HHsearch alignment for GI: 254780457 and conserved domain: TIGR03574
>TIGR03574 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Members of this protein are L-seryl-tRNA(Sec) kinase. This enzyme is part of a two-step pathway in Eukaryota and Archaea for performing selenocysteine biosynthesis by changing serine misacylated on selenocysteine-tRNA to selenocysteine. This enzyme performs the first step, phosphorylation of the OH group of the serine side chain. This family represents archaeal proteins with this activity.
Probab=98.08 E-value=0.00019 Score=47.45 Aligned_cols=147 Identities=23% Similarity=0.359 Sum_probs=83.1
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCC-----EEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
Q ss_conf 9866687789678999999981783-----56202899999852321011101465533332101112444444320121
Q gi|254780457|r 11 IAIDGTAAAGKGVLSRFIALEYGFH-----YLDTGLIYRAVAKNILDAGISLDDEKMAIKIAQNIVLSNLDKAQLSSNAI 85 (217)
Q Consensus 11 IaIDGpagsGKsT~ak~lA~~l~~~-----~ldtG~~YR~~a~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lr~~~I 85 (217)
T Consensus 2 ivl~GlP~SGKSt~a~~L~~~l~~~~~~~i~~~~d~~~~~~~---------~~~-------------------------- 46 (249)
T TIGR03574 2 IILTGLPGVGKSTFSKELSKKLSEKNIDNIILGTDLIRESFP---------VWK-------------------------- 46 (249)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHH---------HCC--------------------------
T ss_conf 789678999899999999999998299659965520021200---------033--------------------------
Q ss_pred HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEC---------------CCHHHHHHCCCCEEEEEECCHHHHHHHHHH
Q ss_conf 00111122057899998878888763038846206---------------412556630388689984488889999866
Q gi|254780457|r 86 ANVASQVASIDSVRDALIDIQRSFAQNKLGVILDG---------------RDIGTIIFPDARIKFYVTASLDIRARRRYN 150 (217)
Q Consensus 86 ~~~~S~iA~~p~VR~~l~~~Qr~~~~~~~g~V~EG---------------RDigTvVfPdA~~KifL~As~e~RA~RR~~ 150 (217)
T Consensus 47 ------~~~Ek~~r~~~~~~v~~~l~~~~~vI~D~~nYiKg~RYEL~clAk~~~t-----~~c~I~~~~p~e~c~~~N-- 113 (249)
T TIGR03574 47 ------EKYEEFIRDSTLYLIKTALKNKYSVIVDDTNYYNSKRRDLINIAKEYNK-----NYIIIYLKAPLDTLLRRN-- 113 (249)
T ss_pred ------HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCC-----CEEEEEECCCHHHHHHHH--
T ss_conf ------6779998999999999984337669972732788999999999998499-----869999739999999987--
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHH--CCCCCCCCCCCCCCEEEEECC-CCCHHHHHHHHHHHHHHHH
Q ss_conf 776521113569999999998561--023675785379973999778-9898999999999999874
Q gi|254780457|r 151 EMVSRGEKVDYVKILEDLRNRDNQ--DRNRSYCPLVRDKDAYFFDTS-EMDIGTMCKVAKGLIDTKL 214 (217)
Q Consensus 151 el~~~g~~~~~~ev~~~i~~RD~~--D~~R~~sPL~~a~DAi~IDTs-~lsi~ev~~~i~~~I~~kl 214 (217)
T Consensus 114 --~~R~~~~~-~e~i~~m~~r~E~P~~~nrWdspl------f~i~~~~~~~~~~i~~~l~e~~~~~~ 171 (249)
T TIGR03574 114 --IERGEKIP-NEVIKDMYEKFDEPGTKYSWDLPD------ITIDTTKKIDYNEILEEILEISENKL 171 (249)
T ss_pred --HHCCCCCC-HHHHHHHHHHHCCCCCCCCCCCCC------EEECCCCCCCHHHHHHHHHHHHHCCC
T ss_conf --60689999-999999999707999898655781------68428988899999999999851479