HHsearch alignment for GI: 254780457 and conserved domain: COG1660
>COG1660 Predicted P-loop-containing kinase [General function prediction only].
Probab=98.18 E-value=2.8e-05 Score=52.44 Aligned_cols=148 Identities=19% Similarity=0.281 Sum_probs=79.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC----CCCCCCHHH
Q ss_conf 8986668778967899999998178356202899999852321011101465533332101112444----444320121
Q gi|254780457|r 10 IIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLIYRAVAKNILDAGISLDDEKMAIKIAQNIVLSNLD----KAQLSSNAI 85 (217)
Q Consensus 10 iIaIDGpagsGKsT~ak~lA~~l~~~~ldtG~~YR~~a~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~lr~~~I 85 (217)
T Consensus 3 lvIVTGlSGAGKsvAl~~l-EDlGyycvD---------------NLPp~Llp~~~~~~~-~~~~~~~kvAv~iDiRs~-- 63 (286)
T COG1660 3 LVIVTGLSGAGKSVALRVL-EDLGYYCVD---------------NLPPQLLPKLADLML-TLESRITKVAVVIDVRSR-- 63 (286)
T ss_pred EEEEECCCCCCHHHHHHHH-HHCCEEEEC---------------CCCHHHHHHHHHHHH-HCCCCCCEEEEEEECCCC--
T ss_conf 6999568887688999999-745804535---------------899889999999976-305677527999961450--
Q ss_pred HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCCCEE-EEEECCHHHHHHHHHHHHHHHHCCCCHHH-
Q ss_conf 0011112205789999887888876303884620641255663038868-99844888899998667765211135699-
Q gi|254780457|r 86 ANVASQVASIDSVRDALIDIQRSFAQNKLGVILDGRDIGTIIFPDARIK-FYVTASLDIRARRRYNEMVSRGEKVDYVK- 163 (217)
Q Consensus 86 ~~~~S~iA~~p~VR~~l~~~Qr~~~~~~~g~V~EGRDigTvVfPdA~~K-ifL~As~e~RA~RR~~el~~~g~~~~~~e- 163 (217)
T Consensus 64 ----~~~~~l~~~l~~l-------~~~~-~---------------~~~~iLFLeA~~~~-Lv~RY~etRR~-HPL~~~~~ 114 (286)
T COG1660 64 ----EFFGDLEEVLDEL-------KDNG-D---------------IDPRVLFLEADDET-LVRRYSETRRS-HPLSEDGL 114 (286)
T ss_pred ----HHHHHHHHHHHHH-------HHCC-C---------------CCCEEEEEECCHHH-HHHHHHHHHHC-CCCCCCCC
T ss_conf ----3178899999999-------8557-9---------------87249999786457-99887552002-88876672
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999999985610236757853799739997789898999999999999
Q gi|254780457|r 164 ILEDLRNRDNQDRNRSYCPLVRDKDAYFFDTSEMDIGTMCKVAKGLID 211 (217)
Q Consensus 164 v~~~i~~RD~~D~~R~~sPL~~a~DAi~IDTs~lsi~ev~~~i~~~I~ 211 (217)
T Consensus 115 l~~~I~~-----ERelL~pLk~~A~-~vIDTs~ls~~~Lr~~i~~~f~ 156 (286)
T COG1660 115 LLEAIAK-----ERELLAPLREIAD-LVIDTSELSVHELRERIRTRFL 156 (286)
T ss_pred HHHHHHH-----HHHHHHHHHHHHH-HEEECCCCCHHHHHHHHHHHHH
T ss_conf 7899999-----9998887887766-2765566889999999999970