HHsearch alignment for GI: 254780457 and conserved domain: cd00009
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Probab=96.82 E-value=0.0013 Score=42.45 Aligned_cols=38 Identities=29% Similarity=0.439 Sum_probs=27.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH---CCC--EEECCHHHHHHH
Q ss_conf 89866687789678999999981---783--562028999998
Q gi|254780457|r 10 IIAIDGTAAAGKGVLSRFIALEY---GFH--YLDTGLIYRAVA 47 (217)
Q Consensus 10 iIaIDGpagsGKsT~ak~lA~~l---~~~--~ldtG~~YR~~a 47 (217)
T Consensus 21 ~ill~GppGtGKT~la~~ia~~~~~~~~~~~~~~~~~~~~~~~ 63 (151)
T cd00009 21 NLLLYGPPGTGKTTLARAIANELFRPGAPFLYLNASDLLEGLV 63 (151)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHCCHHHH
T ss_conf 0899899998865999999997121379827854777046777