HHsearch alignment of GI: 254780460 and MMDB domain: 3e29_A_
>3e29_A (A:) Uncharacterized protein Q7WE92_borbr; Q7WE92 NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Bordetella bronchiseptica}
Probab=94.66 E-value=0.32 Score=27.21 Aligned_cols=117 Identities=8% Similarity=0.049 Sum_probs=70.2
Q ss_pred CCCC--EEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
Q ss_conf 8641--22568999971844134235788750786553004556899521127578887998864012334688266763
Q gi|254780460|r 31 KPPM--LMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVS 108 (172)
Q Consensus 31 ~~p~--lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~ 108 (172)
.+|| .|=-+|++++++ +++.+..++++ +..+|. -.++-|..+...+--++++.+..... ......
T Consensus 15 ~~p~~~~lg~~i~~~~~g-------~~~~~~~~~~~--~~~~~~--~G~~hGG~l~~l~D~~~~~~~~~~~~--~~~vt~ 81 (144)
T 3e29_A 15 RSPFNRWLGXSVLEAGEQ-------GIVLGIKWREE--LISSPE--IRSTHGGILATLVDAAGDYAVALKTG--HPVPTX 81 (144)
T ss_dssp TCHHHHHTTCEEEEESSS-------CEEEEECCCGG--GBSCTT--TTCBCHHHHHHHHHHHHHHHHHHHHS--SCCCEE
T ss_pred CCCHHHHHCCEEEEEECC-------EEEEEEECCHH--HCCCCC--CCEEECCCCCCCCCCCCCEEEEECCC--CCEEEE
T ss_conf 685899809899999699-------99999992899--928888--86581453212345501013451169--832789
Q ss_pred ECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEE
Q ss_conf 045114102337985799999988963078579999999999-999999997106998
Q gi|254780460|r 109 VSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCL 165 (172)
Q Consensus 109 ~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl 165 (172)
-.++.|.+++.+|+ ++.+.+ +.+.++...+.+++++- ||+++++++-..+.+
T Consensus 82 ~~~i~fl~p~~~g~--v~~~a~---v~~~gr~~~~~~~~v~~~~g~~va~a~~t~~~~ 134 (144)
T 3e29_A 82 DXHVDYHRVATPGD--LRAEGQ---VIHFGKRFATAHARVLDXDGNLVASGRALYLIR 134 (144)
T ss_dssp EEEEEECSCCCSSC--EEEEEE---EEEECSSEEEEEEEEEETTCCEEEEEEEEEECC
T ss_pred EEEEEEECCCCCCE--EEEEEE---EEEECCCEEEEEEEEEECCCCEEEEEEEEEEEC
T ss_conf 98999962699977--999999---999489799999999979999999999999956