HHsearch alignment for GI: 254780456 and conserved domain: PRK12329

>PRK12329 nusA transcription elongation factor NusA; Provisional.
Probab=98.03  E-value=8.5e-05  Score=46.35  Aligned_cols=64  Identities=17%  Similarity=0.265  Sum_probs=36.8

Q ss_pred             CCCCEEEEEEEEECCCEEEEEECCC-----CEEEEECCCCCCCCCCCCCCCEECCCCEEEEEEEEEEC-CC--CEEEEE
Q ss_conf             4896658999981596699985142-----00000011110111355742100378457999998621-55--047875
Q gi|254780456|r  281 VEGSKVSGVVTNLTDYGVFVELQSG-----IEGLAHISQISWTKKNIHPSKILSVGQQVEVVILEVNP-AR--KRISLG  351 (576)
Q Consensus       281 ~~G~~v~g~V~~v~~~G~~V~l~~~-----v~G~i~~sels~~~~~~~~~~~~~~G~~v~~~Vl~id~-~~--~~i~lS  351 (576)
T Consensus       152 k~GeIVtG~V~Rve~~~viv~l~~~lG~~~~EAiLP~~Eq-------IP~E~yr~Gdrira~i~~V~~~~~kGpqIiLS  223 (457)
T PRK12329        152 LEDPVLTARVLRFERQSVIMAVSSGFGRPEVEAELPKREQ-------LPNDNYRANATFKVFLKEVSEGPRRGPQLFVS  223 (457)
T ss_pred             HCCCEEEEEEEEEECCCEEEEECCCCCCCCEEEEECHHHC-------CCCCCCCCCCEEEEEEEEEECCCCCCCEEEEE
T ss_conf             5596799999998169779996477776423697278886-------99987899998999999976467888569995