HHsearch alignment for GI: 254780457 and conserved domain: COG1936
>COG1936 Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism].
Probab=99.36 E-value=8.1e-11 Score=85.54 Aligned_cols=149 Identities=21% Similarity=0.320 Sum_probs=97.3
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCC
Q ss_conf 18986668778967899999998178356202899999852321011101465533332101112444444320121001
Q gi|254780457|r 9 IIIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLIYRAVAKNILDAGISLDDEKMAIKIAQNIVLSNLDKAQLSSNAIANV 88 (217)
Q Consensus 9 ~iIaIDGpagsGKsT~ak~lA~~l~~~~ldtG~~YR~~a~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lr~~~I~~~ 88 (217)
T Consensus 1 m~I~ITGTPGvGKTT~~~~L~-~lg~~~i~l~e-------l~~e~~~~~~~------------------de~-------r 47 (180)
T COG1936 1 MLIAITGTPGVGKTTVCKLLR-ELGYKVIELNE-------LAKENGLYTEY------------------DEL-------R 47 (180)
T ss_pred CEEEEECCCCCCHHHHHHHHH-HHCCCEEEHHH-------HHHHCCCEECC------------------CCC-------C
T ss_conf 937993799986687999999-82984661999-------99866971143------------------776-------6
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 11122057899998878888763038846206412556630388689984488889999866776521113569999999
Q gi|254780457|r 89 ASQVASIDSVRDALIDIQRSFAQNKLGVILDGRDIGTIIFPDARIKFYVTASLDIRARRRYNEMVSRGEKVDYVKILEDL 168 (217)
Q Consensus 89 ~S~iA~~p~VR~~l~~~Qr~~~~~~~g~V~EGRDigTvVfPdA~~KifL~As~e~RA~RR~~el~~~g~~~~~~ev~~~i 168 (217)
T Consensus 48 ~s~~vD~d~~~~~le~~~-----~~~~~Ivd~H--~~hl~~~~dlVvVLR~~p~~L~~R----Lk~RGy~--~eKI~ENv 114 (180)
T COG1936 48 KSVIVDVDKLRKRLEELL-----REGSGIVDSH--LSHLLPDCDLVVVLRADPEVLYER----LKGRGYS--EEKILENV 114 (180)
T ss_pred CEEEEEHHHHHHHHHHHH-----CCCCEEEECH--HHHCCCCCCEEEEECCCHHHHHHH----HHHCCCC--HHHHHHHH
T ss_conf 158866799998888875-----0588476126--662178788899971898999999----9876998--78988779
Q ss_pred -------HHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf -------99856102367578537997399977898989999999999998
Q gi|254780457|r 169 -------RNRDNQDRNRSYCPLVRDKDAYFFDTSEMDIGTMCKVAKGLIDT 212 (217)
Q Consensus 169 -------~~RD~~D~~R~~sPL~~a~DAi~IDTs~lsi~ev~~~i~~~I~~ 212 (217)
T Consensus 115 eAEi~~vi~~EA~E~---------~~~v~evdtt~~s~ee~~~~i~~ii~~ 156 (180)
T COG1936 115 EAEILDVILIEAVER---------FEAVIEVDTTNRSPEEVAEEIIDIIGG 156 (180)
T ss_pred HHHHHHHHHHHHHHH---------CCCEEEEECCCCCHHHHHHHHHHHHCC
T ss_conf 999999999999973---------476499978999999999999999703