HHsearch alignment for GI: 254780457 and conserved domain: COG0703
>COG0703 AroK Shikimate kinase [Amino acid transport and metabolism].
Probab=98.74 E-value=4.7e-07 Score=63.05 Aligned_cols=157 Identities=20% Similarity=0.310 Sum_probs=84.5
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCC
Q ss_conf 18986668778967899999998178356202899999852321011101465533332101112444444320121001
Q gi|254780457|r 9 IIIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLIYRAVAKNILDAGISLDDEKMAIKIAQNIVLSNLDKAQLSSNAIANV 88 (217)
Q Consensus 9 ~iIaIDGpagsGKsT~ak~lA~~l~~~~ldtG~~YR~~a~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lr~~~I~~~ 88 (217)
T Consensus 3 ~~IvLiG~mGaGKSTIGr~LAk~L~~~F~D~D~~Ie~~------~g~sI~eIF~---~~G-------------------- 53 (172)
T COG0703 3 MNIVLIGFMGAGKSTIGRALAKALNLPFIDTDQEIEKR------TGMSIAEIFE---EEG-------------------- 53 (172)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH------HCCCHHHHHH---HHH--------------------
T ss_conf 61899717999776899999998199802246999999------7969999999---982--------------------
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHH-------HCCCCEEEEEECCHHHHHHHHHHHHHHHH--CCC
Q ss_conf 111220578999988788887630388462064125566-------30388689984488889999866776521--113
Q gi|254780457|r 89 ASQVASIDSVRDALIDIQRSFAQNKLGVILDGRDIGTII-------FPDARIKFYVTASLDIRARRRYNEMVSRG--EKV 159 (217)
Q Consensus 89 ~S~iA~~p~VR~~l~~~Qr~~~~~~~g~V~EGRDigTvV-------fPdA~~KifL~As~e~RA~RR~~el~~~g--~~~ 159 (217)
T Consensus 54 ------E~~FR~~E~~vl~~l~~~~~~ViaTGG--G~v~~~enr~~l~~~g~vv~L~~~~e~l~~Rl~~~-~~RPll~~~ 124 (172)
T COG0703 54 ------EEGFRRLETEVLKELLEEDNAVIATGG--GAVLSEENRNLLKKRGIVVYLDAPFETLYERLQRD-RKRPLLQTE 124 (172)
T ss_pred ------HHHHHHHHHHHHHHHHHCCCEEEECCC--CCCCCHHHHHHHHHCCEEEEEECCHHHHHHHHCCC-CCCCCCCCC
T ss_conf ------899999999999998626995997798--61168999999984885899969999999982346-679865677
Q ss_pred CHHHHHHHHH-HHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 5699999999-98561023675785379973999778989899999999999987
Q gi|254780457|r 160 DYVKILEDLR-NRDNQDRNRSYCPLVRDKDAYFFDTSEMDIGTMCKVAKGLIDTK 213 (217)
Q Consensus 160 ~~~ev~~~i~-~RD~~D~~R~~sPL~~a~DAi~IDTs~lsi~ev~~~i~~~I~~k 213 (217)
T Consensus 125 ~~~~~l~~L~~~R~---------~~Y~e~a~~~~~~~~~~-~~v~~~i~~~l~~~ 169 (172)
T COG0703 125 DPREELEELLEERQ---------PLYREVADFIIDTDDRS-EEVVEEILEALEGS 169 (172)
T ss_pred CHHHHHHHHHHHHH---------HHHHHHCCEEECCCCCC-HHHHHHHHHHHHHH
T ss_conf 76899999999989---------99997274884489984-89999999999873