HHsearch alignment for GI: 254780457 and conserved domain: cd03114
>cd03114 ArgK-like The function of this protein family is unkown. The protein sequences are similar to the ArgK protein in E. coli. ArgK protein is a membrane ATPase which is required for transporting arginine, ornithine and lysine into the cells by the arginine and ornithine (AO system) and lysine, arginine and ornithine (LAO) transport systems.
Probab=93.52 E-value=0.059 Score=32.58 Aligned_cols=119 Identities=14% Similarity=0.094 Sum_probs=52.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCC
Q ss_conf 89866687789678999999981783562028999998523210111014655333321011124444443201210011
Q gi|254780457|r 10 IIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLIYRAVAKNILDAGISLDDEKMAIKIAQNIVLSNLDKAQLSSNAIANVA 89 (217)
Q Consensus 10 iIaIDGpagsGKsT~ak~lA~~l~~~~ldtG~~YR~~a~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lr~~~I~~~~ 89 (217)
T Consensus 1 viGitG~pGaGKStLi~~l~~~~~~~g~-------~VaVlavDPsS~~sgGalLGDRiRm~~~~~~~~vfiRs~atrg~~ 73 (148)
T cd03114 1 VIGITGVPGAGKSTLIDALITALRARGK-------RVAVLAIDPSSPFSGGAILGDRIRMERHASDPGVFIRSLATRGFL 73 (148)
T ss_pred CEEECCCCCCCHHHHHHHHHHHHHHCCC-------EEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCC
T ss_conf 9762589978789999999999997898-------379999688878668620323545344157998368634666654
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCEEEE--CCCHHHHHHCC-CCEEEEEECC
Q ss_conf 112205789999887888876303884620--64125566303-8868998448
Q gi|254780457|r 90 SQVASIDSVRDALIDIQRSFAQNKLGVILD--GRDIGTIIFPD-ARIKFYVTAS 140 (217)
Q Consensus 90 S~iA~~p~VR~~l~~~Qr~~~~~~~g~V~E--GRDigTvVfPd-A~~KifL~As 140 (217)
T Consensus 74 ggla--~~~~~~i~~l~-~--~g~D~IiIETvGvGQse~~i~~~aD~~i~v~~p 122 (148)
T cd03114 74 GGLS--RATPEVIRVLD-A--AGFDVIIVETVGVGQSEVDIASMADTTVVVMAP 122 (148)
T ss_pred CCHH--HHHHHHHHHHH-H--CCCCEEEEECCCCCCCHHHHHHHCCEEEEEECC
T ss_conf 2046--88999999999-7--599989997487775602655435669999636