RPSBLAST alignment for GI: 254780456 and conserved domain: TIGR02063

>gnl|CDD|162678 TIGR02063, RNase_R, ribonuclease R. This family consists of an exoribonuclease, ribonuclease R, also called VacB. It is one of the eight exoribonucleases reported in E. coli and is broadly distributed throughout the bacteria. In E. coli, double mutants of this protein and polynucleotide phosphorylase are not viable. Scoring between trusted and noise cutoffs to the model are shorter, divergent forms from the Chlamydiae, and divergent forms from the Campylobacterales (including Helicobacter pylori) and Leptospira interrogans. Length = 709
 Score = 46.1 bits (110), Expect = 2e-05
 Identities = 19/77 (24%), Positives = 43/77 (55%), Gaps = 13/77 (16%)

Query: 198 GQVIEGTVKNITDYGVFVDL--SGVDGLLHVTDI---------AWHRILHPS--KVLSIG 244
           G+  EG +  +T +G+FV+L  + ++GL+H++ +             ++     KV  +G
Sbjct: 628 GEEFEGVISGVTSFGLFVELENNTIEGLVHISTLKDDYYVFDEKGLALVGERTGKVFRLG 687

Query: 245 QQVKVKIIRINQETHRI 261
            +VKV++++ + +T +I
Sbjct: 688 DRVKVRVVKADLDTGKI 704