HHsearch alignment for GI: 254780457 and conserved domain: pfam00485
>pfam00485 PRK Phosphoribulokinase / Uridine kinase family. In Arabidopsis the region carries two binding domains, a phosphoribosylpyrophosphate-binding domain and, at the very C-terminus, a uracil-binding domain.
Probab=99.13 E-value=6.5e-10 Score=80.12 Aligned_cols=164 Identities=13% Similarity=0.190 Sum_probs=86.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCC-----------EEECCHHHHHHHHHHHH----CCCCH-----HHHHHHHHHHHH
Q ss_conf 89866687789678999999981783-----------56202899999852321----01110-----146553333210
Q gi|254780457|r 10 IIAIDGTAAAGKGVLSRFIALEYGFH-----------YLDTGLIYRAVAKNILD----AGISL-----DDEKMAIKIAQN 69 (217)
Q Consensus 10 iIaIDGpagsGKsT~ak~lA~~l~~~-----------~ldtG~~YR~~a~~~~~----~~~~~-----~~~~~~~~~~~~ 69 (217)
T Consensus 1 iIgIaG~SgSGKTT~a~~L~~~l~~~~~~~~~~~~d~~~~~d~~~~~~~~~~~~~~~~~~~~~d~P~a~d~~ll~~~l~~ 80 (196)
T pfam00485 1 IIGVAGSSGAGKTTVARTFVSIFGREGVPAAGIEGDSFHRYDRFYMDLHMEDRKRAGNNHYSFFSPEANDFDLLYEQFKE 80 (196)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 98998998571999999999996605877641243179860410244375767651457889789662359999999999
Q ss_pred CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHH--HHHHCCCCEEEEEECCHHHHHHH
Q ss_conf 1112444444320121001111220578999988788887630388462064125--56630388689984488889999
Q gi|254780457|r 70 IVLSNLDKAQLSSNAIANVASQVASIDSVRDALIDIQRSFAQNKLGVILDGRDIG--TIIFPDARIKFYVTASLDIRARR 147 (217)
Q Consensus 70 i~~~~~~~~~lr~~~I~~~~S~iA~~p~VR~~l~~~Qr~~~~~~~g~V~EGRDig--TvVfPdA~~KifL~As~e~RA~R 147 (217)
T Consensus 81 Lk~g~~i~~P~Ydf~~~~r~--------------~~-~~~i~p~~viIvEGi~~l~~~~ir~l~D~kIfid~~~d~rl~R 145 (196)
T pfam00485 81 LKEGGSGDKPIYNHVTGEAD--------------PW-PELIEGADILFIEGLHGLYDERVAQLLDLKIYVDPDIDLELIQ 145 (196)
T ss_pred HHCCCCEEEEEEECCCCCCC--------------CC-CEECCCCCEEEEECHHHCCCHHHHHHHCEEEEEECCCCHHHHH
T ss_conf 70899457656751345336--------------77-3661788569994333303277887638479972680199999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
Q ss_conf 8667765211135699999999985610236757853799739
Q gi|254780457|r 148 RYNEMVSRGEKVDYVKILEDLRNRDNQDRNRSYCPLVRDKDAY 190 (217)
Q Consensus 148 R~~el~~~g~~~~~~ev~~~i~~RD~~D~~R~~sPL~~a~DAi 190 (217)
T Consensus 146 Ri~RD~~e-Rgrs~~~v~~q~~~v-~p~~~~fI~P~k~~ADli 186 (196)
T pfam00485 146 KIQRDMAE-RGHSLEGVTDSIERR-KPDYVNYICPQFSYADLI 186 (196)
T ss_pred HHHHCHHH-HCCCHHHHHHHHHHH-HHHHHHHCCCCHHHCCEE
T ss_conf 98734575-199999999999997-253896474785229889