HHsearch alignment for GI: 254780457 and conserved domain: PRK13974
>PRK13974 thymidylate kinase; Provisional.
Probab=98.69 E-value=6.5e-07 Score=62.20 Aligned_cols=77 Identities=16% Similarity=0.267 Sum_probs=46.6
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHH--HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHH
Q ss_conf 0388689984488889999866776521113569--99999999856102367578537997399977898989999999
Q gi|254780457|r 129 PDARIKFYVTASLDIRARRRYNEMVSRGEKVDYV--KILEDLRNRDNQDRNRSYCPLVRDKDAYFFDTSEMDIGTMCKVA 206 (217)
Q Consensus 129 PdA~~KifL~As~e~RA~RR~~el~~~g~~~~~~--ev~~~i~~RD~~D~~R~~sPL~~a~DAi~IDTs~lsi~ev~~~i 206 (217)
T Consensus 133 ~~PDlt~~LDv~~e~a~~R~~~~~~d---r~e~e~~~f~~kV--r~~---y~~la---~~~~~~~IDa~-~~ieeV~~~I 200 (212)
T PRK13974 133 LSPDLTFFLEISVEESIRRRKNRKPD---RIEAEGIEFLERV--AEG---FALIA---EERNWKVISAD-QSIETISNEI 200 (212)
T ss_pred CCCCEEEEECCCHHHHHHHHHCCCCC---CHHCCCHHHHHHH--HHH---HHHHH---CCCCEEEEECC-CCHHHHHHHH
T ss_conf 99998999769758899988477634---3101619999999--999---99984---73987999899-9999999999
Q ss_pred HHHHHHHHHCC
Q ss_conf 99999874069
Q gi|254780457|r 207 KGLIDTKLDNS 217 (217)
Q Consensus 207 ~~~I~~kl~n~ 217 (217)
T Consensus 201 ~~~i~~~~~~~ 211 (212)
T PRK13974 201 KETLLNNFSNK 211 (212)
T ss_pred HHHHHHHHHCC
T ss_conf 99999997347