HHsearch alignment for GI: 254780457 and conserved domain: cd03230
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=93.72 E-value=0.063 Score=32.43 Aligned_cols=32 Identities=34% Similarity=0.452 Sum_probs=25.7
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCHH
Q ss_conf 81898666877896789999999817835620289
Q gi|254780457|r 8 SIIIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLI 42 (217)
Q Consensus 8 ~~iIaIDGpagsGKsT~ak~lA~~l~~~~ldtG~~ 42 (217)
T Consensus 26 Gei~gl~G~NGaGKSTLl~~i~---Gl~~p~~G~i 57 (173)
T cd03230 26 GEIYGLLGPNGAGKTTLIKIIL---GLLKPDSGEI 57 (173)
T ss_pred CCEEEEECCCCCCHHHHHHHHH---CCCCCCCCEE
T ss_conf 9399998789979999999997---6857787889