RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= gi|254780459|ref|YP_003064872.1| hypothetical protein CLIBASIA_01720 [Candidatus Liberibacter asiaticus str. psy62] (129 letters) >2dyt_A Autophagy-related protein 3; E2 fold, ligase; 2.50A {Saccharomyces cerevisiae} (A:) Length = 312 Score = 24.2 bits (52), Expect = 6.4 Identities = 8/66 (12%), Positives = 28/66 (42%) Query: 56 LEEETEVKPFVKHTSEEEEESPISKEEDDTSLDMEYVQEMDLDDDDDFLEQNDTDTDTDV 115 +E +V ++ +E + +P +D + D++ + + ++D + + Sbjct: 101 DGDEDDVLEYIGSETEHVQSTPAGGTKDSSIDDIDELIQDMEIKEEDENDDTEEFNAKGG 160 Query: 116 VDMDIS 121 + D++ Sbjct: 161 LAKDMA 166 >1zps_A PRA-CH, phosphoribosyl-AMP cyclohydrolase; histidine biosynthesis; 1.70A {Methanothermobacterthermautotrophicus} (A:1-105) Length = 105 Score = 24.3 bits (53), Expect = 6.7 Identities = 5/23 (21%), Positives = 15/23 (65%) Query: 82 EDDTSLDMEYVQEMDLDDDDDFL 104 + ++S ++ V+++ +D D D + Sbjct: 69 KGESSGHVQRVKDVLVDCDGDAV 91 >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* (A:1-124,A:319-377) Length = 183 Score = 23.9 bits (52), Expect = 8.1 Identities = 6/12 (50%), Positives = 7/12 (58%) Query: 85 TSLDMEYVQEMD 96 TS+ E VQ D Sbjct: 113 TSIAYETVQTAD 124 >1rxt_A Myristoyl-, glycylpeptide N-tetradecanoyltransferase 1; alpha-beta structure, unique N-myristoyltransferase fold; 3.00A {Homo sapiens} (A:) Length = 496 Score = 23.9 bits (51), Expect = 8.9 Identities = 5/77 (6%), Positives = 13/77 (16%) Query: 42 EAPTSPEKEKEICSLEEETEVKPFVKHTSEEEEESPISKEEDDTSLDMEYVQEMDLDDDD 101 E EE + + + K++ + + D Sbjct: 20 MEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKKQKKKKEKGSETDSAQDQPV 79 Query: 102 DFLEQNDTDTDTDVVDM 118 + Sbjct: 80 KMNSLPAERIQEIQKAI 96 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.305 0.128 0.361 Gapped Lambda K H 0.267 0.0662 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 1,010,838 Number of extensions: 43697 Number of successful extensions: 143 Number of sequences better than 10.0: 1 Number of HSP's gapped: 126 Number of HSP's successfully gapped: 49 Length of query: 129 Length of database: 4,956,049 Length adjustment: 77 Effective length of query: 52 Effective length of database: 2,353,064 Effective search space: 122359328 Effective search space used: 122359328 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.9 bits) S2: 50 (23.2 bits)