HHsearch alignment for GI: 254780457 and conserved domain: PRK06731
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated.
Probab=94.53 E-value=0.042 Score=33.50 Aligned_cols=47 Identities=21% Similarity=0.097 Sum_probs=34.7
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCE----EECCHHHHHHHHHHH
Q ss_conf 55881898666877896789999999817835----620289999985232
Q gi|254780457|r 5 ESQSIIIAIDGTAAAGKGVLSRFIALEYGFHY----LDTGLIYRAVAKNIL 51 (217)
Q Consensus 5 ~~k~~iIaIDGpagsGKsT~ak~lA~~l~~~~----ldtG~~YR~~a~~~~ 51 (217)
T Consensus 72 ~~~~~vI~lvG~~G~GKTTT~AKLA~~~~~~~~kV~lia~DtyR~aA~eQL 122 (270)
T PRK06731 72 EKEVQTIALIGPTGVGKTTTLAKMAWQFHGKKKTVGFITTDHSRIGTVQQL 122 (270)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHH
T ss_conf 799818999888989889999999999986799089998388888899999