HHSEARCH alignment of GI: 254780459 and SCOP domain: d1nnqa2

Alignment

Probab=93.63  E-value=0.018  Score=33.26  Aligned_cols=29  Identities=21%  Similarity=0.258  Sum_probs=25.1

Q ss_pred             HHCCCCCCCCCCCEEEECCCCCCCCCCCCCE
Q ss_conf             2278311788887442148887227789871
Q gi|254780459|r    5 ELGTKRTCPDTGKRFYDLNKQVIVSPYTQNS   35 (129)
Q Consensus         5 elG~KR~C~~Cg~KFYDlnk~PiiCP~CG~e   35 (129)
                      |.++..+|+.||--+.+  .-|-.||-||+-
T Consensus         1 E~~~~~~C~vCG~i~~g--~~P~~CPvCg~~   29 (37)
T d1nnqa2           1 EIKKVYICPICGYTAVD--EAPEYCPVCGAP   29 (37)
T ss_dssp             CCSCEEECTTTCCEEES--CCCSBCTTTCCB
T ss_pred             CCCCEEECCCCCCEECC--CCCCCCCCCCCC
T ss_conf             97767989989988618--778848889985

SCOP domain information

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]