HHsearch alignment for GI: 254780457 and conserved domain: TIGR03574

>TIGR03574 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Members of this protein are L-seryl-tRNA(Sec) kinase. This enzyme is part of a two-step pathway in Eukaryota and Archaea for performing selenocysteine biosynthesis by changing serine misacylated on selenocysteine-tRNA to selenocysteine. This enzyme performs the first step, phosphorylation of the OH group of the serine side chain. This family represents archaeal proteins with this activity.
Probab=98.08  E-value=0.00019  Score=47.45  Aligned_cols=147  Identities=23%  Similarity=0.359  Sum_probs=83.1

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHCCC-----EEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
Q ss_conf             9866687789678999999981783-----56202899999852321011101465533332101112444444320121
Q gi|254780457|r   11 IAIDGTAAAGKGVLSRFIALEYGFH-----YLDTGLIYRAVAKNILDAGISLDDEKMAIKIAQNIVLSNLDKAQLSSNAI   85 (217)
Q Consensus        11 IaIDGpagsGKsT~ak~lA~~l~~~-----~ldtG~~YR~~a~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lr~~~I   85 (217)
T Consensus         2 ivl~GlP~SGKSt~a~~L~~~l~~~~~~~i~~~~d~~~~~~~---------~~~--------------------------   46 (249)
T TIGR03574         2 IILTGLPGVGKSTFSKELSKKLSEKNIDNIILGTDLIRESFP---------VWK--------------------------   46 (249)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHH---------HCC--------------------------
T ss_conf             789678999899999999999998299659965520021200---------033--------------------------


Q ss_pred             HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEC---------------CCHHHHHHCCCCEEEEEECCHHHHHHHHHH
Q ss_conf             00111122057899998878888763038846206---------------412556630388689984488889999866
Q gi|254780457|r   86 ANVASQVASIDSVRDALIDIQRSFAQNKLGVILDG---------------RDIGTIIFPDARIKFYVTASLDIRARRRYN  150 (217)
Q Consensus        86 ~~~~S~iA~~p~VR~~l~~~Qr~~~~~~~g~V~EG---------------RDigTvVfPdA~~KifL~As~e~RA~RR~~  150 (217)
T Consensus        47 ------~~~Ek~~r~~~~~~v~~~l~~~~~vI~D~~nYiKg~RYEL~clAk~~~t-----~~c~I~~~~p~e~c~~~N--  113 (249)
T TIGR03574        47 ------EKYEEFIRDSTLYLIKTALKNKYSVIVDDTNYYNSKRRDLINIAKEYNK-----NYIIIYLKAPLDTLLRRN--  113 (249)
T ss_pred             ------HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCC-----CEEEEEECCCHHHHHHHH--
T ss_conf             ------6779998999999999984337669972732788999999999998499-----869999739999999987--


Q ss_pred             HHHHHHCCCCHHHHHHHHHHHHHH--CCCCCCCCCCCCCCEEEEECC-CCCHHHHHHHHHHHHHHHH
Q ss_conf             776521113569999999998561--023675785379973999778-9898999999999999874
Q gi|254780457|r  151 EMVSRGEKVDYVKILEDLRNRDNQ--DRNRSYCPLVRDKDAYFFDTS-EMDIGTMCKVAKGLIDTKL  214 (217)
Q Consensus       151 el~~~g~~~~~~ev~~~i~~RD~~--D~~R~~sPL~~a~DAi~IDTs-~lsi~ev~~~i~~~I~~kl  214 (217)
T Consensus       114 --~~R~~~~~-~e~i~~m~~r~E~P~~~nrWdspl------f~i~~~~~~~~~~i~~~l~e~~~~~~  171 (249)
T TIGR03574       114 --IERGEKIP-NEVIKDMYEKFDEPGTKYSWDLPD------ITIDTTKKIDYNEILEEILEISENKL  171 (249)
T ss_pred             --HHCCCCCC-HHHHHHHHHHHCCCCCCCCCCCCC------EEECCCCCCCHHHHHHHHHHHHHCCC
T ss_conf             --60689999-999999999707999898655781------68428988899999999999851479