HHsearch results for GI: 254780459 and protein with PDBid: 1vd4_A

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=91.44  E-value=0.1  Score=30.04  Aligned_cols=28  Identities=14%  Similarity=0.326  Sum_probs=23.0

Q ss_pred             CCCCCCCEE--------EECCCCCCCCCCCCCEECH
Q ss_conf             178888744--------2148887227789871532
Q gi|254780459|r   11 TCPDTGKRF--------YDLNKQVIVSPYTQNSWPL   38 (129)
Q Consensus        11 ~C~~Cg~KF--------YDlnk~PiiCP~CG~e~~~   38 (129)
                      +||.|+++|        +|+...-.+|-.||+++..
T Consensus        16 ~Cp~C~k~ys~Lda~~Lld~~~~~F~C~~C~~el~e   51 (62)
T 1vd4_A           16 KCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEE   51 (62)
T ss_dssp             ECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCEE
T ss_pred             ECCCCCCEECHHHHHHHCCCCCCEEEECCCCCEEEC
T ss_conf             888988882375598835967891973688999655