HHsearch alignment for GI: 254780457 and conserved domain: TIGR03269

>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.

Probab=95.31  E-value=0.015  Score=36.11  Aligned_cols=31  Identities=39%  Similarity=0.423  Sum_probs=23.8

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHCCCEEECCHH
Q ss_conf             1898666877896789999999817835620289
Q gi|254780457|r    9 IIIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLI   42 (217)
Q Consensus         9 ~iIaIDGpagsGKsT~ak~lA~~l~~~~ldtG~~   42 (217)
T Consensus       311 Ei~gi~G~nGsGKsTL~k~l~G---l~~p~~G~V  341 (520)
T TIGR03269       311 EIFGIVGTSGAGKTTLSKIIAG---VLEPTSGEV  341 (520)
T ss_pred             CEEEEECCCCCCHHHHHHHHHC---CCCCCCCEE
T ss_conf             6899987888878999999948---878987479