RPSBLAST alignment for GI: 254780456 and conserved domain: cd00164
>gnl|CDD|88416 cd00164, S1_like, S1_like: Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated proteins. Originally identified in S1 ribosomal protein. This superfamily also contains the Cold Shock Domain (CSD), which is a homolog of the S1 domain. Both domains are members of the Oligonucleotide/oligosaccharide Binding (OB) fold.. Length = 65
Score = 62.4 bits (151), Expect = 3e-10
Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 286 VSGVVTNLTDYGVFVELQSGIEGLAHISQISWTKKNIHPSKILSVGQQVEVVILEVNPAR 345
V+G V ++T +GVFVEL+ G+EGL HIS++S PS++ VG +VEV +LEV+P +
Sbjct: 1 VTGKVVSITKFGVFVELEDGVEGLVHISELSDKFVK-DPSEVFKVGDEVEVKVLEVDPEK 59
Query: 346 KRISLG 351
RISL
Sbjct: 60 GRISLS 65