RPSBLAST alignment for GI: 254780456 and conserved domain: cd00164
>gnl|CDD|88416 cd00164, S1_like, S1_like: Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated proteins. Originally identified in S1 ribosomal protein. This superfamily also contains the Cold Shock Domain (CSD), which is a homolog of the S1 domain. Both domains are members of the Oligonucleotide/oligosaccharide Binding (OB) fold.. Length = 65
Score = 49.3 bits (117), Expect = 3e-06
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 373 VEGEVKNKTDFGLFIGLDEHLDGMIHLSDLDWNRPGEKVIAEYAKGDIVKAVVLDIDVGK 432
V G+V + T FG+F+ L++ ++G++H+S+L + + GD V+ VL++D K
Sbjct: 1 VTGKVVSITKFGVFVELEDGVEGLVHISELSDKFV-KDPSEVFKVGDEVEVKVLEVDPEK 59
Query: 433 ERISLG 438
RISL
Sbjct: 60 GRISLS 65