HHsearch alignment for GI: 254780457 and conserved domain: COG0645

Probab=96.58  E-value=0.068  Score=32.21  Aligned_cols=108  Identities=21%  Similarity=0.275  Sum_probs=67.4

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCC
Q ss_conf             89866687789678999999981783562028999998523210111014655333321011124444443201210011
Q gi|254780457|r   10 IIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLIYRAVAKNILDAGISLDDEKMAIKIAQNIVLSNLDKAQLSSNAIANVA   89 (217)
Q Consensus        10 iIaIDGpagsGKsT~ak~lA~~l~~~~ldtG~~YR~~a~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lr~~~I~~~~   89 (217)
T Consensus         3 l~l~~Gl~GsGKstlA~~l~~~lgA~~lrsD~irk~L~---------------------g~p~~~r~~~g~ys~~~~~~-   60 (170)
T COG0645           3 LVLVGGLPGSGKSTLARGLAELLGAIRLRSDVIRKRLF---------------------GVPEETRGPAGLYSPAATAA-   60 (170)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHC---------------------CCCCCCCCCCCCCCHHHHHH-
T ss_conf             79972588865868878988534866874178998723---------------------88610148878876788999-


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEC-------CCHHHHHHCCCCEE---EEEECCHHHHHHH
Q ss_conf             1122057899998878888763038846206-------41255663038868---9984488889999
Q gi|254780457|r   90 SQVASIDSVRDALIDIQRSFAQNKLGVILDG-------RDIGTIIFPDARIK---FYVTASLDIRARR  147 (217)
Q Consensus        90 S~iA~~p~VR~~l~~~Qr~~~~~~~g~V~EG-------RDigTvVfPdA~~K---ifL~As~e~RA~R  147 (217)
T Consensus        61 --------vy~~l~~~A~l~l~~G~~VVlDa~~~r~~~R~~~~~~A~~~gv~~~li~~~ap~~v~~~r  120 (170)
T COG0645          61 --------VYDELLGRAELLLSSGHSVVLDATFDRPQERALARALARDVGVAFVLIRLEAPEEVLRGR  120 (170)
T ss_pred             --------HHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHH
T ss_conf             --------999999889999967991898443378888999999875038854888758829999989