RPSBLAST alignment for GI: 254780456 and conserved domain: COG0557

>gnl|CDD|30903 COG0557, VacB, Exoribonuclease R [Transcription]. Length = 706

 Score = 40.4 bits (94), Expect = 0.001
 Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 18/111 (16%)

Query: 253 RINQETHRISLGMKQLEKNPWDDVQDKYVEGSKVSGVVTNLTDYGVFVEL-QSGIEGLAH 311
           R  QE  R  + + + E         K   G +  GVVT +T +G FVEL + G+EGL H
Sbjct: 600 RRAQEAERDVIDLLKAEY-------MKKRVGEEFDGVVTGVTSFGFFVELPELGLEGLVH 652

Query: 312 ISQISWTKKNIHP----------SKILSVGQQVEVVILEVNPARKRISLGL 352
           IS +     +              K+  +G +V+V +  V+   ++I   L
Sbjct: 653 ISSLPDDYYHFDERGQALVGEKSGKVYRLGDEVKVKVTSVDLDERKIDFEL 703