HHsearch alignment for GI: 254780457 and conserved domain: COG0283
>COG0283 Cmk Cytidylate kinase [Nucleotide transport and metabolism].
Probab=100.00 E-value=0 Score=496.52 Aligned_cols=209 Identities=42% Similarity=0.732 Sum_probs=194.3
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH----------CCCCCCC
Q ss_conf 881898666877896789999999817835620289999985232101110146553333210----------1112444
Q gi|254780457|r 7 QSIIIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLIYRAVAKNILDAGISLDDEKMAIKIAQN----------IVLSNLD 76 (217)
Q Consensus 7 k~~iIaIDGpagsGKsT~ak~lA~~l~~~~ldtG~~YR~~a~~~~~~~~~~~~~~~~~~~~~~----------i~~~~~~ 76 (217)
T Consensus 3 ~~~~IAIDGPagsGKsTvak~lA~~Lg~~yldTGamYRa~a~~~l~~~~~~~d~~~~~~l~~~~~i~f~~~~~v~l~ged 82 (222)
T COG0283 3 AAIIIAIDGPAGSGKSTVAKILAEKLGFHYLDTGAMYRAVALAALKHGVDLDDEDALVALAKELDISFVNDDRVFLNGED 82 (222)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEECCCCEEEECCCC
T ss_conf 76499976887568478999999980986664549999999999980899755999999998588110467158877820
Q ss_pred C-CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 4-443201210011112205789999887888876303884620641255663038868998448888999986677652
Q gi|254780457|r 77 K-AQLSSNAIANVASQVASIDSVRDALIDIQRSFAQNKLGVILDGRDIGTIIFPDARIKFYVTASLDIRARRRYNEMVSR 155 (217)
Q Consensus 77 ~-~~lr~~~I~~~~S~iA~~p~VR~~l~~~Qr~~~~~~~g~V~EGRDigTvVfPdA~~KifL~As~e~RA~RR~~el~~~ 155 (217)
T Consensus 83 vs~~ir~~~V~~~aS~vA~~p~VR~~l~~~Qr~~a~~~~~~V~dGRDiGTvV~PdA~lKiFLtAS~e~RA~RR~~q~~~~ 162 (222)
T COG0283 83 VSEEIRTEEVGNAASKVAAIPEVREALVKLQRAFAKNGPGIVADGRDIGTVVFPDAELKIFLTASPEERAERRYKQLQAK 162 (222)
T ss_pred CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEECCCCCEEEEEECCHHHHHHHHHHHHHHC
T ss_conf 03665168999999999725999999999999998438988986687665677898757898688899999999987744
Q ss_pred HCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 111356999999999856102367578537997399977898989999999999998740
Q gi|254780457|r 156 GEKVDYVKILEDLRNRDNQDRNRSYCPLVRDKDAYFFDTSEMDIGTMCKVAKGLIDTKLD 215 (217)
Q Consensus 156 g~~~~~~ev~~~i~~RD~~D~~R~~sPL~~a~DAi~IDTs~lsi~ev~~~i~~~I~~kl~ 215 (217)
T Consensus 163 g~~~~~e~ll~eI~~RD~~D~~R~~~PLk~A~DA~~iDTs~msieeVv~~il~~~~~~~~ 222 (222)
T COG0283 163 GFSEVFEELLAEIKERDERDSNRAVAPLKPAEDALLLDTSSLSIEEVVEKILELIRQKLA 222 (222)
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHC
T ss_conf 672039999999998623011376788867897489978988299999999999998509