HHsearch alignment for GI: 254780456 and conserved domain: PRK06299
>PRK06299 rpsA 30S ribosomal protein S1; Reviewed.
Probab=100.00 E-value=0 Score=986.06 Aligned_cols=554 Identities=55% Similarity=0.924 Sum_probs=538.4
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCEEEEEECCCEEEEEEHHHHCCCCCCCCCCCCCEEEEEEEEEECCCC
Q ss_conf 06889999885402146389877999999981998999947960367899750566435563789879999999747998
Q gi|254780456|r 7 SREDFATLLEESFTKKDLAENCVTKGIVVGLEKDTVVVDVGLKFEGRIPRREFMGKGQYTPIKVGDEVEVYVERTENSFG 86 (576)
Q Consensus 7 ~~~~f~~ll~~~~~~~~~~~G~iv~G~V~~i~~~~v~vdig~k~~G~i~~~e~~~~~~~~~~kvGd~i~v~V~~~~~~~g 86 (576)
T Consensus 1 ~~e~F~~Lle~s~~~~~~~~G~iV~G~Vv~i~~~~v~VdiG~K~eG~I~~~E~~~~~~~~~~~vGd~i~v~v~~~~d~~G 80 (556)
T PRK06299 1 MTESFAALLEESLKEEELREGSIVKGTVVAIDKDYVLVDVGLKSEGRIPLEEFKNDQGELEVKVGDEVEVYLERIEDGFG 80 (556)
T ss_pred CCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCEEEEEECCCCEEEEEHHHHCCCCCCCCCCCCCEEEEEEEEEECCCC
T ss_conf 96479999974234457889998999999997999999968883578799993477677467999999999999878897
Q ss_pred EEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCC
Q ss_conf 59996878755575899999852897699999999679559997440200000112345433345555530231113354
Q gi|254780456|r 87 EAVFSRDKALREGVWEKIEAKFRAGERIEGVIFNQVKGGMTVDLNGEVAFLPRSQIDIRPVRDVTPLMHEPQLFEILKMD 166 (576)
Q Consensus 87 ~i~lS~~k~~~~~~~~~i~~a~~~g~~v~g~V~~~~k~G~~V~i~gi~~FlP~s~~~~~~~~d~~~~vG~~i~~~Ii~~d 166 (576)
T Consensus 81 ~i~LS~~ka~~~~~w~~l~~a~e~~~~v~g~i~~~vKGG~~V~i~gv~aFlP~Sq~d~~~v~d~~~~vG~~l~~kIi~~d 160 (556)
T PRK06299 81 ETVLSREKAKRLEAWDKLEEAYENGEIVEGVINGKVKGGFTVDLNGVRAFLPGSQVDVRPVRDTDPLEGKELEFKVIKLD 160 (556)
T ss_pred EEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCEEEEEECCEEEEEEHHHCCCCCCCCHHHHCCCEEEEEEEEEE
T ss_conf 49998799775788999999975898799999999778099998898999785882575556617657966999999975
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEECCCEEEEEEEECCCCCCCCCCEEECCCCE
Q ss_conf 32331122121112222212111000112223302467887531471777448315788642024444433113326972
Q gi|254780456|r 167 KRRGNIVVSRRAVLEESRAEQRSEIVQKLEEGQVIEGTVKNITDYGVFVDLSGVDGLLHVTDIAWHRILHPSKVLSIGQQ 246 (576)
Q Consensus 167 ~~~~~ivvS~k~~l~~~~~~~~~~~~~~l~~G~~v~g~V~~i~~~g~~V~~~g~~g~i~~~~ls~~~~~~~~~~~~~G~~ 246 (576)
T Consensus 161 ~~~~~iVvSrr~~lee~~~~~~~~~~~~l~~G~vv~G~V~~i~~~GaFVdlggvdGllhiseiSw~rv~~p~~~~~~G~~ 240 (556)
T PRK06299 161 KKRNNIVVSRRAVLEEERAEEREELLENLEEGQVVEGVVKNITDYGAFVDLGGVDGLLHITDISWKRVNHPSEVVNVGDE 240 (556)
T ss_pred CCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEECCEEEEEEHHHCCCCCCCCHHHHCCCCCE
T ss_conf 23580897328988888888899999852479727899999705758999589589998567155666998992668988
Q ss_pred EEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 58999987476527998521555432100000004896658999981596699985142000000111101113557421
Q gi|254780456|r 247 VKVKIIRINQETHRISLGMKQLEKNPWDDVQDKYVEGSKVSGVVTNLTDYGVFVELQSGIEGLAHISQISWTKKNIHPSK 326 (576)
Q Consensus 247 v~~~Vl~~d~~~~~i~lslK~l~~dp~~~~~~~~~~G~~v~g~V~~v~~~G~~V~l~~~v~G~i~~sels~~~~~~~~~~ 326 (576)
T Consensus 241 v~vkVl~id~e~~risLslK~l~~dPw~~~~~~~~~G~~v~g~V~~i~~fGafVel~~gveGlvhiSelsw~~~~~~p~~ 320 (556)
T PRK06299 241 VKVKVLKFDKEKKRVSLGLKQLGEDPWEAIEKKYPVGSKVKGKVTNITDYGAFVELEEGIEGLVHVSEMSWTKKNKHPSK 320 (556)
T ss_pred EEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEEEEEECCCEEEEEECCCCEEEEEHHHCCCCCCCCCHHH
T ss_conf 99999988265638999970356785576786478999899999998276079995499589988787167544479789
Q ss_pred EECCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCEEEEEHHHHHCCC
Q ss_conf 00378457999998621550478752034543210000012222213699999850169997068841354005530012
Q gi|254780456|r 327 ILSVGQQVEVVILEVNPARKRISLGLKQALINPWEEFSKSHPPGTEVEGEVKNKTDFGLFIGLDEHLDGMIHLSDLDWNR 406 (576)
Q Consensus 327 ~~~~G~~v~~~Vl~id~~~~~i~lS~k~~~~~p~~~~~~~~~~G~~v~g~V~~v~~~g~~V~l~~~i~g~i~~~dls~~~ 406 (576)
T Consensus 321 ~~~~G~~V~~kIl~id~~~~risLS~K~~~~nPw~~~~~~~~vG~~v~g~V~~i~~fG~fv~l~~gv~GlvH~sdlSW~~ 400 (556)
T PRK06299 321 VVSVGQEVEVMVLEIDEEKRRISLGLKQCKENPWEEFAEKYPVGDVVEGKIKNITDFGAFVGLEGGIDGLVHLSDISWDK 400 (556)
T ss_pred HCCCCCEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEEEECCEEEEEECCCCCEEEEHHHCCCCC
T ss_conf 54479779999999724436888863236679789998635556479999999664369998527732377853545555
Q ss_pred CCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCHHHHCCCCCCCEEEEEEEEEECCEEEEEECCCCCEEE
Q ss_conf 20012342111234226885215654553201132210111000011004789879999999708908999617798499
Q gi|254780456|r 407 PGEKVIAEYAKGDIVKAVVLDIDVGKERISLGVKQLSGSAPDVVDSVSSLRKNDVVSCEVISVSEGGIEVSLIDHKGINS 486 (576)
Q Consensus 407 ~~~~~~~~~k~G~~i~~~Vl~id~~~~~i~LS~K~l~~~~~~~~~~~~~~~~G~iv~g~V~~v~~~G~~V~l~~~~gv~G 486 (576)
T Consensus 401 ~~~~~~~~~k~Gd~v~vkVL~iD~e~~rIsLgiKql~~dPw~~~~--~~~k~G~iv~g~V~~i~~~G~fV~l~--~gieg 476 (556)
T PRK06299 401 KGEEAVELYKKGDEVEAVVLKVDVEKERISLGIKQLEEDPFEEFA--KKHKKGSIVTGTVTEVKDKGAFVELA--DGVEG 476 (556)
T ss_pred CCCCHHHHCCCCCEEEEEEEEECCCCCEEEEEEHHCCCCCHHHHH--HHCCCCCEEEEEEEEEECCCEEEEEC--CCEEE
T ss_conf 641056642689669999999816676798870431278168787--63899899999999997895699938--99099
Q ss_pred EEEHHHCCHHHHCCCHHHCCCCCEEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHCCCC--CCCHHHHHHHHHHHH
Q ss_conf 999747182121042011068987999999970576869987036557777999998403445--777999999999874
Q gi|254780456|r 487 FIRRSDLSRDRVDQDPGRFSKGQIVDACVVNVSKKDGKVSLSIKALEIAEEKGAVAQFGSSDS--GASLGDILGMALKNR 564 (576)
Q Consensus 487 ~i~~s~is~~~~~~~~~~~~vG~~v~~~Vi~id~~~~ri~LS~k~~~~~~~~~~~~~~~~~~~--~~tlg~~~~~~lk~~ 564 (576)
T Consensus 477 lI~~sels~~~~~~~~~~~~~Gd~v~~~Ii~id~e~rkI~LSiK~le~~~eke~~~~y~~~~~~~~~tLgdiLk~~l~~k 556 (556)
T PRK06299 477 FIRASELSRDRVEDATEVLKVGDEVEAKVINIDRKNRRISLSIKALDEAEEKEAIAEYGNSDSDATTTLGDLLKAALKGK 556 (556)
T ss_pred EEEHHHCCCHHHHCCCCCCCCCCEEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 99979968002336211168999899999998277799998715955556799999855667777778899998987479