HHsearch alignment of GI: 254780459 and MMDB domain: 1vd4_A_

>1vd4_A (A:) Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens}
Probab=90.44  E-value=0.21  Score=29.12  Aligned_cols=29  Identities=14%  Similarity=0.279  Sum_probs=23.8

Q ss_pred             CCCCCCCCEE--------EECCCCCCCCCCCCCEECH
Q ss_conf             1178888744--------2148887227789871532
Q gi|254780459|r   10 RTCPDTGKRF--------YDLNKQVIVSPYTQNSWPL   38 (129)
Q Consensus        10 R~C~~Cg~KF--------YDlnk~PiiCP~CG~e~~~   38 (129)
                      =+||.|++||        +|+...-.+|-+|++++..
T Consensus        15 y~Cp~C~~~ys~Lda~~Lld~~~~~F~C~~C~~el~e   51 (62)
T 1vd4_A           15 FKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEE   51 (62)
T ss_dssp             EECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCEE
T ss_pred             EECCCCCCEECHHHHHHHCCCCCCEEEECCCCCEEEC
T ss_conf             0998988994676698715978991973589999764