HHsearch alignment for GI: 254780457 and conserved domain: TIGR01846
>TIGR01846 type_I_sec_HlyB type I secretion system ATPase; InterPro: IPR010132 Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This entry contains one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N terminus, but rather carry signals located toward the extreme C terminus to direct type I secretion.; GO: 0005524 ATP binding, 0008565 protein transporter activity, 0015031 protein transport, 0016021 integral to membrane.
Probab=97.46 E-value=8.3e-05 Score=49.64 Aligned_cols=26 Identities=23% Similarity=0.387 Sum_probs=21.5
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCC
Q ss_conf 189866687789678999999981783
Q gi|254780457|r 9 IIIAIDGTAAAGKGVLSRFIALEYGFH 35 (217)
Q Consensus 9 ~iIaIDGpagsGKsT~ak~lA~~l~~~ 35 (217)
T Consensus 492 e~IGIvGpSGSGKSTLTKL~-QRLYtP 517 (703)
T TIGR01846 492 EVIGIVGPSGSGKSTLTKLL-QRLYTP 517 (703)
T ss_pred EEEEEECCCCCCHHHHHHHH-HHHCCC
T ss_conf 57998727898678999998-861488