HHsearch alignment for GI: 254780457 and conserved domain: cd03259
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.31 E-value=0.015 Score=36.15 Aligned_cols=32 Identities=34% Similarity=0.368 Sum_probs=24.3
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCHH
Q ss_conf 81898666877896789999999817835620289
Q gi|254780457|r 8 SIIIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLI 42 (217)
Q Consensus 8 ~~iIaIDGpagsGKsT~ak~lA~~l~~~~ldtG~~ 42 (217)
T Consensus 26 Gei~~iiGpnGaGKSTl~~~i~Gl~---~p~~G~I 57 (213)
T cd03259 26 GEFLALLGPSGCGKTTLLRLIAGLE---RPDSGEI 57 (213)
T ss_pred CCEEEEECCCCCHHHHHHHHHHCCC---CCCCEEE
T ss_conf 9899999999973999999997599---9897089