HHsearch alignment for GI: 254780457 and conserved domain: PRK13974

>PRK13974 thymidylate kinase; Provisional.
Probab=98.69  E-value=6.5e-07  Score=62.20  Aligned_cols=77  Identities=16%  Similarity=0.267  Sum_probs=46.6

Q ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHH--HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHH
Q ss_conf             0388689984488889999866776521113569--99999999856102367578537997399977898989999999
Q gi|254780457|r  129 PDARIKFYVTASLDIRARRRYNEMVSRGEKVDYV--KILEDLRNRDNQDRNRSYCPLVRDKDAYFFDTSEMDIGTMCKVA  206 (217)
Q Consensus       129 PdA~~KifL~As~e~RA~RR~~el~~~g~~~~~~--ev~~~i~~RD~~D~~R~~sPL~~a~DAi~IDTs~lsi~ev~~~i  206 (217)
T Consensus       133 ~~PDlt~~LDv~~e~a~~R~~~~~~d---r~e~e~~~f~~kV--r~~---y~~la---~~~~~~~IDa~-~~ieeV~~~I  200 (212)
T PRK13974        133 LSPDLTFFLEISVEESIRRRKNRKPD---RIEAEGIEFLERV--AEG---FALIA---EERNWKVISAD-QSIETISNEI  200 (212)
T ss_pred             CCCCEEEEECCCHHHHHHHHHCCCCC---CHHCCCHHHHHHH--HHH---HHHHH---CCCCEEEEECC-CCHHHHHHHH
T ss_conf             99998999769758899988477634---3101619999999--999---99984---73987999899-9999999999


Q ss_pred             HHHHHHHHHCC
Q ss_conf             99999874069
Q gi|254780457|r  207 KGLIDTKLDNS  217 (217)
Q Consensus       207 ~~~I~~kl~n~  217 (217)
T Consensus       201 ~~~i~~~~~~~  211 (212)
T PRK13974        201 KETLLNNFSNK  211 (212)
T ss_pred             HHHHHHHHHCC
T ss_conf             99999997347