HHsearch alignment for GI: 254780457 and conserved domain: PRK05416
>PRK05416 hypothetical protein; Provisional.
Probab=98.64 E-value=6.9e-07 Score=62.05 Aligned_cols=145 Identities=19% Similarity=0.348 Sum_probs=76.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC-CCCCCC-CCCCCCHHHHC
Q ss_conf 8986668778967899999998178356202899999852321011101465533332101-112444-44432012100
Q gi|254780457|r 10 IIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLIYRAVAKNILDAGISLDDEKMAIKIAQNI-VLSNLD-KAQLSSNAIAN 87 (217)
Q Consensus 10 iIaIDGpagsGKsT~ak~lA~~l~~~~ldtG~~YR~~a~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~-~~~lr~~~I~~ 87 (217)
T Consensus 8 lviVTGlSGAGKStAl~~L-EDlGy~ciD---------------NlP~~Ll~~l~~~~~~~~~~~~lAv~iD~R~~~~-- 69 (292)
T PRK05416 8 LVIVTGLSGAGKSVALRAL-EDLGYYCVD---------------NLPPSLLPKLVELLAQSGGIDKVAVVIDVRSRPF-- 69 (292)
T ss_pred EEEEECCCCCCHHHHHHHH-HHCCCEEEC---------------CCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC--
T ss_conf 9999689978799999999-817944786---------------8888999999999724788770699982466544--
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCCCEE-EEEECCHHHHHHHHHHHHHHHH----CCCCHH
Q ss_conf 11112205789999887888876303884620641255663038868-9984488889999866776521----113569
Q gi|254780457|r 88 VASQVASIDSVRDALIDIQRSFAQNKLGVILDGRDIGTIIFPDARIK-FYVTASLDIRARRRYNEMVSRG----EKVDYV 162 (217)
Q Consensus 88 ~~S~iA~~p~VR~~l~~~Qr~~~~~~~g~V~EGRDigTvVfPdA~~K-ifL~As~e~RA~RR~~el~~~g----~~~~~~ 162 (217)
T Consensus 70 ----~~~-------l~~~~~~l-~~~-~---------------~~~~ilFLdA~~~~-LlrRy~eTRR~HPL~~~~~~L~ 120 (292)
T PRK05416 70 ----FLD-------LPEALDEL-RER-G---------------IDVRVLFLDASDEV-LIRRYSETRRRHPLSGDGGSLL 120 (292)
T ss_pred ----HHH-------HHHHHHHH-HHC-C---------------CCEEEEEEECCHHH-HHHHHHHCCCCCCCCCCCCCHH
T ss_conf ----778-------99999999-857-9---------------95599999788699-9998875068999888999989
Q ss_pred HHHHHHH-HHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 9999999-985610236757853799739997789898999999999999
Q gi|254780457|r 163 KILEDLR-NRDNQDRNRSYCPLVRDKDAYFFDTSEMDIGTMCKVAKGLID 211 (217)
Q Consensus 163 ev~~~i~-~RD~~D~~R~~sPL~~a~DAi~IDTs~lsi~ev~~~i~~~I~ 211 (217)
T Consensus 121 ---eaI~~Er~------~L~~ir~~Ad-~vIDTS~l~~~~Lr~~i~~~~~ 160 (292)
T PRK05416 121 ---EAIELERE------LLAPLRERAD-LVIDTSELSVHQLRERIRERFG 160 (292)
T ss_pred ---HHHHHHHH------HHHHHHHHCC-EEEECCCCCHHHHHHHHHHHHC
T ss_conf ---99999999------9999997402-8974799999999999999865