HHsearch alignment for GI: 254780457 and conserved domain: cd01120

>cd01120 RecA-like_NTPases RecA-like NTPases. This family includes the NTP binding domain of F1 and V1 H+ATPases, DnaB and related helicases as well as bacterial RecA and related eukaryotic and archaeal recombinases. This group also includes bacterial conjugation proteins and related DNA transfer proteins involved in type II and type IV secretion.

Probab=94.28  E-value=0.046  Score=33.21  Aligned_cols=39  Identities=23%  Similarity=0.336  Sum_probs=29.3

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHH-----CCCEEECCHHHHHHHH
Q ss_conf             89866687789678999999981-----7835620289999985
Q gi|254780457|r   10 IIAIDGTAAAGKGVLSRFIALEY-----GFHYLDTGLIYRAVAK   48 (217)
Q Consensus        10 iIaIDGpagsGKsT~ak~lA~~l-----~~~~ldtG~~YR~~a~   48 (217)
T Consensus         1 ~~li~g~~g~GKttl~~~~~~~~~~~~~~~~~~~~ee~~~q~~~   44 (165)
T cd01120           1 LILVFGPTGSGKTTLALQLALNIATKGGKVVYVDIEEEIEELTE   44 (165)
T ss_pred             CEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHH
T ss_conf             98999899998999999999998763997999986664489999