HHsearch alignment for GI: 254780457 and conserved domain: TIGR02397

>TIGR02397 dnaX_nterm DNA polymerase III, subunits gamma and tau; InterPro: IPR012763 This entry represents the well-conserved first N-terminal domain of DnaX, approx. 365 aa. The full-length product of the dnaX gene in Escherichia coli encodes the DNA polymerase III tau subunit. A translational frameshift leads to early termination and a truncated protein subunit gamma, about 1/3 shorter than tau and present in roughly equal amounts. This frameshift mechanism is not necessarily universal for species with DNA polymerase III but appears conserved in the extreme thermophile Thermus thermophilis.; GO: 0003887 DNA-directed DNA polymerase activity, 0005524 ATP binding, 0006260 DNA replication, 0009360 DNA polymerase III complex.
Probab=96.80  E-value=0.00076  Score=43.89  Aligned_cols=27  Identities=22%  Similarity=0.367  Sum_probs=25.1

Q ss_pred             EECCCCCCHHHHHHHHHHHHCCCEEECC
Q ss_conf             6668778967899999998178356202
Q gi|254780457|r   13 IDGTAAAGKGVLSRFIALEYGFHYLDTG   40 (217)
Q Consensus        13 IDGpagsGKsT~ak~lA~~l~~~~ldtG   40 (217)
T Consensus        41 F~GpRGtGKTS~ARIfAKaLNC~-~~~~   67 (363)
T TIGR02397        41 FSGPRGTGKTSIARIFAKALNCQ-GPDG   67 (363)
T ss_pred             ECCCCCCCHHHHHHHHHHHHCCC-CCCC
T ss_conf             02859976355899999986588-7877