HHsearch alignment for GI: 254780457 and conserved domain: cd03256
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=96.27 E-value=0.0034 Score=39.99 Aligned_cols=31 Identities=26% Similarity=0.272 Sum_probs=23.9
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCH
Q ss_conf 8189866687789678999999981783562028
Q gi|254780457|r 8 SIIIAIDGTAAAGKGVLSRFIALEYGFHYLDTGL 41 (217)
Q Consensus 8 ~~iIaIDGpagsGKsT~ak~lA~~l~~~~ldtG~ 41 (217)
T Consensus 27 Ge~~~iiGpsGsGKSTLl~~i~gl~---~p~~G~ 57 (241)
T cd03256 27 GEFVALIGPSGAGKSTLLRCLNGLV---EPTSGS 57 (241)
T ss_pred CCEEEEECCCCCHHHHHHHHHHCCC---CCCCEE
T ss_conf 9899999999833999999997499---998559