HHsearch alignment for GI: 254780457 and conserved domain: PRK00889

Probab=99.30  E-value=1.2e-10  Score=84.62  Aligned_cols=165  Identities=15%  Similarity=0.174  Sum_probs=98.5

Q ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHCCC-----EEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             5588189866687789678999999981783-----56202899999852321011101465533332101112444444
Q gi|254780457|r    5 ESQSIIIAIDGTAAAGKGVLSRFIALEYGFH-----YLDTGLIYRAVAKNILDAGISLDDEKMAIKIAQNIVLSNLDKAQ   79 (217)
Q Consensus         5 ~~k~~iIaIDGpagsGKsT~ak~lA~~l~~~-----~ldtG~~YR~~a~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   79 (217)
T Consensus         1 ~~kg~viWltGlsgSGKTTia~~l~~~L~~~~~~~~~LD-GD~lR~~--l~~~lgfs~~dR~~n~~r~~~l------a~~   71 (175)
T PRK00889          1 MQRGVTVWFTGLSGAGKTTISHALAEKLRARGYPVEVLD-GDIVRTN--LSKGLGFSKEDRDTNIRRIGFV------AHL   71 (175)
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEC-CHHHHHH--HCCCCCCCHHHHHHHHHHHHHH------HHH
T ss_conf             998889998898999999999999999998699679977-6888875--3678898989999999999999------999


Q ss_pred             CCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCC
Q ss_conf             32012100111122057899998878888763038846206412556630388689984488889999866776521113
Q gi|254780457|r   80 LSSNAIANVASQVASIDSVRDALIDIQRSFAQNKLGVILDGRDIGTIIFPDARIKFYVTASLDIRARRRYNEMVSRGEKV  159 (217)
Q Consensus        80 lr~~~I~~~~S~iA~~p~VR~~l~~~Qr~~~~~~~g~V~EGRDigTvVfPdA~~KifL~As~e~RA~RR~~el~~~g~~~  159 (217)
T Consensus        72 l~~~g~~vIvs~isp~~~~R~~~r~~----------------------~~~-~~EIyv~~~l~~~~~RD~KgLY~ka~~-  127 (175)
T PRK00889         72 LTRHGVIVLVSAISPYRETREEVRGT----------------------IGN-FVEVFVNAPLEVCEQRDVKGLYAKARA-  127 (175)
T ss_pred             HHHCCCEEEEEECCCCHHHHHHHHHH----------------------CCC-CEEEEECCCHHHHHHCCHHHHHHHHHC-
T ss_conf             98189868885047999999999985----------------------787-669984288899988070547789764-


Q ss_pred             CHHHHHHHHHHHHHHCCCCCCCCCCCCCCE-EEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf             569999999998561023675785379973-999778989899999999999987
Q gi|254780457|r  160 DYVKILEDLRNRDNQDRNRSYCPLVRDKDA-YFFDTSEMDIGTMCKVAKGLIDTK  213 (217)
Q Consensus       160 ~~~ev~~~i~~RD~~D~~R~~sPL~~a~DA-i~IDTs~lsi~ev~~~i~~~I~~k  213 (217)
T Consensus       128 -----------g~i~n~~Gid~~yE~P~~pdl~IdT~~~si~~~~~~Ii~~L~~~  171 (175)
T PRK00889        128 -----------GEIKHFTGIDDPYEPPLNPEVECRTDLESLEESVAKVLQKLEEL  171 (175)
T ss_pred             -----------CCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHC
T ss_conf             -----------87788400568999999980698799999999999999999985