HHsearch alignment of GI: 254780460 and MMDB domain: 1o0i_A_
>1o0i_A (A:) Hypothetical protein HI1161; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.70A {Haemophilus influenzae}
Probab=96.99 E-value=0.026 Score=33.68 Aligned_cols=128 Identities=11% Similarity=-0.044 Sum_probs=82.4
Q ss_pred CCCCHHHHHHHCCCCCCCCCCCCCCCCC--CEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHH
Q ss_conf 5589889998418835579988899864--12256899997184413423578875078655300455689952112757
Q gi|254780460|r 6 SSYTYEEILRCGEGEMFGEGNAQLPKPP--MLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLG 83 (172)
Q Consensus 6 ~~f~~~~i~~~~~g~~fg~~~~rLP~~p--~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~ 83 (172)
..++.+++..+ +.+| -.+=-++++++++ +++.+..++++ |.-....+-|..+
T Consensus 5 ~~~~~~~~~~~-------------~~~p~~~~lg~~i~~~~~g-------~~~~~~~~~~~------~~n~~g~~hGG~~ 58 (138)
T 1o0i_A 5 KTFTLENLNQL-------------CSNSAVSHLGIEISAFGED-------WIEATXPVDHR------TXQPFGVLHGGVS 58 (138)
T ss_dssp SCCCHHHHHHH-------------TSSSHHHHTTCEEEEECSS-------CEEEEEECSTT------TBCTTSSBCHHHH
T ss_pred CCCCHHHHHHH-------------CCCHHHHHCCCEEEEEECC-------EEEEEEECCHH------HCCCCCEECHHHH
T ss_conf 75899999765-------------6320888559899999699-------89999997989------9599980838999
Q ss_pred HHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEE
Q ss_conf 8887998864012334688266763045114102337985799999988963078579999999999-999999997106
Q gi|254780460|r 84 LDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLR 162 (172)
Q Consensus 84 iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~ 162 (172)
...+-.++++.+...-...........+++|.+++.+|+ ++.+.++ .+.++..++.+++++. ||+++++++...
T Consensus 59 ~~l~D~a~~~~~~~~~~~~~~~~t~~~~i~f~~p~~~g~--i~~~a~v---~~~g~~~~~~~~~i~~~~g~lva~~~~~~ 133 (138)
T 1o0i_A 59 VALAETIGSLAGSLCLEEGKTVVGLDINANHLRPVRSGK--VTARATP---INLGRNIQVWQIDIRTEENKLCCVSRLTL 133 (138)
T ss_dssp HHHHHHHHHHHHHHTSCTTEEEEEEEEEEEECSCCCSSE--EEEEEEE---EEECSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCE--EEEEEEE---EECCCCEEEEEEEEECCCCCEEEEEEEEE
T ss_conf 999999999999984688842688778899975688977--9999999---97488799999999918998999999999
Q ss_pred EE
Q ss_conf 99
Q gi|254780460|r 163 VC 164 (172)
Q Consensus 163 vg 164 (172)
+.
T Consensus 134 ~~ 135 (138)
T 1o0i_A 134 SV 135 (138)
T ss_dssp EE
T ss_pred EE
T ss_conf 99