RPSBLAST alignment for GI: 254780456 and conserved domain: PRK13806
>gnl|CDD|172339 PRK13806, rpsA, 30S ribosomal protein S1; Provisional. Length = 491
Score = 310 bits (797), Expect = 5e-85
Identities = 160/454 (35%), Positives = 248/454 (54%), Gaps = 11/454 (2%)
Query: 5 NPSREDFATLLE--ESFTKKDLAENCVTKGIVVGLEKDTVVVDVGLKFEGRIPRREFMGK 62
E FA LLE E K +L G V+ + +D+V VD G K +G + R E +
Sbjct: 11 LDESESFAELLEAYEGERKTELRVGDKITGTVIAITEDSVFVDTGSKVDGVVDRAELLDA 70
Query: 63 GQYTPIKVGDEVEVYVERTENSFGEAVFSRDKALREGVWEKIEAKFRAGERIEGVIFNQV 122
+ VGDEVE+YV E S+ + + G +E + G +EG +
Sbjct: 71 DGELTVAVGDEVELYVVSVNG--QEIRLSKALSGQGGA-AMLEEAYENGVPVEGKVTGTC 127
Query: 123 KGGMTVDLNGEVAFLPRSQIDIRPVRDVTPLMHEPQLFEILKMDKRRGNIVVSRRAVLEE 182
KGG V++ G AF P SQID+R V D + + F I ++++ NIVVSRRA+LE
Sbjct: 128 KGGFNVEVLGRRAFCPVSQIDLRYVEDPESYVGQTFQFLITRVEENGRNIVVSRRALLER 187
Query: 183 SRAEQRSEIVQKLEEGQVIEGTVKNITDYGVFVDLS-GVDGLLHVTDIAWHRILHPSKVL 241
+ E ++ ++EG V+EGTV + +G FV+L+ GV+G++H+++++W R+ + +
Sbjct: 188 EQKEALEAFMETVKEGDVVEGTVTRLAPFGAFVELAPGVEGMVHISELSWSRVQKADEAV 247
Query: 242 SIGQQVKVKIIRINQETH----RISLGMKQLEKNPWDDVQDKYVEGSKVSGVVTNLTDYG 297
S+G V+VK++ I + RISL +KQ +PWD V D+ G KV+G V L +G
Sbjct: 248 SVGDTVRVKVLGIERAKKGKGLRISLSIKQAGGDPWDTVGDRLKAGDKVTGKVVRLAPFG 307
Query: 298 VFVELQSGIEGLAHISQISWTKKNIHPSKILSVGQQVEVVILEVNPARKRISLGLKQALI 357
FVE+ GIEGL H+S++SWT++ P +++ G V V I +++PA++RISL L+ A
Sbjct: 308 AFVEILPGIEGLVHVSEMSWTRRVNKPEDVVAPGDAVAVKIKDIDPAKRRISLSLRDAEG 367
Query: 358 NPWEEFSKSHPPGTEVEGEVKNKTDFGLFIGLDEHLDGMIHLSDLDWNRPGEKVIAEYAK 417
+PW + ++ PGT V G V+ + FGLF+ L + G++ S + +
Sbjct: 368 DPWADVAERFAPGTTVTGTVEKRAQFGLFVNLAPGVTGLLPASVIS-RAGKPATYEKLKP 426
Query: 418 GDIVKAVVLDIDVGKERISLGVKQLSGSAPDVVD 451
GD V VV +ID K +ISL +GS D D
Sbjct: 427 GDSVTLVVEEIDTAKRKISLAPAGAAGSGADDDD 460