HHsearch alignment for GI: 254780457 and conserved domain: PRK12723
>PRK12723 flagellar biosynthesis regulator FlhF; Provisional.
Probab=94.16 E-value=0.054 Score=32.84 Aligned_cols=46 Identities=26% Similarity=0.260 Sum_probs=32.6
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHCCCE--------EECCHHHHHHHHHHHH
Q ss_conf 881898666877896789999999817835--------6202899999852321
Q gi|254780457|r 7 QSIIIAIDGTAAAGKGVLSRFIALEYGFHY--------LDTGLIYRAVAKNILD 52 (217)
Q Consensus 7 k~~iIaIDGpagsGKsT~ak~lA~~l~~~~--------ldtG~~YR~~a~~~~~ 52 (217)
T Consensus 173 k~~vi~lVGPTGvGKTTTiAKLAa~~~l~~~~k~~~V~lit~DtyRigAveQLk 226 (388)
T PRK12723 173 KKRIFILVGPTGVGKTTTIAKLAAIYGINSDDKSLNIKIITIDNYRIGAKKQIQ 226 (388)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHH
T ss_conf 762899989988757879999999999862676773799980787588999999