HHsearch alignment for GI: 254780460 and conserved domain: cd03441
>cd03441 R_hydratase_like (R)-hydratase [(R)-specific enoyl-CoA hydratase]. Catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. The structure of the monomer includes a five-strand antiparallel beta-sheet wrapped around a central alpha helix, referred to as a hot dog fold. The active site lies within a substrate-binding tunnel formed by the homodimer. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit.
Probab=96.49 E-value=0.06 Score=31.89 Aligned_cols=91 Identities=11% Similarity=0.064 Sum_probs=54.7
Q ss_pred CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECC-CCEEE
Q ss_conf 55300455689952112757888799886401233468826676304511410233798579999998896307-85799
Q gi|254780460|r 64 NLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRG-RVVLG 142 (172)
Q Consensus 64 d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~-~~~~~ 142 (172)
T Consensus 31 D~~~a~~~~~~~~ia~G~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~f~~pv~~GD-tl~~~~~v~~~~~~~~~~~v 105 (127)
T cd03441 31 DPEYAKAAGFGGRIAHGMLTLSLASGLLVQWLP---G-TDGANLGSQSVRFLAPVFPGD-TLRVEVEVLGKRPSKGRGVV 105 (127)
T ss_pred CHHHHHHCCCCCCEECCHHHHHHHHHHHHHHCC---C-CCCEEEEEEEEEEECCCCCCC-EEEEEEEEEEEEECCCCCEE
T ss_conf 688883578986231554499999999988706---6-551356564886504679999-99999999999975997099
Q ss_pred EEEEEEEE-CCEEEEEEE
Q ss_conf 99999999-999999997
Q gi|254780460|r 143 AADGWVKV-NGKEIYQAN 159 (172)
Q Consensus 143 ~~~g~~~v-dg~~i~~a~ 159 (172)
T Consensus 106 ~~~~~~~nq~~~~v~~g~ 123 (127)
T cd03441 106 TVRTEARNQGGEVVLSGE 123 (127)
T ss_pred EEEEEEEECCCCEEEEEE
T ss_conf 999999979999999999