HHsearch alignment for GI: 254780457 and conserved domain: pfam01745
>pfam01745 IPT Isopentenyl transferase. Isopentenyl transferase / dimethylallyl transferase synthesizes isopentenyladensosine 5'-monophosphate, a cytokinin that induces shoot formation on host plants infected with the Ti plasmid.
Probab=94.89 E-value=0.039 Score=33.70 Aligned_cols=129 Identities=23% Similarity=0.261 Sum_probs=66.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEEE--CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHC
Q ss_conf 89866687789678999999981783562--0289999985232101110146553333210111244444432012100
Q gi|254780457|r 10 IIAIDGTAAAGKGVLSRFIALEYGFHYLD--TGLIYRAVAKNILDAGISLDDEKMAIKIAQNIVLSNLDKAQLSSNAIAN 87 (217)
Q Consensus 10 iIaIDGpagsGKsT~ak~lA~~l~~~~ld--tG~~YR~~a~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lr~~~I~~ 87 (217)
T Consensus 3 l~~I~GpT~~GKT~~ai~lA~~~g~~iis~D~~Q~y~el~i---gs~rp~~~E---l~gT~RiYL~~R~---l~~----- 68 (232)
T pfam01745 3 LYLIWGATCTGKTAEAIALAKETGWPVIVLDRVQCCSQLAT---GSGRPLPAE---LQGTRRIYLDNRP---LSE----- 68 (232)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEEEECHHHHHHCCCC---CCCCCCHHH---HCCCCEEEECCCC---CCC-----
T ss_conf 68997887777169999999995997796203443001136---778999799---6575269861673---434-----
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHH------HHCCCC----EEEEEEC---CHHHHHHHHHHHHHH
Q ss_conf 111122057899998878888763038846206412556------630388----6899844---888899998667765
Q gi|254780457|r 88 VASQVASIDSVRDALIDIQRSFAQNKLGVILDGRDIGTI------IFPDAR----IKFYVTA---SLDIRARRRYNEMVS 154 (217)
Q Consensus 88 ~~S~iA~~p~VR~~l~~~Qr~~~~~~~g~V~EGRDigTv------VfPdA~----~KifL~A---s~e~RA~RR~~el~~ 154 (217)
T Consensus 69 --Gii~a~eA~~~-Li~~V~~~~~-~~glILEGGSISLl~~ma~~~~w~~~f~w~v~r~~l~d~~~f~~ra~~Rv~~ML~ 144 (232)
T pfam01745 69 --GIIDAEEAHDR-LIAEVTSHKD-EGGVILEGGSISLLKRMAQSPYWNAGFPWHVKRMRLPDRDVFLAQAKARVRQMLR 144 (232)
T ss_pred --CCCCHHHHHHH-HHHHHHCCCC-CCCEEEECCHHHHHHHHHHCHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCC
T ss_conf --66488999999-9999960466-7866872750999999975734148964899997479878999999999998628
Q ss_pred HH
Q ss_conf 21
Q gi|254780457|r 155 RG 156 (217)
Q Consensus 155 ~g 156 (217)
T Consensus 145 p~ 146 (232)
T pfam01745 145 PD 146 (232)
T ss_pred CC
T ss_conf 89