HHsearch alignment for GI: 254780457 and conserved domain: PRK00698
>PRK00698 tmk thymidylate kinase; Validated.
Probab=99.01 E-value=9.4e-08 Score=67.23 Aligned_cols=184 Identities=16% Similarity=0.126 Sum_probs=79.6
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHC---CCEEEC-----CHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHCCCCCC
Q ss_conf 5881898666877896789999999817---835620-----289999985232101--110146553333210111244
Q gi|254780457|r 6 SQSIIIAIDGTAAAGKGVLSRFIALEYG---FHYLDT-----GLIYRAVAKNILDAG--ISLDDEKMAIKIAQNIVLSNL 75 (217)
Q Consensus 6 ~k~~iIaIDGpagsGKsT~ak~lA~~l~---~~~ldt-----G~~YR~~a~~~~~~~--~~~~~~~~~~~~~~~i~~~~~ 75 (217)
T Consensus 1 mkG~fIviEGiDGsGKsTq~~~L~~~L~~~g~~v~~t~eP~~t~~g~~ir~~~~~~~~~~~~~~~~lLf~adR~~~~~~~ 80 (204)
T PRK00698 1 MRGMFITIEGIDGAGKSTQIELLAERLEEQGRDVVFTREPGGTPLGEKLRELLLDPNEPMDDKTELLLFLAARAQHLEEV 80 (204)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 98319999889999899999999999996799789986999980699999998277767998999999999999999999
Q ss_pred CCCCCCCHH--H-HCC-CCCCCH----HHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCCCEEEEEECCHHHHHHH
Q ss_conf 444432012--1-001-111220----57899998878888763038846206412556630388689984488889999
Q gi|254780457|r 76 DKAQLSSNA--I-ANV-ASQVAS----IDSVRDALIDIQRSFAQNKLGVILDGRDIGTIIFPDARIKFYVTASLDIRARR 147 (217)
Q Consensus 76 ~~~~lr~~~--I-~~~-~S~iA~----~p~VR~~l~~~Qr~~~~~~~g~V~EGRDigTvVfPdA~~KifL~As~e~RA~R 147 (217)
T Consensus 81 I~p~L~~g~iVI~DRy~~S~~aYqg~~~~~~~~~i~~l~~~~~----------------~~~~PDl~i~Ldv~~e~~~~R 144 (204)
T PRK00698 81 IKPALARGKWVISDRFIDSSLAYQGGGRGLDIDLLAALNRFAL----------------GGFRPDLTLYLDVPPEVGLAR 144 (204)
T ss_pred HHHHHHCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHH----------------CCCCCCEEEEEECCHHHHHHH
T ss_conf 9988836998998364050999998607999999999998872----------------799998589981799999999
Q ss_pred HHHHHHHHHCCCCHHH--HHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8667765211135699--999999985610236757853799739997789898999999999999874
Q gi|254780457|r 148 RYNEMVSRGEKVDYVK--ILEDLRNRDNQDRNRSYCPLVRDKDAYFFDTSEMDIGTMCKVAKGLIDTKL 214 (217)
Q Consensus 148 R~~el~~~g~~~~~~e--v~~~i~~RD~~D~~R~~sPL~~a~DAi~IDTs~lsi~ev~~~i~~~I~~kl 214 (217)
T Consensus 145 i~~R----~~~dr~e~~~~~~~~kv~~~Y---~~l~~-~~~~~~~~IDa~-~~~eeV~~~I~~~i~~~l 204 (204)
T PRK00698 145 IAAR----GELDRIEQEGLDFFERVREGY---LELAA-ADPERIVVIDAS-QSLEEVHEDILAVLKAWL 204 (204)
T ss_pred HHHC----CCCCCHHHHHHHHHHHHHHHH---HHHHH-HCCCCEEEEECC-CCHHHHHHHHHHHHHHHC
T ss_conf 9837----986420150099999999999---99998-588968998499-999999999999999649