEECCCCCHHHHHHHHHHHHHHCCCC Q ss_conf 67865499999999996398865986346898-----9999989973100--2434128888789999999999977988 Q gi|254780455|r 247 IETQNAPYQMMQQWNRLYDDNLLIVLPDSFGT-----DFFLEHAPSWMTQ--WKGFRHDSASPIEGGEKIIAWWKKMNCN 319 (418) Q Consensus 247 ~~~~~~~~~a~~~~~~~yp~~~~i~L~DTy~~-----~~~l~~~~~~~~~--~~GVR~DSGD~~~~~~k~~~~l~~~Gid 319 (418) +.+||++|+++||+ .+.|+||||+ +++++.+..+..+ +.|||+|||||.++++++|++||++|++ T Consensus 74 ------e~~A~~~~~~~~~~--~~~lid~~Dt~~~~~~~a~~~~~~l~~~~~~~gvR~DSGd~~~~~~~vr~~ld~~g~~ 145 (345) T d2f7fa1 74 ------DYEAFMAYAKTHRD--CVFLVDTYDTLKAGVPSAIRVAREMGDKINFLGVRIDSGDMAYISKRVREQLDEAGFT 145 (345) T ss_dssp ------HHHHHHHHHHHCSE--EEEECCSSCTTTTHHHHHHHHHHHHGGGSEEEEEEECSSCHHHHHHHHHHHHHHTTCT T ss_pred ------HHHHHHHHHHHCCC--CEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC T ss_conf ------99999999987799--7048998513677789999999997552366687778886599999999984415689 Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC-----CCEEEEEC Q ss_conf 1130899738989999999999724897378633464314656666665567773216898575768-----11167326 Q gi|254780455|r 320 PQNKFLVFSDNLDVDSIIYTYKHFENRVQMIFGWGTNLTNDFDGCTPYQNLQTEKLQIVCKVTKAND-----KHAVKLSD 394 (418) Q Consensus 320 p~~k~iv~Sd~Ld~e~i~~l~~~~~~~~~~~fGIGT~Lt~d~~~~~~~~~~~~~~l~~VyKlve~~g-----~P~~KlSd 394 (418) + +.||+|||||+++|.+|.++ +..+|+|||||+| +++.+.|++++|||||+++| .|++|+|+ T Consensus 146 ~--v~Ii~Sdglde~~I~~l~~~--~~~id~FGvGt~L---------~~~~~~p~l~~v~Klv~i~g~~g~~~p~~K~s~ 212 (345) T d2f7fa1 146 E--AKIYASNDLDENTILNLKMQ--KSKIDVWGVGTKL---------ITAYDQPALGAVFKLVSIEGEDGQMKDTIKLSS 212 (345) T ss_dssp T--CEEEECSSCCHHHHHHHHHT--TCCCCEEEECHHH---------HTTTTSCCCCCEEEEEEEECTTSSEEECCCCCS T ss_pred C--EEEEEECCCCHHHHHHHHHC--CCCEEEEECCCCE---------EECCCCCCCCCHHCCEEECCCCCCEEEEEEECC T ss_conf 6--18998189899999999975--9943586157621---------224799964451100002178874565465458 Q ss_pred CCCCCC--CCHHHHHH Q ss_conf 887524--88899999 Q gi|254780455|r 395 DPAKTT--GDISEIKR 408 (418) Q Consensus 395 ~~~K~t--g~~~~~~~ 408 (418) +++|.| |.++.+|. T Consensus 213 ~~~K~t~pG~K~v~R~ 228 (345) T d2f7fa1 213 NAEKVTTPGKKQVWRI 228 (345) T ss_dssp STTSSCCCSCEEEEEE T ss_pred CCCCCCCCCCEEEEEE T ss_conf 9887478877069998 No 5 >d1ytda1 c.1.17.1 (A:120-389) Nicotinate phosphoribosyltransferase Ta1145 {Thermoplasma acidophilum [TaxId: 2303]} Probab=100.00 E-value=0 Score=358.68 Aligned_cols=198 Identities=15% Similarity=0.141 Sum_probs=163.4 Q ss_pred HHHHHHH-CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHH Q ss_conf 8777674-269975998424434797889999999984212120124788999972898767520489876400122036 Q gi|254780455|r 169 SKIIKLK-NFSGLKIVDFGTRRRHSLTWQKWCIEALQEGIKDSFLGTSNALLAMNYKINAIGTSAHELPMVAAAITRTDI 247 (418) Q Consensus 169 ~k~~~~~-~~~~~~l~eFG~RR~~s~~~q~~~v~~~raa~~~gf~GTSNv~aa~~~gi~~~GTmaHs~v~a~~~~~~~~~ 247 (418) +|++|++ ++.+++++|||+||+||.++ ++ ..++++++||.|||||++|++||+||+|||||||||+|+.. T Consensus 2 Tka~r~~~aA~~~~l~eFG~Rr~~~~~~---~~-~~raa~iggf~gTSnv~a~~~~g~~~~GT~aHs~i~~~g~~----- 72 (270) T d1ytda1 2 TKASKVRLAAGDSPFFSFGIRRMHPAIS---PM-IDRSAYIGGADGVSGILGAKLIDQDPVGTMPHALSIMLGDE----- 72 (270) T ss_dssp HHHHHHHHHHTTSCEEECCGGGSCGGGH---HH-HHHHHHHHTCSEECCHHHHHHHTSCCCCCCCHHHHHHHCHH----- T ss_pred CHHHHHHHHHCCCEEEECCCCCCCHHHH---HH-HHHHEEECCCEEEEHHHHHHHCCCCCCCCCHHHHHHHCCCH----- T ss_conf 6689999861889388578877797789---98-41111555840261799998709997565111788866889----- Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHH-HHHHHHCCCCEEECCC-----CCHHHHHHHHHHHHHHCCCCCC Q ss_conf 786549999999999639886598634689899999-8997310024341288-----8878999999999997798811 Q gi|254780455|r 248 ETQNAPYQMMQQWNRLYDDNLLIVLPDSFGTDFFLE-HAPSWMTQWKGFRHDS-----ASPIEGGEKIIAWWKKMNCNPQ 321 (418) Q Consensus 248 ~~~~~~~~a~~~~~~~yp~~~~i~L~DTy~~~~~l~-~~~~~~~~~~GVR~DS-----GD~~~~~~k~~~~l~~~Gidp~ 321 (418) ..+...+...||+.++|+|+|||++..+.. .....+.++.|||+|| ||+.++++++|+.||+.|++ T Consensus 73 ------~~~~~~~~~~~~~~~~i~LvDtyd~~~~~~~~~~~~~~~~~gvR~ds~r~dsGd~~~l~~~~r~~Ld~~G~~-- 144 (270) T d1ytda1 73 ------EAWKLTLENTKNGQKSVLLIDTYMDEKFAAIKIAEMFDKVDYIRLDTPSSRRGNFEALIREVRWELALRGRS-- 144 (270) T ss_dssp ------HHHHHHHHTCCSSCCCEEECCSSSCHHHHHHHHHTTCSCCCEEEECCCGGGCSCHHHHHHHHHHHHHHTTCT-- T ss_pred ------HHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC-- T ss_conf ------999999997077876278886527406778999999998277558886998787899999999853824788-- Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCC Q ss_conf 308997389899999999997248973786334643146566666655677732168985757681116732688752 Q gi|254780455|r 322 NKFLVFSDNLDVDSIIYTYKHFENRVQMIFGWGTNLTNDFDGCTPYQNLQTEKLQIVCKVTKANDKHAVKLSDDPAKT 399 (418) Q Consensus 322 ~k~iv~Sd~Ld~e~i~~l~~~~~~~~~~~fGIGT~Lt~d~~~~~~~~~~~~~~l~~VyKlve~~g~P~~KlSd~~~K~ 399 (418) .+.||+||||||++|.+|.++ .+++|||||+|+| .|++++||||||+||+|++|.|..|||- T Consensus 145 ~vkIi~S~glde~~I~~l~~~----~~d~fGvGt~Lvt------------~~~l~~v~Klvei~G~p~~K~~~~pG~K 206 (270) T d1ytda1 145 DIKIMVSGGLDENTVKKLREA----GAEAFGVGTSISS------------AKPFDFAMDIVEVNGKPETKRGKMSGRK 206 (270) T ss_dssp TSEEEEESSCCHHHHHHHHHH----TCCEEEECHHHHT------------CCCCCEEEEEEEETTEECCCTTSCCSCE T ss_pred CCEEEECCCCCHHHHHHHHHC----CCCEEEECCCCCC------------CCCCCEEEEEEECCCEECCCCCCCCCCC T ss_conf 625897799899999999963----8866965452045------------8877858874200892233346888764 No 6 >d2i14a1 c.1.17.1 (A:111-389) Nicotinate-nucleotide pyrophosphorylase PF1904 {Pyrococcus furiosus [TaxId: 2261]} Probab=100.00 E-value=2.8e-45 Score=326.70 Aligned_cols=197 Identities=17% Similarity=0.127 Sum_probs=165.0 Q ss_pred HHHHHHHH-CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCH Q ss_conf 98777674-26997599842443479788999999998421212012478899997289876752048987640012203 Q gi|254780455|r 168 WSKIIKLK-NFSGLKIVDFGTRRRHSLTWQKWCIEALQEGIKDSFLGTSNALLAMNYKINAIGTSAHELPMVAAAITRTD 246 (418) Q Consensus 168 ~~k~~~~~-~~~~~~l~eFG~RR~~s~~~q~~~v~~~raa~~~gf~GTSNv~aa~~~gi~~~GTmaHs~v~a~~~~~~~~ 246 (418) ++|+.|++ ++++.+++|||+||+||.. +++ ..+|+++|||.|||||+++++||+|++|||+|||||+|+. T Consensus 6 AT~a~r~~~aa~~~~~~~fG~Rr~~~~~---~~~-~~~Aa~igG~~gtSnv~a~~~~g~~~~Gt~~Hs~i~~~~~----- 76 (279) T d2i14a1 6 ATAALRIKIAAKFKPVYSFGIRHMHPAI---APM-IDRAAFIGGCDGVSGVLGAEMMGEKAVGTMPHALIITVGD----- 76 (279) T ss_dssp HHHHHHHHHHTTTCCEEECGGGGSCGGG---HHH-HHHHHHHTTCSEESBHHHHHHHTCCCCCCCCHHHHHHHTC----- T ss_pred HHHHHHHHHHCCCCEEEECCCCCCCHHH---HHH-HCCCEEEECEEEEEHHHHHHHCCCCCCCCCHHHHHHHCCC----- T ss_conf 9999999996198828976788888436---877-2774899076004169999776996322026789985176----- Q ss_pred HHHHHHHHHHHHHHHHHCCCC-CEEEEECCCC--HHHHHHHHHHHHCCCCEEECCCC-----CHHHHHHHHHHHHHHCCC Q ss_conf 678654999999999963988-6598634689--89999989973100243412888-----878999999999997798 Q gi|254780455|r 247 IETQNAPYQMMQQWNRLYDDN-LLIVLPDSFG--TDFFLEHAPSWMTQWKGFRHDSA-----SPIEGGEKIIAWWKKMNC 318 (418) Q Consensus 247 ~~~~~~~~~a~~~~~~~yp~~-~~i~L~DTy~--~~~~l~~~~~~~~~~~GVR~DSG-----D~~~~~~k~~~~l~~~Gi 318 (418) +.+||++|++.||++ +.++|+||+. ..++.+.+..+..++.|||+||| |+.++++++|++||++|+ T Consensus 77 ------e~~Af~~~~~~~~~~~~~i~lvdt~~~~~~~~~~~~~~~~~~~~gvRlDSg~p~~gdl~~l~~~~r~~ld~~G~ 150 (279) T d2i14a1 77 ------QVKAWKYFDEVIEEEVPRIALVDTFYDEKVEAVMAAEALGKKLFAVRLDTPSSRRGNFRKIIEEVRWELKVRGY 150 (279) T ss_dssp ------HHHHHHHHHHHSCSSSCCEEECCSSBCHHHHHHHHHTTTGGGCCEEEECCCTTTCSCHHHHHHHHHHHHHHTTC T ss_pred ------HHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC T ss_conf ------79999999996675785699999702207889999998420104310466684300299999999997531488 Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCC Q ss_conf 81130899738989999999999724897378633464314656666665567773216898575768111673268875 Q gi|254780455|r 319 NPQNKFLVFSDNLDVDSIIYTYKHFENRVQMIFGWGTNLTNDFDGCTPYQNLQTEKLQIVCKVTKANDKHAVKLSDDPAK 398 (418) Q Consensus 319 dp~~k~iv~Sd~Ld~e~i~~l~~~~~~~~~~~fGIGT~Lt~d~~~~~~~~~~~~~~l~~VyKlve~~g~P~~KlSd~~~K 398 (418) + .+.|++||||||++|.++.+ .+|+|||||.| ++ .|++++|||+||+||+|++|.|..||+ T Consensus 151 ~--~v~IiaSgglde~~I~~l~~-----~iD~fGvGt~l---------~t---~~~l~~~~klve~~g~p~~K~~~~pG~ 211 (279) T d2i14a1 151 D--WVKIFVSGGLDEEKIKEIVD-----VVDAFGVGGAI---------AS---AKPVDFALDIVEVEGKPIAKRGKLSGR 211 (279) T ss_dssp C--SCEEEEESSCCHHHHHTTGG-----GCSEEEECHHH---------HT---CCCCCCEEEEEEETTEECCCTTSCCSC T ss_pred C--CEEEEEECCCCHHHHHHHHH-----CCCEECCCCCC---------CC---CCCCCEEEEEEEECCEEECCCCCCCCC T ss_conf 8--41899969989999999873-----03572256631---------46---897663656851789270214578988 No 7 >d1ybea2 d.41.2.2 (A:8-167) Nicotinate phosphoribosyltransferase, N-terminal domain {Agrobacterium tumefaciens [TaxId: 358]} Probab=100.00 E-value=1.7e-44 Score=321.61 Aligned_cols=143 Identities=61% Similarity=1.139 Sum_probs=137.8 Q ss_pred CCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC Q ss_conf 56710012440117899999999984899659999996588755440000236999999997169998999999837775 Q gi|254780455|r 7 TSDPIISSLLDTDFYKILMLQLIWKFYPDIKVTFSLFNRQTQLHLSDKIDESELRTQLDHVRSLRITEKERKWLVENSFY 86 (418) Q Consensus 7 ~~~piI~SlLdTD~YkltM~~a~~~~~~~~~v~f~~~~R~~~~~~~~~~v~~gL~~~i~~l~~~rft~eei~yL~~~~~~ 86 (418) .-+|||+||||||+|||||+|||||++|+++|+|+||||++++++++|++++||+++|++|+++|||++|++||++.+++ T Consensus 16 ~~~piI~SlLdTDlYklTM~qa~~~~~~~~~a~f~f~~R~~~~~~~~~~~~~gL~~~i~~l~~lrFt~eei~yL~~~~~~ 95 (160) T d1ybea2 16 KLDPIVRSLIDTDFYKLLMLQMIWKLYPEVDATFSLINRTKTVRLAEEIDEMELREQLDHARTLRLSKKENIWLAGNTFY 95 (160) T ss_dssp CCCCSCCCTTCSBHHHHHHHHHHHHHCTTCBEEEEEEESCCSSCSTTTSCHHHHHHHHHHHTTCCCCHHHHHHHHHSCSS T ss_pred CCCHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC T ss_conf 88665512543188999999999986899759999997899864236899999999999998679999999999846885 Q ss_pred CCCCCCCHHHHHHHHHCCCCCCEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 555578988999975089984168733992699985487786778889999998888877531 Q gi|254780455|r 87 GKKQLFEPKFLSWLSDFQLPEYDLSHKKGQYVLNFHGLWKDVTLWEIPSLIIISTLYSRITVR 149 (418) Q Consensus 87 ~~~~~~~~~fl~~L~~~~f~~~~~~~~eg~~~i~ieGp~~~~~l~EtplL~iine~~~~~~~~ 149 (418) .+.+.|+++|++||++++|++.++++++|+++|+|+|||.+|||||||||+||||+|+++... T Consensus 96 ~~~~~f~~~fl~~L~~f~f~~~~~~~~eG~l~i~V~GP~~~~~L~EtplLaIInE~~~r~~~~ 158 (160) T d1ybea2 96 GRSQIFEPEFLSWLSSYQLPEYELFKRDGQYELNFHGRWMDTTLWEIPALSIINELRSRSAMR 158 (160) T ss_dssp SCSCCSCHHHHHHHHTCCCCCCEEEECSSCEEEEECSBHHHHGGGHHHHHHHHHHHHHHHHHT T ss_pred CCCCCCCHHHHHHHHCCCCCCEEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 556767989999971478996089965993899999889999999999999999999998861 No 8 >d1vlpa1 d.41.2.2 (A:1-149) Nicotinate phosphoribosyltransferase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=100.00 E-value=7e-41 Score=296.71 Aligned_cols=135 Identities=32% Similarity=0.490 Sum_probs=120.9 Q ss_pred CCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC Q ss_conf 67100124401178999999999848996599999965887554400002369999999971699989999998377755 Q gi|254780455|r 8 SDPIISSLLDTDFYKILMLQLIWKFYPDIKVTFSLFNRQTQLHLSDKIDESELRTQLDHVRSLRITEKERKWLVENSFYG 87 (418) Q Consensus 8 ~~piI~SlLdTD~YkltM~~a~~~~~~~~~v~f~~~~R~~~~~~~~~~v~~gL~~~i~~l~~~rft~eei~yL~~~~~~~ 87 (418) ++|||+|+||||+|||||+||||+++|+++|+|+||+|++| ..++|.+++||+++|++|+++|||++|++||++.+ T Consensus 2 ~~pii~SlLdTDlYklTM~qa~~~~~~~~~a~f~~~~R~~p-~~~~~~~~~gl~~~i~~l~~lrFt~eel~yL~~~~--- 77 (149) T d1vlpa1 2 SEPVIKSLLDTDMYKITMHAAVFTNFPDVTVTYKYTNRSSQ-LTFNKEAINWLKEQFSYLGNLRFTEEEIEYLKQEI--- 77 (149) T ss_dssp CCCSCCCTTSSBHHHHHHHHHHHHHCTTCEEEEEEEESCTT-CCBCHHHHHHHHHHHHHGGGCCCCHHHHHHHHHHC--- T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC-CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC--- T ss_conf 97523433311889999999999868997699999973899-87417899999999999986799999999998738--- Q ss_pred CCCCCCHHHHHHHHHCCCCCC------EEE------ECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 555789889999750899841------687------3399269998548778677888999999888887753 Q gi|254780455|r 88 KKQLFEPKFLSWLSDFQLPEY------DLS------HKKGQYVLNFHGLWKDVTLWEIPSLIIISTLYSRITV 148 (418) Q Consensus 88 ~~~~~~~~fl~~L~~~~f~~~------~~~------~~eg~~~i~ieGp~~~~~l~EtplL~iine~~~~~~~ 148 (418) ++++++|++||+++||++. ... +.+++|.|+|+|||.+||||||||||||||+|++.+. T Consensus 78 --~~~~~~fl~~L~~~rF~~dp~~~v~~~~~~~~~~~~~~~l~i~v~Gp~~~~~L~EtplLaIinE~y~~~~d 148 (149) T d1vlpa1 78 --PYLPSAYIKYISSSNYKLHPEEQISFTSEEIEGKPTHYKLKILVSGSWKDTILYEIPLLSLISEAYFKFVD 148 (149) T ss_dssp --TTSCHHHHHHHHSTTCCCCHHHHEEEEEEEETTEEEEEEEEEEEEEEHHHHTTSHHHHHHHHHHHHHHHTC T ss_pred --CCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf --88898999999858867780002577256567667788547999857999999999999999988741036 No 9 >d1yira2 d.41.2.2 (A:4-144) Nicotinate phosphoribosyltransferase, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]} Probab=100.00 E-value=1.4e-39 Score=287.88 Aligned_cols=133 Identities=29% Similarity=0.547 Sum_probs=121.7 Q ss_pred CCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC Q ss_conf 67100124401178999999999848996599999965887554400002369999999971699989999998377755 Q gi|254780455|r 8 SDPIISSLLDTDFYKILMLQLIWKFYPDIKVTFSLFNRQTQLHLSDKIDESELRTQLDHVRSLRITEKERKWLVENSFYG 87 (418) Q Consensus 8 ~~piI~SlLdTD~YkltM~~a~~~~~~~~~v~f~~~~R~~~~~~~~~~v~~gL~~~i~~l~~~rft~eei~yL~~~~~~~ 87 (418) ++|||+||||||+|||||+||||+++|+++|+|+|++|++| +.+++ ++||+++|++|+++|||++|++||++. T Consensus 6 ~~~ii~SlLdTDlYklTM~qa~~~~~~~~~a~f~~~~R~~p-~~~~~--~~gl~~~i~~l~~lrFt~eei~yL~~~---- 78 (141) T d1yira2 6 SERIVQNLLDTDFYKLTMMQAVLHNYPNAEVEWEFRCRNQE-DLRLY--LPAIREQLEYLAGLAISDEQLAFLERI---- 78 (141) T ss_dssp CSCSSCSTTSSBHHHHHHHHHHHHHCTTCEEEEEEEETTCC-CCGGG--HHHHHHHHHHHHHCCCCHHHHHHHHTS---- T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC-CHHHH--HHHHHHHHHHHHHCCCCHHHHHHHHCC---- T ss_conf 72243130522789999999999869998699999935884-03659--999999999999679999999999718---- Q ss_pred CCCCCCHHHHHHHHHCCCCCCEEEE--CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 5557898899997508998416873--3992699985487786778889999998888877531 Q gi|254780455|r 88 KKQLFEPKFLSWLSDFQLPEYDLSH--KKGQYVLNFHGLWKDVTLWEIPSLIIISTLYSRITVR 149 (418) Q Consensus 88 ~~~~~~~~fl~~L~~~~f~~~~~~~--~eg~~~i~ieGp~~~~~l~EtplL~iine~~~~~~~~ 149 (418) ++|+++|++||++|||+++++++ .+|+|+|+|+|||.+||||||||||||||+|+++.++ T Consensus 79 --~~f~~~fldyL~~frf~~~~~~~~~~~~ep~i~v~Gp~~e~~L~Et~lL~iinE~~~~~~~p 140 (141) T d1yira2 79 --PFLAPDFIRFLGLFRFNPRYVQTGIENDEFFLRLKGPWLHVILFEVPLLAMISEVRNRARYP 140 (141) T ss_dssp --TTSCHHHHHHHHHCCCCGGGEEEEEETTEEEEEEEEEHHHHGGGHHHHHHHHHHHHHHHHCT T ss_pred --CCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf --99998999999868998659776057995889999779999999999999999989734389 No 10 >d2f7fa2 d.41.2.1 (A:4-140) Putative nicotinate phosphoribosyltransferase EF2626 {Enterococcus faecalis [TaxId: 1351]} Probab=100.00 E-value=3.7e-34 Score=250.59 Aligned_cols=123 Identities=24% Similarity=0.376 Sum_probs=112.5 Q ss_pred HH-HCCHHHHHHHHHHHHHH-CCCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC Q ss_conf 24-40117899999999984-89965999999658875544000023699999999716999899999983777555557 Q gi|254780455|r 14 SL-LDTDFYKILMLQLIWKF-YPDIKVTFSLFNRQTQLHLSDKIDESELRTQLDHVRSLRITEKERKWLVENSFYGKKQL 91 (418) Q Consensus 14 Sl-LdTD~YkltM~~a~~~~-~~~~~v~f~~~~R~~~~~~~~~~v~~gL~~~i~~l~~~rft~eei~yL~~~~~~~~~~~ 91 (418) |+ ||||+|||||+||||++ +|+++|+|++|+|++| ..++|++++||+++|++++++|||+|||+||++.+ . T Consensus 6 ~~~L~TD~YkltM~~a~~~~~~~~~~~~f~~~~R~~p-~~~~~~i~~gL~~~l~~l~~l~ft~eei~yL~~~~------~ 78 (137) T d2f7fa2 6 SLTLHTDMYQINMMQTYWELGRADLHAVFECYFREMP-FNHGYAIFAGLERLVNYLENLTFTESDIAYLREVE------E 78 (137) T ss_dssp CSTTCSCHHHHHHHHHHHHTTCTTCEEEEEEECSSCG-GGCSCEECCCHHHHHHHHHTCCCCHHHHHHHHHTS------C T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC-CCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHCC------C T ss_conf 6057778789999999998099997499999984488-77754428649999999983799999999998679------9 Q ss_pred CCHHHHHHHHHCCCCCCEEEECCCCEE------EEEECCHHHHHHHHHHHHHHHHHHH Q ss_conf 898899997508998416873399269------9985487786778889999998888 Q gi|254780455|r 92 FEPKFLSWLSDFQLPEYDLSHKKGQYV------LNFHGLWKDVTLWEIPSLIIISTLY 143 (418) Q Consensus 92 ~~~~fl~~L~~~~f~~~~~~~~eg~~~------i~ieGp~~~~~l~EtplL~iine~~ 143 (418) ++++|++||+++||++++++++||+++ |+|+|||.+|||||||||+|||..+ T Consensus 79 ~~~~fl~~L~~~~~~~~i~av~EG~~v~~~ep~l~I~Gp~~~~~L~Et~lL~iin~~s 136 (137) T d2f7fa2 79 YPEDFLTYLANFEFKCTVRSALEGDLVFNNEPLIQIEGPLAQCQLVETALLNMVNFQT 136 (137) T ss_dssp CCHHHHHHHHTCCCCCEEEECCTTCEECTTSCSEEEEEEHHHHHHHHHHHHHHHHHHH T ss_pred CCHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHCCCC T ss_conf 9889999998389873599855885235990789999749999999999999966342 No 11 >d1ytda2 d.41.2.1 (A:1-119) Nicotinate phosphoribosyltransferase Ta1145 {Thermoplasma acidophilum [TaxId: 2303]} Probab=99.86 E-value=6.4e-23 Score=173.56 Aligned_cols=118 Identities=18% Similarity=0.160 Sum_probs=97.5 Q ss_pred CCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHH Q ss_conf 95225656710012440117899999999984899659999996588755440000236999999997169998999999 Q gi|254780455|r 1 MKEYFSTSDPIISSLLDTDFYKILMLQLIWKFYPDIKVTFSLFNRQTQLHLSDKIDESELRTQLDHVRSLRITEKERKWL 80 (418) Q Consensus 1 m~~~~~~~~piI~SlLdTD~YkltM~~a~~~~~~~~~v~f~~~~R~~~~~~~~~~v~~gL~~~i~~l~~~rft~eei~yL 80 (418) ||++-+.++.-|.|.|.||+|++||+|++|+++++.+|+|+||+|+++ ++|++++||++++++++++|| +++|| T Consensus 1 m~~~~~a~~~~I~~gl~TD~Y~l~m~~~~~~~g~~~~v~~e~f~r~~~---~~~~v~aGlee~l~~l~~~~~---~i~~L 74 (119) T d1ytda2 1 MNVFNTASDEDIKKGLASDVYFERTISAIGDKCNDLRVAMEATVSGPL---DTWINFTGLDEVLKLLEGLDV---DLYAI 74 (119) T ss_dssp CCSSSCCCHHHHHHTCSSCHHHHHHHHHHGGGGGGCEEEEEEEECSCC---SSCEECCCHHHHHHHHTTSSE---EEEEC T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCC---CCEEHHHHHHHHHHHHHCCCC---EEEEC T ss_conf 963135798898533678899999999999719997299999993698---703043679999987507762---88771 Q ss_pred HHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH Q ss_conf 8377755555789889999750899841687339926999854877867788899999988888 Q gi|254780455|r 81 VENSFYGKKQLFEPKFLSWLSDFQLPEYDLSHKKGQYVLNFHGLWKDVTLWEIPSLIIISTLYS 144 (418) Q Consensus 81 ~~~~~~~~~~~~~~~fl~~L~~~~f~~~~~~~~eg~~~i~ieGp~~~~~l~EtplL~iine~~~ 144 (418) ++...+ ++ .-.+.+++|+++|+|||.++|+|||+||++||..+. T Consensus 75 ~eg~~~------~~--------------ge~~f~~ePvl~I~Gp~~e~~llET~lL~iln~~S~ 118 (119) T d1ytda2 75 PEGTIL------FP--------------RDANGLPVPFIRVEGRYCDFGMYETAILGFICQASG 118 (119) T ss_dssp CTTCEE------CS--------------BCTTSCBCEEEEEEEEHHHHGGGHHHHHHHHHHHHH T ss_pred CCCCEE------CC--------------CCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCC T ss_conf 667506------89--------------973679983799996399999999999998754213 No 12 >d2i14a2 d.41.2.1 (A:1-110) Nicotinate-nucleotide pyrophosphorylase PF1904 {Pyrococcus furiosus [TaxId: 2261]} Probab=99.77 E-value=1e-18 Score=144.72 Aligned_cols=110 Identities=14% Similarity=0.069 Sum_probs=90.9 Q ss_pred CCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHH Q ss_conf 95225656710012440117899999999984899659999996588755440000236999999997169998999999 Q gi|254780455|r 1 MKEYFSTSDPIISSLLDTDFYKILMLQLIWKFYPDIKVTFSLFNRQTQLHLSDKIDESELRTQLDHVRSLRITEKERKWL 80 (418) Q Consensus 1 m~~~~~~~~piI~SlLdTD~YkltM~~a~~~~~~~~~v~f~~~~R~~~~~~~~~~v~~gL~~~i~~l~~~rft~eei~yL 80 (418) |+++++.++.-|.+-+.||.|+++|++++++.+++.+|+|++|+|++| +.+++++++||+++++++++++|+ T Consensus 1 m~~~~~a~~~~i~~g~~TD~Yfl~t~~il~~~g~~~~v~fevf~R~~p-~~~~~~v~aGl~evl~~l~~~~~~------- 72 (110) T d2i14a2 1 MKRFYIANEDEIKAGKTTDVYFLRTKKILEVKNIRKKVLADVTTTSLP-NNWRWGVLVGVEEVAKLLEGIPVN------- 72 (110) T ss_dssp CCSSSCCCHHHHHHTTTSBHHHHHHHHHHHHTTCCCEEEEEEECSCCG-GGCSCEECCCHHHHHHHHTTSSEE------- T ss_pred CCEEECCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECC-CCCCHHHHHHHHHHHHHHCCCCEE------- T ss_conf 942432786775124116999999999998517898489999997087-656328999999999984298538------- Q ss_pred HHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCEEEEEECCHHHHHHHHHHHHHHHH Q ss_conf 837775555578988999975089984168733992699985487786778889999998 Q gi|254780455|r 81 VENSFYGKKQLFEPKFLSWLSDFQLPEYDLSHKKGQYVLNFHGLWKDVTLWEIPSLIIIS 140 (418) Q Consensus 81 ~~~~~~~~~~~~~~~fl~~L~~~~f~~~~~~~~eg~~~i~ieGp~~~~~l~EtplL~iin 140 (418) ..--++...+.+++|+++|+||+.+++++||++|+||+ T Consensus 73 ----------------------i~a~~EG~~v~~~ePvl~I~Gp~~~~~~lET~lL~ila 110 (110) T d2i14a2 73 ----------------------VYAMPEGTIFHPYEPVLQIEGDYADFGIYETALLGMLS 110 (110) T ss_dssp ----------------------EEECCTTCEECTTSCSEEEEEEHHHHGGGHHHHHHHHH T ss_pred ----------------------EEECCCCCEECCCCCEEEEEECHHHHHHHHHHHHHHHC T ss_conf ----------------------99849977856998789999739999999999887319 No 13 >d1qpoa2 d.41.2.1 (A:2-116) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Probab=49.54 E-value=6.2 Score=15.92 Aligned_cols=97 Identities=16% Similarity=0.160 Sum_probs=59.4 Q ss_pred CCCCHHHHCCHHH---HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCC Q ss_conf 7100124401178---9999999998489965999999658875544000023699999999716999899999983777 Q gi|254780455|r 9 DPIISSLLDTDFY---KILMLQLIWKFYPDIKVTFSLFNRQTQLHLSDKIDESELRTQLDHVRSLRITEKERKWLVENSF 85 (418) Q Consensus 9 ~piI~SlLdTD~Y---kltM~~a~~~~~~~~~v~f~~~~R~~~~~~~~~~v~~gL~~~i~~l~~~rft~eei~yL~~~~~ 85 (418) ..+|+..|.-|+. -+|-. +.+ -++..++..+..|.+ .|++|++..-.-++. +-. T Consensus 11 ~~~i~~aL~EDlg~g~DiTt~-~li--~~~~~~~A~i~ake~-------gVlaG~~~~~~if~~----------l~~--- 67 (115) T d1qpoa2 11 RAAIARGLDEDLRYGPDVTTL-ATV--PASATTTASLVTREA-------GVVAGLDVALLTLNE----------VLG--- 67 (115) T ss_dssp HHHHHHHHHHHHTTCCCHHHH-HHS--CTTCEEEEEEEESSC-------EECCCHHHHHHHHHH----------HHC--- T ss_pred HHHHHHHHHCCCCCCCCCCCH-HHC--CCCCEEEEEEEECCC-------CCEEHHHHHHHHHHH----------HCC--- T ss_conf 999999997059999885844-126--888749999998798-------852319999999999----------624--- Q ss_pred CCCCCCCCHHHHHHHHHCCC---CCCEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHH Q ss_conf 55555789889999750899---8416873399269998548778677888999999888 Q gi|254780455|r 86 YGKKQLFEPKFLSWLSDFQL---PEYDLSHKKGQYVLNFHGLWKDVTLWEIPSLIIISTL 142 (418) Q Consensus 86 ~~~~~~~~~~fl~~L~~~~f---~~~~~~~~eg~~~i~ieGp~~~~~l~EtplL~iine~ 142 (418) -.++++ -.+.-.+.+|+.+++|+||-.....-|=.+||++..+ T Consensus 68 --------------~~~i~~~~~~~DG~~v~~G~~I~~i~G~a~~iL~~ER~~LN~lq~l 113 (115) T d1qpoa2 68 --------------TNGYRVLDRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHL 113 (115) T ss_dssp --------------TTSEEEEEECCTTCEECTTCEEEEEEEEHHHHHHHHHHHHHHHHHH T ss_pred --------------CCCCCEEEECCCCCEEECCEEEEEEECHHHHHHHHHHHHHHHHHHC T ss_conf --------------4440013404787887224049998322999999999999999860 No 14 >d1o4ua1 c.1.17.1 (A:104-273) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Thermotoga maritima [TaxId: 2336]} Probab=45.27 E-value=7.2 Score=15.48 Aligned_cols=101 Identities=15% Similarity=0.105 Sum_probs=58.7 Q ss_pred HHHHHHHHCCC-CCEEEEECCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHH Q ss_conf 99999996398-86598634689899999899731002434128888789999999999977988113089973898999 Q gi|254780455|r 256 MMQQWNRLYDD-NLLIVLPDSFGTDFFLEHAPSWMTQWKGFRHDSASPIEGGEKIIAWWKKMNCNPQNKFLVFSDNLDVD 334 (418) Q Consensus 256 a~~~~~~~yp~-~~~i~L~DTy~~~~~l~~~~~~~~~~~GVR~DSGD~~~~~~k~~~~l~~~Gidp~~k~iv~Sd~Ld~e 334 (418) ++...-+..|. ..-..-+||. ..+. .....+.+.|-+|-.+|... +++.+.++..+ |+ ..|-+|+|++++ T Consensus 67 ~~~~~~~~~~~~~~I~VEv~~~--~e~~---~a~~~g~d~i~LDn~~pe~~-k~~~~~lk~~~--~~-i~lEaSGGI~~~ 137 (170) T d1o4ua1 67 AVQEVRKIIPFTTKIEVEVENL--EDAL---RAVEAGADIVMLDNLSPEEV-KDISRRIKDIN--PN-VIVEVSGGITEE 137 (170) T ss_dssp HHHHHHTTSCTTSCEEEEESSH--HHHH---HHHHTTCSEEEEESCCHHHH-HHHHHHHHHHC--TT-SEEEEEECCCTT T ss_pred HHHHHHHHCCCCCEEEEEECCH--HHHH---HHHHCCCCEEEECCCCHHHH-HHHHHHHHHHC--CC-EEEEEECCCCHH T ss_conf 9999885179885699970839--9999---98845755999857572667-67999998608--96-799987899999 Q ss_pred HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEE Q ss_conf 99999997248973786334643146566666655677732168985 Q gi|254780455|r 335 SIIYTYKHFENRVQMIFGWGTNLTNDFDGCTPYQNLQTEKLQIVCKV 381 (418) Q Consensus 335 ~i~~l~~~~~~~~~~~fGIGT~Lt~d~~~~~~~~~~~~~~l~~VyKl 381 (418) .+.+. ....+|..-+| .||+ +.|++++-.++ T Consensus 138 ni~~~----a~~GVD~Is~g-~lt~-----------~a~~~Disl~i 168 (170) T d1o4ua1 138 NVSLY----DFETVDVISSS-RLTL-----------QEVFVDLSLEI 168 (170) T ss_dssp TGGGG----CCTTCCEEEEG-GGTS-----------SCCCCCEEEEE T ss_pred HHHHH----HHCCCCEEECC-CCCC-----------CCCCCCEEEEE T ss_conf 99999----97599999868-0226-----------99876617887 No 15 >d1z3ea1 c.47.1.12 (A:1-114) Regulatory protein Spx {Bacillus subtilis [TaxId: 1423]} Probab=45.03 E-value=6.6 Score=15.72 Aligned_cols=39 Identities=21% Similarity=0.253 Sum_probs=30.2 Q ss_pred HHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHH Q ss_conf 9999999999977988113089973898999999999972 Q gi|254780455|r 304 EGGEKIIAWWKKMNCNPQNKFLVFSDNLDVDSIIYTYKHF 343 (418) Q Consensus 304 ~~~~k~~~~l~~~Gidp~~k~iv~Sd~Ld~e~i~~l~~~~ 343 (418) .-++++.++|++.|+++.- .-+..+.++++.+..+.+.. T Consensus 11 ~~~rka~~~L~~~~i~~~~-~d~~~~p~s~~eL~~ll~~~ 49 (114) T d1z3ea1 11 TSCRKARAWLEEHEIPFVE-RNIFSEPLSIDEIKQILRMT 49 (114) T ss_dssp HHHHHHHHHHHHTTCCEEE-EETTTSCCCHHHHHHHHHTC T ss_pred HHHHHHHHHHHHCCCCEEE-EEEECCCCCHHHHHHHHHHH T ss_conf 7999999999987998499-86102589989999998870 No 16 >d1qapa2 d.41.2.1 (A:8-129) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain {Salmonella typhimurium [TaxId: 90371]} Probab=38.43 E-value=9.1 Score=14.78 Aligned_cols=35 Identities=20% Similarity=0.128 Sum_probs=28.6 Q ss_pred CEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHH Q ss_conf 16873399269998548778677888999999888 Q gi|254780455|r 108 YDLSHKKGQYVLNFHGLWKDVTLWEIPSLIIISTL 142 (418) Q Consensus 108 ~~~~~~eg~~~i~ieGp~~~~~l~EtplL~iine~ 142 (418) +.-.+.+|+.+++|+||-..-...|=.+||++..+ T Consensus 86 DG~~v~~G~~i~~i~G~a~~IL~~ER~~LN~lqrl 120 (122) T d1qapa2 86 DGDAIHANQTVFELQGPARVLLTGERTALNFVQTL 120 (122) T ss_dssp TTCEECTTCEEEEEEEEHHHHHHHHHHHHHHHHHH T ss_pred CCCEEECCCEEEEEEECHHHHHHHHHHHHHHHHHH T ss_conf 73278648469999871899999999999999872 No 17 >d1o4ua2 d.41.2.1 (A:1-103) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain {Thermotoga maritima [TaxId: 2336]} Probab=29.64 E-value=12 Score=13.84 Aligned_cols=35 Identities=11% Similarity=-0.025 Sum_probs=28.0 Q ss_pred CEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHH Q ss_conf 16873399269998548778677888999999888 Q gi|254780455|r 108 YDLSHKKGQYVLNFHGLWKDVTLWEIPSLIIISTL 142 (418) Q Consensus 108 ~~~~~~eg~~~i~ieGp~~~~~l~EtplL~iine~ 142 (418) +.-.+.+|+.+++++|+-......|=.+||++..+ T Consensus 67 dG~~v~~g~~I~~i~G~a~~iL~~ER~~LN~Lq~l 101 (103) T d1o4ua2 67 DGEYLEGTGVIGEIEGNTYKLLVAERTLLNVLSVM 101 (103) T ss_dssp TTCEEESCEEEEEEEEEHHHHHHHHHHHHHHHHHH T ss_pred CCCEEECCCEEEEEECCHHHHHHHHHHHHHHHHHH T ss_conf 79987759459999551999999999999999986 No 18 >d1rw1a_ c.47.1.12 (A:) Hypothetical protein PA3664 (YffB) {Pseudomonas aeruginosa [TaxId: 287]} Probab=27.93 E-value=13 Score=13.64 Aligned_cols=38 Identities=8% Similarity=-0.007 Sum_probs=27.5 Q ss_pred HHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHH Q ss_conf 999999999977988113089973898999999999972 Q gi|254780455|r 305 GGEKIIAWWKKMNCNPQNKFLVFSDNLDVDSIIYTYKHF 343 (418) Q Consensus 305 ~~~k~~~~l~~~Gidp~~k~iv~Sd~Ld~e~i~~l~~~~ 343 (418) -++++.++|++.|+++.- .-+.-+.++.+.+..+.+.. T Consensus 12 ~srka~~~L~~~~i~~~~-idy~k~pls~~eL~~ll~~~ 49 (114) T d1rw1a_ 12 TMKKARTWLDEHKVAYDF-HDYKAVGIDREHLRRWCAEH 49 (114) T ss_dssp HHHHHHHHHHHTTCCEEE-EEHHHHCCCHHHHHHHHHHH T ss_pred HHHHHHHHHHHCCCCEEE-EECCCCCCCHHHHHHHHHHC T ss_conf 899999999976997699-97125699999999998751 No 19 >d1lvaa3 a.4.5.35 (A:511-574) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]} Probab=27.10 E-value=9.2 Score=14.74 Aligned_cols=47 Identities=15% Similarity=0.001 Sum_probs=34.9 Q ss_pred CCCHHHHHHHHHHHHHHCCCCCC-CEEEEECCCCCHHHHHHHHHHHCC Q ss_conf 88878999999999997798811-308997389899999999997248 Q gi|254780455|r 299 SASPIEGGEKIIAWWKKMNCNPQ-NKFLVFSDNLDVDSIIYTYKHFEN 345 (418) Q Consensus 299 SGD~~~~~~k~~~~l~~~Gidp~-~k~iv~Sd~Ld~e~i~~l~~~~~~ 345 (418) |.|...+-+++...|.+.|+.|- -+-+.-.-++++..+..+.+.... T Consensus 2 s~~q~~l~~~I~~~~~~~g~~PP~vrdl~~~l~~~e~~~~~lL~~l~~ 49 (64) T d1lvaa3 2 SETQKKLLKDLEDKYRVSRWQPPSFKEVAGSFNLDPSELEELLHYLVR 49 (64) T ss_dssp CHHHHHHHHHHHHHHHHHTTSCCBHHHHHHHTTCCHHHHHHHHHHHHH T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH T ss_conf 889999999999999986999995999998919999999999999997 No 20 >d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]} Probab=26.70 E-value=14 Score=13.50 Aligned_cols=75 Identities=9% Similarity=-0.037 Sum_probs=50.9 Q ss_pred HHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCC Q ss_conf 89999989973100243412888878999999999997798811308997389899999999997248973786334643 Q gi|254780455|r 278 TDFFLEHAPSWMTQWKGFRHDSASPIEGGEKIIAWWKKMNCNPQNKFLVFSDNLDVDSIIYTYKHFENRVQMIFGWGTNL 357 (418) Q Consensus 278 ~~~~l~~~~~~~~~~~GVR~DSGD~~~~~~k~~~~l~~~Gidp~~k~iv~Sd~Ld~e~i~~l~~~~~~~~~~~fGIGT~L 357 (418) .+.+.+.+........|+=.-+|.-..+..++++.+++.|.++ ..++..+-+-.+....|.+. | ...+||=||.+ T Consensus 77 ~e~iv~aa~~~~advI~iSs~~~~~~~~~~~l~~~L~~~g~~~--v~VivGG~ip~~d~~~l~~~--G-v~~iF~pgt~~ 151 (168) T d7reqa2 77 PEETARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPD--ILITVGGVIPEQDFDELRKD--G-AVEIYTPGTVI 151 (168) T ss_dssp HHHHHHHHHHHTCSEEEEEECSSCHHHHHHHHHHHHHHTTCTT--SEEEEEESCCGGGHHHHHHH--T-EEEEECTTCCH T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC--EEEEEECCCCHHHHHHHHHC--C-CCEEECCCCCH T ss_conf 8999999971599889995576533679999999998569997--18998389898999999968--9-78797968987 Done!