HHsearch alignment of GI: 254780459 and MMDB domain: 1vd4_A_
>1vd4_A (A:) Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens}
Probab=90.44 E-value=0.21 Score=29.12 Aligned_cols=29 Identities=14% Similarity=0.279 Sum_probs=23.8
Q ss_pred CCCCCCCCEE--------EECCCCCCCCCCCCCEECH
Q ss_conf 1178888744--------2148887227789871532
Q gi|254780459|r 10 RTCPDTGKRF--------YDLNKQVIVSPYTQNSWPL 38 (129)
Q Consensus 10 R~C~~Cg~KF--------YDlnk~PiiCP~CG~e~~~ 38 (129)
=+||.|++|| +|+...-.+|-+|++++..
T Consensus 15 y~Cp~C~~~ys~Lda~~Lld~~~~~F~C~~C~~el~e 51 (62)
T 1vd4_A 15 FKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEE 51 (62)
T ss_dssp EECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCEE
T ss_pred EECCCCCCEECHHHHHHHCCCCCCEEEECCCCCEEEC
T ss_conf 0998988994676698715978991973589999764