HHsearch alignment for GI: 254780457 and conserved domain: COG4088
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism].
Probab=97.72 E-value=0.00055 Score=44.71 Aligned_cols=149 Identities=21% Similarity=0.237 Sum_probs=72.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH---CCCEEECCHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHCCCCCCCCCCCCCHH
Q ss_conf 89866687789678999999981---783562028999998523210111014--6553333210111244444432012
Q gi|254780457|r 10 IIAIDGTAAAGKGVLSRFIALEY---GFHYLDTGLIYRAVAKNILDAGISLDD--EKMAIKIAQNIVLSNLDKAQLSSNA 84 (217)
Q Consensus 10 iIaIDGpagsGKsT~ak~lA~~l---~~~~ldtG~~YR~~a~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~lr~~~ 84 (217)
T Consensus 3 LiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~kdy~~~i~~DEslpi~ke~yres~~ks~~r-lldSalk-------- 73 (261)
T COG4088 3 LIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEKDYLRGILWDESLPILKEVYRESFLKSVER-LLDSALK-------- 73 (261)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHH-HHHHHHC--------
T ss_conf 6998269998801789999999997200112132014541233132403799999999888999-9999863--------
Q ss_pred HHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 10011112205789999887888876303884620641255663038868998448888999986677652111356999
Q gi|254780457|r 85 IANVASQVASIDSVRDALIDIQRSFAQNKLGVILDGRDIGTIIFPDARIKFYVTASLDIRARRRYNEMVSRGEKVDYVKI 164 (217)
Q Consensus 85 I~~~~S~iA~~p~VR~~l~~~Qr~~~~~~~g~V~EGRDigTvVfPdA~~KifL~As~e~RA~RR~~el~~~g~~~~~~ev 164 (217)
T Consensus 74 -n~~V-IvDd----tNYyksmRrqL~ceak~------------~~tt~ciIyl~~plDtc~rr--N--~ergepip-~Ev 130 (261)
T COG4088 74 -NYLV-IVDD----TNYYKSMRRQLACEAKE------------RKTTWCIIYLRTPLDTCLRR--N--RERGEPIP-EEV 130 (261)
T ss_pred -CEEE-EEEC----CCHHHHHHHHHHHHHHH------------CCCCEEEEEECCCHHHHHHH--H--CCCCCCCC-HHH
T ss_conf -6499-9706----32888999999999986------------37865999972688999886--0--24799998-999
Q ss_pred HHHHHHHHH--HCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 999999856--10236757853799739997789
Q gi|254780457|r 165 LEDLRNRDN--QDRNRSYCPLVRDKDAYFFDTSE 196 (217)
Q Consensus 165 ~~~i~~RD~--~D~~R~~sPL~~a~DAi~IDTs~ 196 (217)
T Consensus 131 l~qly~RfEePn~~~rWDspl------l~id~~d 158 (261)
T COG4088 131 LRQLYDRFEEPNPDRRWDSPL------LVIDDSD 158 (261)
T ss_pred HHHHHHHHCCCCCCCCCCCCE------EEEECCC
T ss_conf 999999614999776556763------7886355