HHsearch alignment for GI: 254780457 and conserved domain: TIGR01842

>TIGR01842 type_I_sec_PrtD type I secretion system ATPase; InterPro: IPR010128 Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N terminus, but rather carry signals located toward the extreme C terminus to direct type I secretion.; GO: 0005524 ATP binding, 0015031 protein transport, 0016021 integral to membrane.
Probab=97.04  E-value=0.0004  Score=45.58  Aligned_cols=35  Identities=29%  Similarity=0.394  Sum_probs=25.4

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHH----CCCEEECCHHHH
Q ss_conf             89866687789678999999981----783562028999
Q gi|254780457|r   10 IIAIDGTAAAGKGVLSRFIALEY----GFHYLDTGLIYR   44 (217)
Q Consensus        10 iIaIDGpagsGKsT~ak~lA~~l----~~~~ldtG~~YR   44 (217)
T Consensus       358 ~laIIGPSgSGKStLaR~~vG~W~~~~G~VRLDGadl~q  396 (556)
T TIGR01842       358 ALAIIGPSGSGKSTLARILVGIWPPASGSVRLDGADLKQ  396 (556)
T ss_pred             EEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEHHHHHC
T ss_conf             588874786525889878872101356533640334402