Query gi|254780460|ref|YP_003064873.1| 3-hydroxydecanoyl-(acyl carrier protein) dehydratase [Candidatus Liberibacter asiaticus str. psy62] Match_columns 172 No_of_seqs 131 out of 1572 Neff 6.8 Searched_HMMs 33803 Date Wed Jun 1 13:03:57 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780460.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 >2cf2_C Fatty acid synthase, D 100.0 0 0 338.4 19.8 168 3-170 173-340 (342) 2 >2cf2_C Fatty acid synthase, D 100.0 0 0 335.0 19.9 170 2-171 1-170 (342) 3 >1mka_A Beta-hydroxydecanoyl t 100.0 5.8E-42 0 269.3 21.9 170 2-171 1-170 (171) 4 >1z6b_A Pffabz, fatty acid syn 100.0 7.3E-32 2.2E-36 209.2 17.9 145 1-165 4-152 (154) 5 >2gll_A FABZ, (3R)-hydroxymyri 100.0 7.7E-32 2.3E-36 209.1 16.3 146 1-169 17-171 (171) 6 >1u1z_A (3R)-hydroxymyristoyl- 100.0 6.9E-31 2E-35 203.5 16.7 134 27-170 29-168 (168) 7 >3d6x_A (3R)-hydroxymyristoyl- 100.0 4.5E-30 1.3E-34 198.6 16.4 135 8-165 2-143 (146) 8 >3esi_A Uncharacterized protei 100.0 1.8E-29 5.2E-34 195.1 10.0 125 32-171 3-127 (129) 9 >2prx_A Thioesterase superfami 99.1 1.1E-09 3.2E-14 77.5 9.4 126 28-165 10-151 (160) 10 >2bi0_A Hypothetical protein R 99.0 1.4E-08 4.1E-13 70.9 12.4 142 4-165 11-161 (162) 11 >2qwz_A Phenylacetic acid degr 98.7 3.4E-07 1E-11 62.7 10.9 133 2-163 18-154 (159) 12 >1q6w_A Monoamine oxidase regu 98.6 3.7E-07 1.1E-11 62.4 10.0 139 29-169 7-159 (161) 13 >1ixl_A Hypothetical protein P 98.5 4E-06 1.2E-10 56.3 11.6 121 28-170 7-128 (131) 14 >3f1t_A Uncharacterized protei 98.3 1.7E-06 4.9E-11 58.6 7.2 130 9-163 2-137 (148) 15 >3ir3_A HTD2, 3-hydroxyacyl-th 98.3 4.2E-06 1.3E-10 56.2 9.2 103 59-169 44-146 (148) 16 >2f3x_A Transcription factor F 98.3 9.3E-05 2.8E-09 48.2 15.2 108 35-162 3-112 (118) 17 >2h4u_A Thioesterase superfami 98.2 0.00011 3.4E-09 47.7 13.7 118 28-163 19-142 (145) 18 >1iq6_A (R)-hydratase, (R)-spe 98.1 1.4E-05 4.3E-10 53.0 8.5 94 60-160 35-129 (134) 19 >2f41_A Transcription factor F 98.1 9E-05 2.7E-09 48.3 12.2 108 36-161 7-114 (121) 20 >2b3n_A Hypothetical protein A 98.0 6.1E-05 1.8E-09 49.3 9.4 90 61-161 66-155 (159) 21 >2cwz_A Thioesterase family pr 97.6 0.0018 5.3E-08 40.6 11.8 108 54-165 9-118 (141) 22 >2hbo_A Hypothetical protein ( 97.5 0.004 1.2E-07 38.5 11.9 104 54-169 43-146 (158) 23 >2pim_A Phenylacetic acid degr 97.4 0.0026 7.7E-08 39.6 10.5 111 37-163 26-136 (141) 24 >2c2i_A RV0130; hotdog, hydrat 97.3 0.0011 3.3E-08 41.8 7.5 130 29-165 14-149 (151) 25 >2uva_G Fatty acid synthase be 97.3 0.00083 2.4E-08 42.6 6.7 95 60-160 289-383 (388) 26 >1yoc_A Hypothetical protein P 97.2 0.014 4.2E-07 35.2 12.4 116 31-163 25-143 (147) 27 >1o0i_A Hypothetical protein H 97.0 0.026 7.6E-07 33.7 14.3 128 6-164 5-135 (138) 28 >2fs2_A Phenylacetic acid degr 96.9 0.03 9E-07 33.3 12.9 117 29-165 14-133 (151) 29 >3exz_A MAOC-like dehydratase; 96.7 0.03 8.9E-07 33.3 10.5 96 67-167 44-144 (154) 30 >2uv8_G Fatty acid synthase su 96.7 6.6E-05 2E-09 49.1 -3.2 117 31-160 259-378 (383) 31 >3gek_A Putative thioesterase 96.6 0.049 1.5E-06 32.0 13.6 108 49-166 24-132 (146) 32 >1zki_A Hypothetical protein P 96.5 0.057 1.7E-06 31.6 13.4 117 29-163 11-129 (133) 33 >3f5o_A Thioesterase superfami 96.5 0.065 1.9E-06 31.3 13.2 119 29-165 19-139 (148) 34 >2bi0_A Hypothetical protein R 96.4 0.066 1.9E-06 31.3 12.2 98 64-168 53-159 (175) 35 >1wlu_A PAAI protein, phenylac 95.8 0.14 4.2E-06 29.3 10.7 99 53-165 19-117 (136) 36 >1s9c_A Peroxisomal multifunct 95.5 0.046 1.4E-06 32.2 6.5 89 61-160 197-285 (298) 37 >3khp_A MAOC family protein; s 95.4 0.066 2E-06 31.3 6.7 92 61-160 211-304 (311) 38 >1pn2_A Peroxisomal hydratase- 95.3 0.067 2E-06 31.2 6.6 47 108-160 224-270 (280) 39 >3kg8_A CURJ; polyketide synth 95.3 0.22 6.4E-06 28.2 12.5 124 31-171 179-305 (308) 40 >3kg7_A CURH; polyketide synth 95.2 0.14 4.2E-06 29.3 8.2 122 31-168 165-288 (293) 41 >2ov9_A Hypothetical protein; 94.9 0.28 8.2E-06 27.6 9.3 101 53-166 110-211 (216) 42 >3e29_A Uncharacterized protei 94.7 0.32 9.3E-06 27.2 11.6 117 31-165 15-134 (144) 43 >3kg6_A CURF; polyketide synth 94.6 0.32 9.5E-06 27.2 8.9 76 53-134 18-96 (285) 44 >1q4t_A Thioesterase; hot-DOG, 94.6 0.33 9.8E-06 27.1 13.3 118 31-166 27-148 (151) 45 >2vz8_A Fatty acid synthase; t 93.5 0.36 1.1E-05 26.9 6.9 73 55-130 30-104 (277) 46 >3kg9_A CURK; polyketide synth 93.4 0.56 1.6E-05 25.8 7.9 74 54-133 24-100 (296) 47 >2eis_A Hypothetical protein T 93.2 0.61 1.8E-05 25.5 10.0 101 55-166 4-111 (133) 48 >3kg7_A CURH; polyketide synth 93.1 0.37 1.1E-05 26.8 6.5 60 28-93 3-64 (293) 49 >1sh8_A Hypothetical protein P 91.4 1 3E-05 24.2 9.1 122 31-168 17-150 (154) 50 >1vh9_A P15, hypothetical prot 91.3 1 3.1E-05 24.1 13.8 118 29-164 17-137 (149) 51 >3e8p_A Uncharacterized protei 91.2 1.1 3.2E-05 24.1 10.5 115 29-160 28-159 (164) 52 >2oiw_A Putative 4-hydroxybenz 89.9 1.4 4.1E-05 23.4 12.4 107 57-169 7-113 (136) 53 >1y7u_A Acyl-COA hydrolase; st 89.9 1.4 4.1E-05 23.4 11.1 103 53-166 18-126 (156) 54 >2gf6_A Conserved hypothetical 88.2 1.8 5.4E-05 22.7 11.3 107 56-168 8-117 (135) 55 >3hrq_A PKS, aflatoxin biosynt 88.1 1.9 5.5E-05 22.6 12.5 117 31-164 199-320 (357) 56 >1vh5_A Hypothetical protein Y 87.9 1.9 5.7E-05 22.5 14.6 119 29-165 17-138 (148) 57 >1t82_A Hypothetical acetyltra 87.7 2 5.8E-05 22.5 11.1 110 39-166 35-152 (155) 58 >1z54_A Probable thioesterase; 87.7 2 5.9E-05 22.5 9.7 66 100-169 49-114 (132) 59 >3bnv_A CJ0977; virulence fact 87.1 2.2 6.4E-05 22.3 13.3 118 29-168 26-146 (152) 60 >2egj_A Hypothetical protein A 86.8 2.2 6.6E-05 22.1 10.1 105 58-168 6-113 (128) 61 >3d6l_A Putative hydrolase; ho 85.5 2.6 7.7E-05 21.8 11.6 100 55-165 7-115 (120) 62 >2cye_A Conserved hypothetical 85.1 2.7 8.1E-05 21.6 11.2 105 56-167 7-111 (133) 63 >1s5u_A Protein YBGC; structur 84.5 2.9 8.5E-05 21.5 9.0 109 55-169 8-120 (125) 64 >2qq2_A Cytosolic acyl coenzym 83.1 3.3 9.8E-05 21.1 6.0 92 50-152 38-129 (193) 65 >3bjk_A Acyl-COA thioester hyd 82.7 3.4 0.0001 21.1 9.1 105 50-165 11-124 (153) 66 >2w3x_A CALE7; hydrolase, hotd 79.6 4.4 0.00013 20.4 9.8 108 55-168 7-120 (147) 67 >3dkz_A Thioesterase superfami 78.3 4.9 0.00014 20.1 13.7 115 31-165 12-129 (142) 68 >3el6_A Erythromycin dehydrata 76.3 5.6 0.00016 19.8 9.2 53 34-92 37-91 (313) 69 >2hx5_A Hypothetical protein; 76.3 5.6 0.00016 19.8 9.1 65 101-169 63-127 (152) 70 >2v1o_A Cytosolic acyl coenzym 76.2 5.6 0.00016 19.8 11.7 64 102-169 46-115 (151) 71 >2gvh_A AGR_L_2016P; 15159470, 75.6 5.8 0.00017 19.7 10.3 101 54-165 28-134 (155) 72 >2fuj_A Conserved hypothetical 73.7 6.5 0.00019 19.4 11.6 108 55-168 11-121 (137) 73 >2gvh_A AGR_L_2016P; 15159470, 69.9 7.9 0.00023 18.9 12.1 102 53-165 3-110 (133) 74 >2q78_A Uncharacterized protei 67.9 8.7 0.00026 18.6 11.7 104 55-163 24-129 (132) 75 >2q2b_A Cytosolic acyl coenzym 65.3 9.8 0.00029 18.3 7.0 92 50-152 22-113 (179) 76 >3hdu_A Putative thioesterase; 64.2 10 0.00031 18.2 8.8 53 104-161 100-153 (157) 77 >2o5u_A Thioesterase; putative 61.4 12 0.00034 17.9 11.2 108 55-168 15-125 (148) 78 >1vpm_A Acyl-COA hydrolase; NP 57.8 13 0.0004 17.5 10.0 88 53-151 22-109 (169) 79 >3ck1_A Putative thioesterase; 55.7 15 0.00043 17.3 10.2 108 55-168 6-119 (150) 80 >3e1e_A Thioesterase family pr 53.1 16 0.00048 17.1 14.1 109 39-165 27-139 (141) 81 >2oaf_A Thioesterase superfami 51.5 17 0.0005 16.9 11.6 107 56-168 18-130 (151) 82 >3hm0_A Probable thioesterase; 48.8 19 0.00056 16.7 13.6 106 56-167 38-150 (167) 83 >3b7k_A Acyl-coenzyme A thioes 47.4 20 0.00059 16.5 9.5 108 29-152 179-286 (333) 84 >2ali_A Hypothetical protein P 44.2 22 0.00066 16.2 12.2 108 55-168 30-140 (158) 85 >2own_A Putative oleoyl-[acyl- 43.2 23 0.00068 16.1 8.4 52 110-165 205-257 (262) 86 >2ccw_A Azurin II, AZN-2; elec 40.7 3.4 9.9E-05 21.1 -1.5 12 64-75 106-117 (129) 87 >2nuj_A Thioesterase superfami 40.1 26 0.00076 15.8 13.4 108 55-168 27-138 (163) 88 >1tbu_A Peroxisomal acyl-coenz 37.2 29 0.00085 15.6 8.9 47 109-159 65-111 (118) 89 >3hhd_A Fatty acid synthase; t 32.3 11 0.00033 18.0 0.0 68 62-132 155-224 (249) 90 >1njk_A Hypothetical protein Y 28.8 40 0.0012 14.7 10.5 109 55-169 23-135 (156) 91 >2hlj_A Hypothetical protein; 27.6 42 0.0012 14.6 10.5 105 58-168 9-118 (157) 92 >3bbj_A Putative thioesterase 27.3 42 0.0012 14.6 6.8 44 111-159 62-105 (272) 93 >3cjy_A Putative thioesterase; 26.9 43 0.0013 14.5 7.3 53 110-167 59-111 (259) 94 >2ess_A Acyl-ACP thioesterase; 23.8 49 0.0015 14.2 8.9 59 104-166 59-118 (248) 95 >1p5q_A FKBP52, FK506-binding 22.1 53 0.0016 14.0 2.3 29 112-140 107-135 (136) 96 >2i3t_B Spindle assembly check 20.3 56 0.0017 13.8 1.8 15 5-19 24-38 (54) No 1 >>2cf2_C Fatty acid synthase, DH domain; transferase, fatty acid metabolism, fatty acid biosynthesis, multienzyme; 4.30A {Sus scrofa} (C:) Probab=100.00 E-value=0 Score=338.39 Aligned_cols=168 Identities=55% Similarity=1.079 Sum_probs=121.2 Q ss_pred CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHH Q ss_conf 88655898899984188355799888998641225689999718441342357887507865530045568995211275 Q gi|254780460|r 3 NRKSSYTYEEILRCGEGEMFGEGNAQLPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCL 82 (172) Q Consensus 3 ~~~~~f~~~~i~~~~~g~~fg~~~~rLP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL 82 (172) .++.++++++++++++|++|++..+|||++||||||||+++++++|++++|+++|+|+|++|||||+||||++||||||| T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~Lp~~p~l~iDrv~~i~~~~g~~~~g~i~a~k~v~~dewff~gHf~~~PvmPG~L 252 (342) T 2cf2_C 173 DKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMTETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCL 252 (342) T ss_pred CCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCEECCCCCCCEECCCHH T ss_conf 55666560210013453114799888899872317889999169983235369999842766544737898870746189 Q ss_pred HHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEE Q ss_conf 78887998864012334688266763045114102337985799999988963078579999999999999999997106 Q gi|254780460|r 83 GLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLR 162 (172) Q Consensus 83 ~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~ 162 (172) ++|||+|++++++.+.+.+...++.++++||||++|+|||++++|+++|+++..++.++++++|+++|||++||++++++ T Consensus 253 ~iEa~~Q~~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~l~~~~~i~~v~~~~~~~~~~~g~~~vdg~~i~~~~~~~ 332 (342) T 2cf2_C 253 GLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASDLK 332 (342) T ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCCEEEEEEEEEEEEEECCCEEEEEEEEEEECCEEEEEEEEEE T ss_conf 99999999877630136788157710576289358706998999999999975078259999999999999999998349 Q ss_pred EEEECCCC Q ss_conf 99861768 Q gi|254780460|r 163 VCLTIDRG 170 (172) Q Consensus 163 vgl~~de~ 170 (172) +++++|+. T Consensus 333 ~~~~~~~~ 340 (342) T 2cf2_C 333 VGLFQDTS 340 (342) T ss_pred EEEEECCC T ss_conf 99994677 No 2 >>2cf2_C Fatty acid synthase, DH domain; transferase, fatty acid metabolism, fatty acid biosynthesis, multienzyme; 4.30A {Sus scrofa} (C:) Probab=100.00 E-value=0 Score=335.00 Aligned_cols=170 Identities=55% Similarity=1.063 Sum_probs=163.1 Q ss_pred CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHH Q ss_conf 88865589889998418835579988899864122568999971844134235788750786553004556899521127 Q gi|254780460|r 2 KNRKSSYTYEEILRCGEGEMFGEGNAQLPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGC 81 (172) Q Consensus 2 ~~~~~~f~~~~i~~~~~g~~fg~~~~rLP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGv 81 (172) +|+++|||+|||++||+|+.|||.++|||+|||||||||+++++++|++++|+++|||+|++|+|||+||||++|+|||| T Consensus 1 ~~k~~~f~~~~ll~~a~G~~fg~~~~RLP~pP~LlVDRV~~id~~~g~~~~G~i~ae~dV~~D~wyf~~hf~~~pvmPg~ 80 (342) T 2cf2_C 1 VDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMTETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGC 80 (342) T ss_pred CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCCC T ss_conf 98657999999997549971799988899998699998789926898524259999986799866532787799714523 Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEE Q ss_conf 57888799886401233468826676304511410233798579999998896307857999999999999999999710 Q gi|254780460|r 82 LGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDL 161 (172) Q Consensus 82 L~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l 161 (172) |++||++|++++++.+.+.+...+.+.+++++||++|.|++++++|+++++++.+++..+.+++|++++||+++++++++ T Consensus 81 l~iEa~~Q~~~~l~~~~g~~~~~~~l~~~~v~frg~v~p~~~~L~~~v~i~~~~~~~~~~~~~dg~~~vdG~~v~~~~~~ 160 (342) T 2cf2_C 81 LGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASDL 160 (342) T ss_pred HHHHHHHHHHHHHEECCCCCCCEEEEECCEEEECCCCCCCCEEEEEEEEEEEEEECCEEEEEEEEEEEECCEEEEEECCC T ss_conf 28899998765530014788732676623046834119998499999999999806717999979999899997885155 Q ss_pred EEEEECCCCC Q ss_conf 6998617688 Q gi|254780460|r 162 RVCLTIDRGV 171 (172) Q Consensus 162 ~vgl~~de~~ 171 (172) +++++.+... T Consensus 161 ~a~~~~~~~~ 170 (342) T 2cf2_C 161 KVGLFQDTSA 170 (342) T ss_pred CEEECCCCCC T ss_conf 2020123422 No 3 >>1mka_A Beta-hydroxydecanoyl thiol ester dehydrase; fatty acid biosynthesis; HET: DAC; 2.00A {Escherichia coli} (A:) Probab=100.00 E-value=5.8e-42 Score=269.29 Aligned_cols=170 Identities=55% Similarity=1.063 Sum_probs=161.2 Q ss_pred CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHH Q ss_conf 88865589889998418835579988899864122568999971844134235788750786553004556899521127 Q gi|254780460|r 2 KNRKSSYTYEEILRCGEGEMFGEGNAQLPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGC 81 (172) Q Consensus 2 ~~~~~~f~~~~i~~~~~g~~fg~~~~rLP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGv 81 (172) +|+|++||+++|+++++|..|++=-++||.+||+|||||++++++++.++.++++|+|+|++|+|||+||||++|+|||+ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~i~~~LP~~p~l~vDrV~~~~~~~~~~~~~~i~~~~~v~~d~~~~~~hf~g~pvlPg~ 80 (171) T 1mka_A 1 VDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMTETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGC 80 (171) T ss_dssp CCCCSCBCHHHHHHHHTTCSSCSSSCCCCCTTTCCCSEEEEEESSCTTTTSCEEEEEEECCTTSGGGGTTTTTSCCCCHH T ss_pred CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCHH T ss_conf 98657999999997549966889988899998783798899808998556655999984155510683046899758649 Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEE Q ss_conf 57888799886401233468826676304511410233798579999998896307857999999999999999999710 Q gi|254780460|r 82 LGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDL 161 (172) Q Consensus 82 L~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l 161 (172) +++|+|+|++++++.+......+++.++.++||+++|.||+++.++.+.++++.+.+..+++++++++|||+++++++.+ T Consensus 81 l~iE~~aQ~~~~~~~~~~~~~~~~l~~~~~~kf~~~v~PGd~l~~~~~~~~~~~~~~~~~~~~~~~~~v~g~~v~~~~~~ 160 (171) T 1mka_A 81 LGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASDL 160 (171) T ss_dssp HHHHHHHHHHHHHHHHTTCCSEEEEEEESCEEECSCCCTTCCEEEEEEEEEEEEESSSEEEEEEEEEEETTEEEEEEEEE T ss_pred HHHHHHHHHHHHEEEECCCCCCEEEEECCEEEEECCCCCCCEEEEEEEEEEEEEECCCEEEEEEEEEEECCEEEEEEECC T ss_conf 99999998852206820789836787422316834522199899999999999725738999999999899999999578 Q ss_pred EEEEECCCCC Q ss_conf 6998617688 Q gi|254780460|r 162 RVCLTIDRGV 171 (172) Q Consensus 162 ~vgl~~de~~ 171 (172) ++.++++++. T Consensus 161 ~~~~~~~~~~ 170 (171) T 1mka_A 161 KVGLFQDTSA 170 (171) T ss_dssp EEEEESCCTT T ss_pred EEEEEECCCC T ss_conf 9999846877 No 4 >>1z6b_A Pffabz, fatty acid synthesis protein; malaria, beta-hydroxyacyl-ACP dehydratase, fatty acid biosynthesis, SAD phasing, lyase; 2.09A {Plasmodium falciparum} (A:) Probab=100.00 E-value=7.3e-32 Score=209.25 Aligned_cols=145 Identities=22% Similarity=0.352 Sum_probs=126.7 Q ss_pred CCCCCCCCCHHHHHHHCCCCCCCCCCCCCC-CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEE Q ss_conf 988865589889998418835579988899-8641225689999718441342357887507865530045568995211 Q gi|254780460|r 1 MKNRKSSYTYEEILRCGEGEMFGEGNAQLP-KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMP 79 (172) Q Consensus 1 ~~~~~~~f~~~~i~~~~~g~~fg~~~~rLP-~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmP 79 (172) |.+++.++++++|.++ || ++||+|+|+|+++++++ .++++++|++|+|||+||||++|+|| T Consensus 4 m~~~~~~~~~~~i~~~------------lPhr~p~l~vD~i~~~~~~~------~~~~~~~v~~d~~~~~~hf~~~pi~P 65 (154) T 1z6b_A 4 MPNYDTSIDIEDIKKI------------LPHRYPFLLVDKVIYMQPNK------TIIGLKQVSTNEPFFNGHFPQKQIMP 65 (154) T ss_dssp ----CCCBCHHHHHHH------------CCCCTTSCCCCEEEEEETTT------EEEEEEECCTTSGGGGTSCTTSCCCC T ss_pred CCCCCCCCCHHHHHHH------------CCCCCCEEEEEEEEEEECCC------EEEEEEECCCCCCEEEECCCCCCCCH T ss_conf 9999987599999986------------79999847899999981796------79999982676435650567753026 Q ss_pred HHHHHHHHHHHHHHHCCCCCC---CCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEE Q ss_conf 275788879988640123346---88266763045114102337985799999988963078579999999999999999 Q gi|254780460|r 80 GCLGLDALWQLTGFFLGWLGE---LGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIY 156 (172) Q Consensus 80 GvL~iEa~~Ql~~~~~~~~~~---~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~ 156 (172) |++++|+|+|++++++..... ...+++.++.++||+++|.|||+ ++++++++++... ..++.++++++|||++++ T Consensus 66 g~l~iE~~aQ~~~~~~~~~~~~~~~~~~~l~~v~~~kf~~~v~pGd~-L~~~v~~~~~~~~-~~~~~~~~~~~v~g~~v~ 143 (154) T 1z6b_A 66 GVLQIEALAQLAGILCLKSDDSQKNNLFLFAGVDGVRWKKPVLPGDT-LTMQANLISFKSS-LGIAKLSGVGYVNGKVVI 143 (154) T ss_dssp HHHHHHHHHHHHHHHHHHHC----CCCEEEEEEEEEEECSCCCTTCE-EEEEEEEEEEETT-TTEEEEEEEEEETTEEEE T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEEEECCCE-EEEEEEEEEEECC-CCEEEEEEEEEECCEEEE T ss_conf 78999999877767665155334682899984012099300754879-9999999997067-629999999999999999 Q ss_pred EEEEEEEEE Q ss_conf 997106998 Q gi|254780460|r 157 QANDLRVCL 165 (172) Q Consensus 157 ~a~~l~vgl 165 (172) +++...+.. T Consensus 144 ~~~~~~~~~ 152 (154) T 1z6b_A 144 NISEMTFAL 152 (154) T ss_dssp EEEEEEEEE T ss_pred EEEEEEEEE T ss_conf 925159999 No 5 >>2gll_A FABZ, (3R)-hydroxymyristoyl-acyl carrier protein dehydratase; lyase; 2.20A {Helicobacter pylori} PDB: 2glm_A* 2glp_A* 2glv_A 3dp1_A* 3cf8_A* 3cf9_A* 3d04_A* 3doy_A* 3doz_A* 3dp0_A* 3b7j_A* 3dp2_A* 3dp3_A* 3ed0_A* (A:) Probab=100.00 E-value=7.7e-32 Score=209.13 Aligned_cols=146 Identities=29% Similarity=0.425 Sum_probs=123.3 Q ss_pred CCCCCCCCCHHHHHHHCCCCCCCCCCCCCC-CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEE Q ss_conf 988865589889998418835579988899-8641225689999718441342357887507865530045568995211 Q gi|254780460|r 1 MKNRKSSYTYEEILRCGEGEMFGEGNAQLP-KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMP 79 (172) Q Consensus 1 ~~~~~~~f~~~~i~~~~~g~~fg~~~~rLP-~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmP 79 (172) +.++..++++++|.++ || ++||+|||||+++++++ .++++++|+.|+|||+||||++|+|| T Consensus 17 ~~~~~~~~~~~~i~~~------------lPhr~P~l~iD~i~~~~~~~------~i~~~~~v~~d~~~~~ghf~~~pv~P 78 (171) T 2gll_A 17 HQNLQSQFFIEHILQI------------LPHRYPMLLVDRITELQANQ------KIVAYKNITFNEDVFNGHFPNKPIFP 78 (171) T ss_dssp ---CCSCEEHHHHHHH------------CCCCTTSCCCCEEEEEETTT------EEEEEEECCSCSTHHHHSCTTSCCCC T ss_pred HHCCCCCCCHHHHHHH------------CCCCCCEEEEEEEEEECCCC------EEEEEEEECCCCCEEECCCCCCCEEE T ss_conf 2220357599999986------------89999849899999982898------79999985688866733678997874 Q ss_pred HHHHHHHHHHHHHHHCCCCC--------CCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEEC Q ss_conf 27578887998864012334--------6882667630451141023379857999999889630785799999999999 Q gi|254780460|r 80 GCLGLDALWQLTGFFLGWLG--------ELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVN 151 (172) Q Consensus 80 GvL~iEa~~Ql~~~~~~~~~--------~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vd 151 (172) ||+++|+|+|++++++.+.. ....+++.++.++||+++|.||++ +++++++. ..+..++++++++++| T Consensus 79 gvlliE~~aQ~~~~~~~~~~~~~~~~~~~~~~g~l~~i~~~~f~~~v~pGd~-l~~~~~~~---~~~~~~~~~~~~~~v~ 154 (171) T 2gll_A 79 GVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDR-LEYHLEVL---KHKGMIWQVGGTAQVD 154 (171) T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSCHHHHTTEEEEEEEEEEEEECSCCCTTCE-EEEEEEEE---EESSSEEEEEEEEEET T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCE-EEEEEEEE---EEECCEEEEEEEEEEC T ss_conf 6889999999988997551255421256773468740104789663299988-99999999---9768899999999999 Q ss_pred CEEEEEEEEEEEEEECCC Q ss_conf 999999971069986176 Q gi|254780460|r 152 GKEIYQANDLRVCLTIDR 169 (172) Q Consensus 152 g~~i~~a~~l~vgl~~de 169 (172) |+++++++ +.+.+.++| T Consensus 155 g~~va~g~-l~~~~~~~e 171 (171) T 2gll_A 155 GKVVAEAE-LKAMIAERE 171 (171) T ss_dssp TEEEEEEE-EEEEEEECC T ss_pred CEEEEEEE-EEEEEECCC T ss_conf 99999999-999997589 No 6 >>1u1z_A (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; fatty acid biosynthesis, hot DOG fold, lyase; 2.50A {Pseudomonas aeruginosa} (A:) Probab=99.97 E-value=6.9e-31 Score=203.46 Aligned_cols=134 Identities=22% Similarity=0.298 Sum_probs=112.3 Q ss_pred CCCC-CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCC-----CCC Q ss_conf 8899-8641225689999718441342357887507865530045568995211275788879988640123-----346 Q gi|254780460|r 27 AQLP-KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGW-----LGE 100 (172) Q Consensus 27 ~rLP-~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~-----~~~ 100 (172) +.|| ++||+|||||++++..++ .++++++|++|+|||+||||++|+||||+++|+|+|++++++.+ ... T Consensus 29 ~~lPhr~P~llvD~i~~~~~~~~-----~~~~~~~v~~~~~~~~~hf~~~pv~Pg~l~iE~~aQ~~~~~~~~~~~~~~~~ 103 (168) T 1u1z_A 29 EYLPHRYPFLLVDRVVELDIEGK-----RIRAYKNVSINEPFFNGHFPEHPIXPGVLIIEAXAQAAGILGFKXLDVKPAD 103 (168) T ss_dssp TTCCCCTTSCCCCEEEEEETTTT-----EEEEEEECCTTSTTGGGSCTTSCCCCHHHHHHHHHHHHHHHHHHHHTCCC-- T ss_pred HHCCCCCCEEEEEEEEEEECCCC-----EEEEEEEECCCCCEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCC T ss_conf 86899998698999999805998-----8999999778853462466886168766688999999999886412555788 Q ss_pred CCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEECCCC Q ss_conf 8826676304511410233798579999998896307857999999999999999999710699861768 Q gi|254780460|r 101 LGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTIDRG 170 (172) Q Consensus 101 ~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~de~ 170 (172) ...+++.++.++||+++|.||++ +++++++++ .+..++++++++++||+++++++ +.+.+.++++ T Consensus 104 ~~~~~l~~i~~~~f~~~v~pGd~-L~i~~~~~~---~~~~~~~~~~~~~~~g~~va~g~-l~~~~~~~~e 168 (168) T 1u1z_A 104 GTLYYFVGSDKLRFRQPVLPGDQ-LQLHAKFIS---VKRSIWKFDCHATVDDKPVCSAE-IICAERKLGS 168 (168) T ss_dssp -CEEEEEEEEEEEECSCCCTTCE-EEEEEEEEE---EETTEEEEEEEEEETTEEEEEEE-EEEEEEC--- T ss_pred CCEEEEEECCEEEEEEEECCCCE-EEEEEEEEE---EECCEEEEEEEEEECCEEEEEEE-EEEEEECCCC T ss_conf 83999972458999004148999-999999999---65899999999999999999999-9999713689 No 7 >>3d6x_A (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; FABZ, hot DOG fold, cytoplasm, lipid A biosynthesis, lipid synthesis; HET: MSE; 2.59A {Campylobacter jejuni subsp} (A:) Probab=99.97 E-value=4.5e-30 Score=198.61 Aligned_cols=135 Identities=26% Similarity=0.343 Sum_probs=113.7 Q ss_pred CCHHHHHHHCCCCCCCCCCCCCC-CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHH Q ss_conf 89889998418835579988899-86412256899997184413423578875078655300455689952112757888 Q gi|254780460|r 8 YTYEEILRCGEGEMFGEGNAQLP-KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDA 86 (172) Q Consensus 8 f~~~~i~~~~~g~~fg~~~~rLP-~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa 86 (172) .|.++|.++ || ++||+|||||+++++++ +++|+++|++|+|||+||||++|+|||++++|+ T Consensus 2 m~~~~I~~~------------lPhr~pml~vD~v~~~~~~~------~i~~~~~v~~d~~~~~~hf~~~p~lPg~l~iE~ 63 (146) T 3d6x_A 2 IDVXQIQEI------------LPHRYPFLLVDKITELKVKE------VVLGYKNISISDHVFXGHFPGHPIYPGVLILEG 63 (146) T ss_dssp BCHHHHHHH------------CCCCTTSCCCCEEEEEETTT------EEEEEEECCTTBTHHHHSCTTSCCCCHHHHHHH T ss_pred CCHHHHHHH------------CCCCCCEEEEEEEEEECCCC------EEEEEEEECCCCCEEEECCCCCCCCCEEHHHHH T ss_conf 897999986------------89998939899999982998------899999944788678622699975101358999 Q ss_pred HHHHHHHHCCCCCC------CCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEE Q ss_conf 79988640123346------882667630451141023379857999999889630785799999999999999999971 Q gi|254780460|r 87 LWQLTGFFLGWLGE------LGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQAND 160 (172) Q Consensus 87 ~~Ql~~~~~~~~~~------~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~ 160 (172) |+|++++++.+... +...++.++.++||+++|.||+++ ++++++.+ .....+.+++++++||+++++++ T Consensus 64 ~aQ~~~~~~~~~~~~~~~~~~~~~~l~~v~~~~f~~~v~pG~~l-~i~~~~~~---~~~~~~~~~~~~~v~g~~i~~g~- 138 (146) T 3d6x_A 64 XAQTGGVLAFESXEDKVDPKSKVVYFTGIDGAKFRNPVRPGDRL-DYEXSVVK---NRGNXWIFKGQAFVDGNLVAEAE- 138 (146) T ss_dssp HHHHHHHHHHTC-------CCSCEEEEEEEEEEECSCCCTTCEE-EEEEEEEE---EETTEEEEEEEEEETTEEEEEEE- T ss_pred HHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEECCCCCCEEE-EEEEEEEE---EECCEEEEEEEEEECCEEEEEEE- T ss_conf 99999999743244444777727998514016882430354699-99999998---01899999999999999999999- Q ss_pred EEEEE Q ss_conf 06998 Q gi|254780460|r 161 LRVCL 165 (172) Q Consensus 161 l~vgl 165 (172) +.+.+ T Consensus 139 l~~~~ 143 (146) T 3d6x_A 139 LKAXI 143 (146) T ss_dssp EEEEE T ss_pred EEEEE T ss_conf 99999 No 8 >>3esi_A Uncharacterized protein; protein from erwinia carotovora subsp. atroseptica (pectobacterium atrosepticum), structural genomics; 2.50A {Pectobacterium atrosepticum} (A:) Probab=99.96 E-value=1.8e-29 Score=195.09 Aligned_cols=125 Identities=20% Similarity=0.371 Sum_probs=108.9 Q ss_pred CCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC Q ss_conf 64122568999971844134235788750786553004556899521127578887998864012334688266763045 Q gi|254780460|r 32 PPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSN 111 (172) Q Consensus 32 ~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~ 111 (172) |||+|||||+++++++ .++++|+|++|+|||+||||++||||||+++|+++|+++.++. ..+.+.++++ T Consensus 3 P~~l~iD~v~~~~~~~------~~~~~~~v~~d~~~f~gHfp~~PvlPGvl~lE~~~Q~~~~~~~-----~~~~~~~~~~ 71 (129) T 3esi_A 3 PVELVRHDVKKTDETS------QVELMLQVDPDLFWFNGHFTGQPLLPGVAQLDWVMHYATTVLA-----QGWTFLSIEN 71 (129) T ss_dssp CEEEEECCCCCCSSEE------EEEEEEECCTTSGGGCTTTBSSCCCCHHHHHHHHHHHHHHHTC-----TTEEEEEEEE T ss_pred CHHHHHCEEEECCCCC------EEEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHH-----CCHHHHHHCC T ss_conf 4333124134327775------7999998089885268748899818489999999999998743-----2221210100 Q ss_pred CEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEECCCCC Q ss_conf 114102337985799999988963078579999999999999999997106998617688 Q gi|254780460|r 112 IKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTIDRGV 171 (172) Q Consensus 112 vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~de~~ 171 (172) +||+++|.||++ +++++++ ...+...+++++++++||++++++.++.+++++++.. T Consensus 72 ~kf~~~v~Pgd~-l~~~~~~---~~~~~~~~~~~~~~~~~g~~v~~~~~l~~~~~~~~~~ 127 (129) T 3esi_A 72 IKFQQPILPGKT-LRLVLIW---HAGKQSLTFSYSILEGDTERTASSGKIKLTPIMEDNP 127 (129) T ss_dssp EEECSCCCTTCE-EEEEEEE---ETTTTEEEEEEEEEETTEEEEEEEEEEEEEETTC--- T ss_pred EEECCCCCCCCE-EEEEEEE---EECCCEEEEEEEEEEEECCEEEEEEEEEECCCCCCCC T ss_conf 378265289999-9999999---9636708999999993099999999999344278889 No 9 >>2prx_A Thioesterase superfamily protein; ZP_00837258.1, structural genomics, joint center for structural genomics, JCSG; 1.50A {Shewanella loihica pv-4} (A:) Probab=99.07 E-value=1.1e-09 Score=77.48 Aligned_cols=126 Identities=10% Similarity=-0.086 Sum_probs=92.7 Q ss_pred CCC-CCCCEEE--------EEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCC Q ss_conf 899-8641225--------6899997184413423578875078655300455689952112757888799886401233 Q gi|254780460|r 28 QLP-KPPMLMF--------HRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWL 98 (172) Q Consensus 28 rLP-~~p~lmi--------DrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~ 98 (172) +|| +.|++++ ++++++.+++ ++++...|.+ ++..+|++-.+.++.+++.|++.|++.+++... T Consensus 10 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~v~~--~~~~~~g~v~gg~~~~~~d~a~~~~~~~~~~~~ 81 (160) T 2prx_A 10 AYPDDLSHCYGCGRNNEQGHQLKSYWRGE------QTIAHFXPKP--FHTAIPGFVYGGLIASLIDCHGTGSASAAAQRA 81 (160) T ss_dssp TC----CCSCC----------CCCEEETT------EEEEEECCCT--TCBSSTTBBCHHHHHHHHHHHHHHHHHHHHC-- T ss_pred HCCCCCCCEEEECCCCCCCCEEEEEECCC------EEEEEEEECH--HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 67988997889289999857668996299------9999999698--996999964575899999999999999863010 Q ss_pred C-------CCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEE Q ss_conf 4-------688266763045114102337985799999988963078579999999999999999997106998 Q gi|254780460|r 99 G-------ELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCL 165 (172) Q Consensus 99 ~-------~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl 165 (172) . ......+....+++|++++.+||.+ +++.++.+ .++...+++++++++|+++++++-..+.+ T Consensus 82 ~~~~~~~~~~~~~~~~~~~~i~f~~pv~~Gd~l-~~~~~v~~---~g~~~~~~~~~v~~~~~~va~a~~t~v~~ 151 (160) T 2prx_A 82 LEQAGEQLDEPPRFVTAALNIDYLAPTPXGVEL-ELVGEIKE---VKPRKVVVEIALSADGKLCARGHXVAVKX 151 (160) T ss_dssp -----------CCEEEEEEEEEECSCCBTTSCE-EEEEEEEE---C--CEEEEEEEEEC---CCEEEEEEEEEC T ss_pred CCCCCCCCCCCCCEEEEEEEEEEEECCCCCCEE-EEEEEEEE---ECCCEEEEEEEEEECCEEEEEEEEEEEEC T ss_conf 244334456777259999899990055899869-99999999---57979999999999999999989999995 No 10 >>2bi0_A Hypothetical protein RV0216; conserved hypothetical, hotdog-fold, structural proteomics in europe, spine, structural genomics; 1.9A {Mycobacterium tuberculosis} (A:176-337) Probab=98.99 E-value=1.4e-08 Score=70.94 Aligned_cols=142 Identities=5% Similarity=-0.099 Sum_probs=101.9 Q ss_pred CCCCCCHHHHHHHCCCCCCCCCCCCCC-CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHH Q ss_conf 865589889998418835579988899-8641225689999718441342357887507865530045568995211275 Q gi|254780460|r 4 RKSSYTYEEILRCGEGEMFGEGNAQLP-KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCL 82 (172) Q Consensus 4 ~~~~f~~~~i~~~~~g~~fg~~~~rLP-~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL 82 (172) .-.+++.+++... +| +-|..+++..+...+.-..... .+.+.-.-+.|.+++..||.+.|++||++ T Consensus 11 ~~~~~~~~~~~~~------------~p~r~~~~~~~G~~~~~~~~t~~~~-~~~~~~sgD~npiH~d~~~~~~~i~~G~l 77 (162) T 2bi0_A 11 PTAHWDGAVFRKR------------VPGPHFDAGIAGAVLHSTADLVSGA-PELARLTLNIAATHHDWRVSGRRLVYGGH 77 (162) T ss_dssp TTTTCCHHHHHHH------------SCSCCCCGGGTTCEEECCCEECCCH-HHHHHHTTCCCGGGTCTTTTSSCCCCHHH T ss_pred CCCCCCHHHCCCC------------CCCCCCCCCCCEEEEECCCCEEECH-HHHHHHHCCCCHHHCCCCHHCCCCCCCCC T ss_conf 5344552230245------------8876455214518974487555230-78998747755112570220362201320 Q ss_pred HHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEEC-CCCEEEEEEEEEEE-------CCEE Q ss_conf 788879988640123346882667630451141023379857999999889630-78579999999999-------9999 Q gi|254780460|r 83 GLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILR-GRVVLGAADGWVKV-------NGKE 154 (172) Q Consensus 83 ~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~-~~~~~~~~~g~~~v-------dg~~ 154 (172) .+..+.++..-. ......+.+..+++|+++|.||| +++++.+|.++.. .++..+...+.+.+ +|++ T Consensus 78 ~~~~~~~~~~~~-----~~~~~~~~~~~~~rF~~PV~~GD-tl~~~~~v~~~~~~~~~~~~~~~~~v~~~~~~~~q~G~~ 151 (162) T 2bi0_A 78 TIGLALAQATRL-----LPNLATVLDWESCDHTAPVHEGD-TLYSELHIESAQAHADGGVLGLRSLVYAVSDSASEPDRQ 151 (162) T ss_dssp HHHHHHHHHHHH-----STTCCEEEEEEEEEECSCCCTTC-EEEEEEEEEEEEECSSSEEEEEEEEEEECCSSTTSCCEE T ss_pred HHHHHHHHHHCC-----CCCHHHHHEECCCEECCCCCCCC-EEEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCE T ss_conf 999999874234-----34134552012537348867899-999999999832559998799999999757877789986 Q ss_pred EEEEEEEEEEE Q ss_conf 99997106998 Q gi|254780460|r 155 IYQANDLRVCL 165 (172) Q Consensus 155 i~~a~~l~vgl 165 (172) +++++- .+.+ T Consensus 152 V~~~~~-~~~v 161 (162) T 2bi0_A 152 VLDWRF-SALQ 161 (162) T ss_dssp EEEEEE-EEEE T ss_pred EEEEEE-EEEE T ss_conf 999897-7563 No 11 >>2qwz_A Phenylacetic acid degradation-related protein; YP_613385.1, putative thioesterase, structural genomics, joint center for structural genomics; HET: MSE; 2.15A {Silicibacter SP} (A:) Probab=98.68 E-value=3.4e-07 Score=62.65 Aligned_cols=133 Identities=7% Similarity=-0.010 Sum_probs=93.9 Q ss_pred CCCCCCCCHHHHHHHCCCCCCCCCCCCCC-CCCCEEEE-EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEE Q ss_conf 88865589889998418835579988899-86412256-89999718441342357887507865530045568995211 Q gi|254780460|r 2 KNRKSSYTYEEILRCGEGEMFGEGNAQLP-KPPMLMFH-RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMP 79 (172) Q Consensus 2 ~~~~~~f~~~~i~~~~~g~~fg~~~~rLP-~~p~lmiD-rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmP 79 (172) -..+..++.+++.++ +| ++++.+++ ++++++++ .++....+.++ |+.....+. T Consensus 18 ~~~~~~~~~~~l~~~------------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~------~~n~~g~vh 72 (159) T 2qwz_A 18 QGXELVFDKDGLSAY------------LEEVFPQIQGEFSIDALAKG-------EITXRLNVQER------HLRPGGTVS 72 (159) T ss_dssp SCCCCSSCHHHHHHH------------HHHHCGGGTTTEEEEEECSS-------EEEEEECGGGG------CCCTTCCCC T ss_pred HHHHHHCCHHHHHHH------------HHHHCCCCCCCEEEEEEECC-------EEEEEEECCHH------HCCCCCCCC T ss_conf 655433599999999------------87558201498799999499-------99999997989------939998393 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEEC--CEEEEE Q ss_conf 275788879988640123346882667630451141023379857999999889630785799999999999--999999 Q gi|254780460|r 80 GCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVN--GKEIYQ 157 (172) Q Consensus 80 GvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vd--g~~i~~ 157 (172) |..+...+-.++++.+...............+++|+++|.+||. ++.+.++.+ .++..++++++++++ |+++++ T Consensus 73 GG~l~~~~d~~~~~~~~~~~~~~~~~~t~~~~i~f~~pv~~gd~-i~~~a~v~~---~g~~~~~~~~~~~~~~~g~~va~ 148 (159) T 2qwz_A 73 GPSXFALADVSVYALVLAHLGREALAVTTNASLDFXRKPESGRD-LLGQARLLK---LGRTLAVGDILLFSEGXEAPVAR 148 (159) T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCCCEEEEEEEEECSCCCTTSC-EEEEEEEEE---ECSSEEEEEEEEEETTCSSCSEE T ss_pred HHHHHHHHHHCCHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCC-EEEEEEEEE---ECCEEEEEEEEEEECCCCEEEEE T ss_conf 79988876712466776640478403677634466046556754-799989999---28869999999999999969999 Q ss_pred EEEEEE Q ss_conf 971069 Q gi|254780460|r 158 ANDLRV 163 (172) Q Consensus 158 a~~l~v 163 (172) ++-..+ T Consensus 149 ~~~t~~ 154 (159) T 2qwz_A 149 STXTYS 154 (159) T ss_dssp EEEEEE T ss_pred EEEEEE T ss_conf 999997 No 12 >>1q6w_A Monoamine oxidase regulatory protein, putative; structural genomics, nysgxrc T805, hot DOG fold; 2.81A {Archaeoglobus fulgidus dsm 4304} (A:) Probab=98.63 E-value=3.7e-07 Score=62.44 Aligned_cols=139 Identities=10% Similarity=0.013 Sum_probs=94.6 Q ss_pred CC-CCCCEEEEEEEEEECCCCC--CCCE----EEEEEEE---CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCC Q ss_conf 99-8641225689999718441--3423----5788750---78655300455689952112757888799886401233 Q gi|254780460|r 29 LP-KPPMLMFHRITQISETGGN--YNQG----VVRAEMD---ITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWL 98 (172) Q Consensus 29 LP-~~p~lmiDrV~~i~~~~g~--~g~G----~i~aek~---i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~ 98 (172) +| ++|+++.|....-....+. ...+ |..+.-| ++-|++|.+.+..+.|++||.+....+.|+...++... T Consensus 7 ~~~~~~~~~~d~~vG~~~~~~~~~vt~~~i~~fa~~~gd~~pih~d~~~A~~~g~~~~ia~g~~~~~~~~~~~~~~~~~~ 86 (161) T 1q6w_A 7 IMARNPIYFESIQIGEKIEGLPRTVTETDIWTFAYLTADFFPLHTDVEFAKKTIFGKPIAQGXLVLSIALGXVDQVILSN 86 (161) T ss_dssp --CCSBCCGGGCCTTCEEECCCEECCHHHHHHHHHHHTCCCHHHHCHHHHHTSTTSSCBCCHHHHHHHHHHHHHHHHHTT T ss_pred CCCCCCCCEEEECCCCEEEECCEEECHHHHHHHHHHHCCCCCCEECHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHCC T ss_conf 14799951030064689966697879999999999768997518389898425899942472889999999999886301 Q ss_pred CC-CCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEE--ECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEEECCC Q ss_conf 46-8826676304511410233798579999998896--3078579999999999-9999999971069986176 Q gi|254780460|r 99 GE-LGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKI--LRGRVVLGAADGWVKV-NGKEIYQANDLRVCLTIDR 169 (172) Q Consensus 99 ~~-~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v--~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl~~de 169 (172) .. ...+.+.+..+++|+++|.|||. ++.+.+|..+ .+.+..++.++.++.. ||++|++++. .+.+-+.+ T Consensus 87 ~~~~~~~~~~g~~~~~f~~pv~~GD~-l~~~~~v~~~~~~~~~~~~v~~~~~~~n~~g~~v~~~~~-~~~~~~~~ 159 (161) T 1q6w_A 87 YDVSSVIAFFGIKDVRFLRPVFIGDT-IAASAEVVEKQDFDEKSGVVTYKLEVKNQRGELVLTALY-SALIRKTP 159 (161) T ss_dssp SBGGGEEEEEEEEEEEECSCCBTTCE-EEEEEEEEEEEEEETTEEEEEEEEEEECTTSCEEEEEEE-EEEEECCC T ss_pred CCCCCEEEEEEEEEEEECCCCCCCCE-EEEEEEEEEEEECCCCCEEEEEEEEEEECCCCEEEEEEE-EEEEECCC T ss_conf 56777068876657698788899999-999999999998279858999999999699999999799-99997799 No 13 >>1ixl_A Hypothetical protein PH1136; alpha+beta, hot-DOG-fold, structural genomics, unknown function; 1.94A {Pyrococcus horikoshii} (A:) Probab=98.46 E-value=4e-06 Score=56.29 Aligned_cols=121 Identities=7% Similarity=-0.031 Sum_probs=86.9 Q ss_pred CCCC-CCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEE Q ss_conf 8998-641225689999718441342357887507865530045568995211275788879988640123346882667 Q gi|254780460|r 28 QLPK-PPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRA 106 (172) Q Consensus 28 rLP~-~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~ 106 (172) .+|+ -|.++.+++++++++. +.... .+.+..|+...++++|..+.+.+.|++..... ..... T Consensus 7 ~~~~~~~~~l~~~~~~~~~~~-------~~~~~-----~~~~~~~~~~~g~lhGG~l~~~~d~~~~~~~~-----~~~~~ 69 (131) T 1ixl_A 7 RTHKLTSRILVGKPILIKEGY-------AEVEL-----ETIDEXKVDEKGLVHGGFTFGLADYAAXLAVN-----EPTVV 69 (131) T ss_dssp CSCTTCCTTTTCEEEEEETTE-------EEEEE-----ECCGGGBSSTTCBBCHHHHHHHHHHHHHHHHC-----CTTEE T ss_pred HHCCCHHHHCCEEEEEEECCE-------EEEEE-----EECHHHCCCCCCCCCHHHHHHHHHHHHHHHCC-----CCEEE T ss_conf 425101242311999997999-------99999-----98789904999968399999998744455326-----75499 Q ss_pred EEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEECCCC Q ss_conf 6304511410233798579999998896307857999999999999999999710699861768 Q gi|254780460|r 107 VSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTIDRG 170 (172) Q Consensus 107 ~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~de~ 170 (172) ....+++|++++.+|+. ++.+.++.+. ++.....+++++.||+++++++-..+ ...+++ T Consensus 70 t~~~~i~f~~pv~~g~~-l~~~a~v~~~---g~~~~~~~~~i~~~g~lva~a~~~~~-~~~~~~ 128 (131) T 1ixl_A 70 LGKAEVRFTKPVKVGDK-LVAKAKIIED---LGKKKIVEVKVYREEEVVLEGKFYCY-VLEKHV 128 (131) T ss_dssp EEEEEEEECSCCBTTCE-EEEEEEEEEE---ETTEEEEEEEEEETTEEEEEEEEEEE-ECSSCT T ss_pred EEEEEEEEEEECCCCCE-EEEEEEEEEE---CCCEEEEEEEEEECCEEEEEEEEEEE-EECHHH T ss_conf 99999999872568988-9999999995---99499999999999999999999999-988304 No 14 >>3f1t_A Uncharacterized protein Q9I3C8_pseae; PAR319A, NESG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.20A {Pseudomonas aeruginosa} (A:) Probab=98.34 E-value=1.7e-06 Score=58.60 Aligned_cols=130 Identities=8% Similarity=-0.042 Sum_probs=89.8 Q ss_pred CHHHHHHHCCCCCCCCCCCCCC-CCCC--EEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHH Q ss_conf 9889998418835579988899-8641--225689999718441342357887507865530045568995211275788 Q gi|254780460|r 9 TYEEILRCGEGEMFGEGNAQLP-KPPM--LMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLD 85 (172) Q Consensus 9 ~~~~i~~~~~g~~fg~~~~rLP-~~p~--lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iE 85 (172) |+||+.+.. .+++ .+|| +|-++|.+++++ +++....++++ +.+|++...+..|+|... T Consensus 2 t~~~~~~~~---------~~~~~~~p~~~~~g~~i~~~~~~-------~~~~~~~~~~~---~~n~~~~g~v~GG~l~~l 62 (148) T 3f1t_A 2 SENPLLERA---------RRFLSALRHCQVLGLTVEAADEK-------GLTLRLPYSQA---IIGNPESGVVHGGAITTL 62 (148) T ss_dssp --CHHHHHH---------HHHHTTCSHHHHHTCEEEEECSS-------CEEEEECGGGG---BCSCSSSCCBCHHHHHHH T ss_pred CCCHHHHHH---------HHHHHCCCHHHHCCCEEEEEECC-------EEEEEEECCHH---HCCCCCCCEECHHHHHHH T ss_conf 987699999---------99886295888769899999499-------89999992789---938999977717897888 Q ss_pred HHHHHHHHHCCCCCCCCCEEEEEE-CCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEEC--CEEEEEEEEEE Q ss_conf 879988640123346882667630-451141023379857999999889630785799999999999--99999997106 Q gi|254780460|r 86 ALWQLTGFFLGWLGELGKGRAVSV-SNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVN--GKEIYQANDLR 162 (172) Q Consensus 86 a~~Ql~~~~~~~~~~~~~~~~~~~-~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vd--g~~i~~a~~l~ 162 (172) +..+++.......+. ......+ .+++|++++.+|+. ++.+.++.+ .++...+.+++++.| |+++++++-.. T Consensus 63 ~D~~~~~~~~~~~~~--~~~~~t~~l~i~f~~p~~~g~~-i~~~a~i~~---~~~~~~~~~~~v~~~~~g~~va~~~~t~ 136 (148) T 3f1t_A 63 XDTTCGISTVCVLPD--FEICPTLDLRIDYXHPAEPHKD-VYGFAECYR---VTPNVIFTRGFAYQDDPGQPIAHVVGAF 136 (148) T ss_dssp HHHHHHHHGGGTCSS--CCCCCEEEEEEEECSCCCTTSC-EEEEEEEEE---ECSSEEEEEEEEESSCTTSCSEEEEEEE T ss_pred HHHHHHHHHHHHCCC--CCEEEEEEEEEEEEECCCCCCE-EEEEEEEEE---ECCCEEEEEEEEEECCCCCEEEEEEEEE T ss_conf 888878888743578--8447997788999970589975-999999999---4896999999999999994999999999 Q ss_pred E Q ss_conf 9 Q gi|254780460|r 163 V 163 (172) Q Consensus 163 v 163 (172) + T Consensus 137 ~ 137 (148) T 3f1t_A 137 X 137 (148) T ss_dssp E T ss_pred E T ss_conf 9 No 15 >>3ir3_A HTD2, 3-hydroxyacyl-thioester dehydratase 2; structural genomics, structural genomics consortium, SGC, lyase; 1.99A {Homo sapiens} (A:) Probab=98.34 E-value=4.2e-06 Score=56.16 Aligned_cols=103 Identities=17% Similarity=0.088 Sum_probs=76.5 Q ss_pred EECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCC Q ss_conf 50786553004556899521127578887998864012334688266763045114102337985799999988963078 Q gi|254780460|r 59 MDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGR 138 (172) Q Consensus 59 k~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~ 138 (172) ..++-|+.|.+.++.++|+.||.+....+.+++.-.+ .......+..+++|+++|.||| +++.+.++.++... T Consensus 44 ~pih~D~~~A~~~g~~~~ia~g~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~f~~Pv~~Gd-tl~~~~~v~~~~~~- 116 (148) T 3ir3_A 44 NPLHLNEDFAKHTKFGNTIVHGVLINGLISALLGTKM-----PGPGCVFLSQEISFPAPLYIGE-VVLASAEVKKLKRF- 116 (148) T ss_dssp SCGGGSSCC--------CBCCHHHHHHHHHHHHHHTS-----SCTTCEEEEEEEECCSCCBTTC-EEEEEEEEEEEETT- T ss_pred CCCCCCHHHHHHCCCCCEEECCEEEEEEEHHHHCCCC-----CCHHHHHHHHHEEECCCCCCCC-EEEEEEEEEEEECC- T ss_conf 8330588798145789715025000100012101356-----7315413112006458999998-99999999999579- Q ss_pred CEEEEEEEEEEECCEEEEEEEEEEEEEECCC Q ss_conf 5799999999999999999971069986176 Q gi|254780460|r 139 VVLGAADGWVKVNGKEIYQANDLRVCLTIDR 169 (172) Q Consensus 139 ~~~~~~~g~~~vdg~~i~~a~~l~vgl~~de 169 (172) ...+..+..+..+|+++++++- .+.+.+.+ T Consensus 117 ~~~~~~~~~~~~~g~~v~~~~~-~~~~~~~~ 146 (148) T 3ir3_A 117 IAIIAVSCSVIESKKTVMEGWV-KVMVPEAS 146 (148) T ss_dssp EEEEEEEEEETTTCCEEEEEEE-EEECCCCC T ss_pred CCEEEEEEEEEECCEEEEEEEE-EEEECCCC T ss_conf 8899999999979999999999-99944888 No 16 >>2f3x_A Transcription factor FAPR; 'HOT-DOG' fold / malonyl-COA complex, gene regulation; HET: MLC; 3.10A {Bacillus subtilis} (A:40-157) Probab=98.29 E-value=9.3e-05 Score=48.18 Aligned_cols=108 Identities=11% Similarity=0.067 Sum_probs=79.0 Q ss_pred EEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEE Q ss_conf 22568999971844134235788750786553004556899521127578887998864012334688266763045114 Q gi|254780460|r 35 LMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKF 114 (172) Q Consensus 35 lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkf 114 (172) .|.+++.++++++ +++....+.++++++. ..++.|.++...+-+++++.+. .........+++| T Consensus 3 ~lg~~~~~~~~~~------~~~~~~~~~~~~~~~~-----~g~~hGG~~~~l~d~~~~~~~~-----~~~~~t~~l~~~f 66 (118) T 2f3x_A 3 EVIGEIIDLELDD------QAISILEIKQEHVFSR-----NQIARGHHLFAQANSLAVAVID-----DELALTASADIRF 66 (118) T ss_dssp GSSSEEEEEETTT------EEEEEEECCGGGBCTT-----TCBBCHHHHHHHHHHHHHHTSC-----SSCCEEEEEEEEE T ss_pred HHHEEEEEEECCC------EEEEEEECCHHHHCCC-----CCEEEHHHHHHHHHHHHHHHCC-----CCCEEEEEEEEEE T ss_conf 6311269997894------1799951437883699-----8588888999999999999719-----9848999999899 Q ss_pred EEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEE--ECCEEEEEEEEEE Q ss_conf 10233798579999998896307857999999999--9999999997106 Q gi|254780460|r 115 RGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVK--VNGKEIYQANDLR 162 (172) Q Consensus 115 r~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~--vdg~~i~~a~~l~ 162 (172) ++++.|||. +..+.++.+..++ ..+.+++++ .+++++++++-.. T Consensus 67 ~~pv~~Gd~-i~~~a~v~~~g~~---~~~~~~~v~~~~~~~~va~a~~~~ 112 (118) T 2f3x_A 67 TRQVKQGER-VVAKAKVTAVEKE---KGRTVVEVNSYVGEEIVFSGRFDM 112 (118) T ss_dssp CSCCBTTCE-EEEEEEEEEEETG---GGEEEEEEEEEETTEEEEEEEEEE T ss_pred EECCCCCCE-EEEEEEEEEECCC---EEEEEEEEEEEECCEEEEEEEEEE T ss_conf 562666747-9999999998792---899999999843999999989999 No 17 >>2h4u_A Thioesterase superfamily member 2; structural genomics, structural genomics consortium, SGC, hydrolase; 2.20A {Homo sapiens} (A:) Probab=98.19 E-value=0.00011 Score=47.68 Aligned_cols=118 Identities=15% Similarity=0.046 Sum_probs=82.0 Q ss_pred CCC-CCCC---EEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCC Q ss_conf 899-8641---225689999718441342357887507865530045568995211275788879988640123346882 Q gi|254780460|r 28 QLP-KPPM---LMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGK 103 (172) Q Consensus 28 rLP-~~p~---lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~ 103 (172) +++ .+|+ ++-.++++++++ .+.....+. ..|.....++.|..+.+.+-+++++++. ...... T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~v~------~~~~n~~g~vhgG~~~~~~d~~~~~~~~-~~~~~~ 84 (145) T 2h4u_A 19 YFQSMRNFERVLGKITLVSAAPG-------KVICEMKVE------EEHTNAIGTLHGGLTATLVDNISTMALL-CTERGA 84 (145) T ss_dssp -----CCGGGGGTTCEEEEEETT-------EEEEEEECC------GGGBCTTSBBCHHHHHHHHHHHHHHHHH-TSSSCC T ss_pred HHHHCCCHHHHCCCEEEEEECCC-------EEEEEEECC------HHHCCCCCCEEHHHHHHHHHHHHHHHHH-HHCCCC T ss_conf 44412566776085699998199-------899999869------9993999969189999988887899998-637886 Q ss_pred EEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE--CCEEEEEEEEEEE Q ss_conf 66763045114102337985799999988963078579999999999--9999999971069 Q gi|254780460|r 104 GRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV--NGKEIYQANDLRV 163 (172) Q Consensus 104 ~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v--dg~~i~~a~~l~v 163 (172) .......+++|++++.+|+. ++.+.++.+ .++..++.+++++. +|+++++++-..+ T Consensus 85 ~~~t~~~~i~f~~pv~~g~~-v~~~~~v~~---~g~~~~~~~~~v~~~~~g~lva~~~~t~~ 142 (145) T 2h4u_A 85 PGVSVDMNITYMSPAKLGED-IVITAHVLK---QGKTLAFTSVDLTNKATGKLIAQGRHTKH 142 (145) T ss_dssp CCEEEEEEEEECSCCBTTCE-EEEEEEEEE---ECSSEEEEEEEEEETTTCCEEEEEEEEEE T ss_pred CEEEEEEHHCCCCCCCCCCE-EEEEEEEEE---CCCCEEEEEEEEEECCCCEEEEEEEEEEE T ss_conf 10222110000257789987-988899999---38989999999999999989999989997 No 18 >>1iq6_A (R)-hydratase, (R)-specific enoyl-COA hydratase; polyhydroxyalkanoate, aeromonas caviae, the hydratase 2 motif, lyase; 1.50A {Aeromonas punctata} (A:) Probab=98.15 E-value=1.4e-05 Score=53.01 Aligned_cols=94 Identities=14% Similarity=0.093 Sum_probs=70.7 Q ss_pred ECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCC Q ss_conf 07865530045568995211275788879988640123346882667630451141023379857999999889630785 Q gi|254780460|r 60 DITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRV 139 (172) Q Consensus 60 ~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~ 139 (172) .++-|+.|.+.++.++|++||.+..--+.+++.-. ........+..+++|+++|.||| +++.+.+++++...+. T Consensus 35 pih~D~~~a~~~g~~~~i~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~f~~pv~~GD-~i~~~~~v~~~~~~~g 108 (134) T 1iq6_A 35 PLHLDPAFAATTAFERPIVHGMLLASLFSGLLGQQ-----LPGKGSIYLGQSLSFKLPVFVGD-EVTAEVEVTALREDKP 108 (134) T ss_dssp HHHHCHHHHTTSTTCSCBCCHHHHHHHHHHHHHHT-----SSCTTCEEEEEEEEECSCCBTTC-EEEEEEEEEEECSSSS T ss_pred CCEECHHHHHHCCCCCCEECCHHHHHHHHHHHHCC-----CCCCEEEEEEEEEEECCCCCCCC-EEEEEEEEEEEECCCC T ss_conf 53237999965699984650166888986542311-----68850787453208867856899-9999999999995899 Q ss_pred EEEEEEEEEEE-CCEEEEEEEE Q ss_conf 79999999999-9999999971 Q gi|254780460|r 140 VLGAADGWVKV-NGKEIYQAND 160 (172) Q Consensus 140 ~~~~~~g~~~v-dg~~i~~a~~ 160 (172) .+.++..+.. +|+++++++- T Consensus 109 -~v~~~~~~~nq~g~~v~~g~~ 129 (134) T 1iq6_A 109 -IATLTTRIFTQGGALAVTGEA 129 (134) T ss_dssp -EEEEEEEEECTTSCEEEEEEE T ss_pred -EEEEEEEEEECCCCEEEEEEE T ss_conf -999999999899989999999 No 19 >>2f41_A Transcription factor FAPR; 'HOT-DOG' fold, gene regulation; 2.50A {Bacillus subtilis} (A:) Probab=98.12 E-value=9e-05 Score=48.26 Aligned_cols=108 Identities=9% Similarity=0.039 Sum_probs=71.2 Q ss_pred EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEE Q ss_conf 25689999718441342357887507865530045568995211275788879988640123346882667630451141 Q gi|254780460|r 36 MFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFR 115 (172) Q Consensus 36 miDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr 115 (172) +++++.++.++.. .+....+.+++..| ..++++|.++...+.+.++.++.. ........+++|+ T Consensus 7 l~~~~~~~~~d~~------~i~~~~~~~~~~~~-----~~~i~hGg~~~~~~d~~~~~~~~~-----~~~~~~~~~i~f~ 70 (121) T 2f41_A 7 VIGEIIDLELDDQ------AISILEIKQEHVFS-----RNQIARGHHLFAQANSLAVAVIDD-----ELALTASADIRFT 70 (121) T ss_dssp CSSEEEEEETTTE------EEEEEECCGGGBCS-----TTCBBCHHHHHHHHHHHHHHTC--------CCCEEEEEEEEC T ss_pred HCCEEEEEECCCC------EEEEEEECCCEECC-----CCCCCCCCHHHHHHHHHHHHHCCC-----CCEEEEEEEEEEE T ss_conf 3371799948950------89999731200038-----888746243999999999987399-----6236034331757 Q ss_pred EEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEE Q ss_conf 0233798579999998896307857999999999999999999710 Q gi|254780460|r 116 GMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDL 161 (172) Q Consensus 116 ~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l 161 (172) ++|.|||. ++.+.++.+...+.. .+.+......+|+++++++-- T Consensus 71 ~pv~~Gd~-i~~~a~v~~~~~~~~-~~~~~i~~~~~~~~v~~~~~~ 114 (121) T 2f41_A 71 RQVKQGER-VVAKAKVTAVEKEKG-RTVVEVNSYVGEEIVFSGRFD 114 (121) T ss_dssp SCCBTTCE-EEEEEEEEEECSSSS-CEEEEEEEEETTEEEEEEEEE T ss_pred ECCCCCCE-EEEEEEEEEEECEEE-EEEEEEEEEECCEEEEEEEEE T ss_conf 52352638-999999999823057-999999997899999999999 No 20 >>2b3n_A Hypothetical protein AF1124; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.25A {Archaeoglobus fulgidus} (A:) Probab=98.00 E-value=6.1e-05 Score=49.29 Aligned_cols=90 Identities=10% Similarity=-0.070 Sum_probs=66.9 Q ss_pred CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCE Q ss_conf 78655300455689952112757888799886401233468826676304511410233798579999998896307857 Q gi|254780460|r 61 ITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVV 140 (172) Q Consensus 61 i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~ 140 (172) ++-|+=|.+.+-.++|++||.+..-.+++++. ........+..+++|+++|.||| +++++.++++. +.. T Consensus 66 iH~D~~~A~~~g~~~~i~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~rf~~Pv~~Gd-tl~~~~~v~~~---~~~ 134 (159) T 2b3n_A 66 VHFDEDFASKTRFGGRVVHGMLTTSLVSAAVA-------RLPGTVVLLEQSFRYTSPVRIGD-VVRVEGVVSGV---EKN 134 (159) T ss_dssp HHHCHHHHHHSTTSSCCCCHHHHHHHHHHHHH-------TSSSCEEEEEEEEEECSCCCTTC-EEEEEEEEEEE---ETT T ss_pred CEECHHHHHHCCCCCEEECHHHHHHHHHHHHH-------HCCHHHHHHHHHEEEECCCCCCC-EEEEEEEEEEE---ECC T ss_conf 51537778546788613014778999999986-------14314534413106643548999-99999999999---799 Q ss_pred EEEEEEEEEECCEEEEEEEEE Q ss_conf 999999999999999999710 Q gi|254780460|r 141 LGAADGWVKVNGKEIYQANDL 161 (172) Q Consensus 141 ~~~~~g~~~vdg~~i~~a~~l 161 (172) ...++..+.++|+++++++-. T Consensus 135 ~~~~~~~~~~~g~~v~~~~~~ 155 (159) T 2b3n_A 135 RYTIDVKCYTGDKVVAEGVVK 155 (159) T ss_dssp EEEEEEEEEETTEEEEEEEEE T ss_pred EEEEEEEEEECCEEEEEEEEE T ss_conf 899999999999999999999 No 21 >>2cwz_A Thioesterase family protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.85A {Thermus thermophilus HB8} (A:) Probab=97.63 E-value=0.0018 Score=40.55 Aligned_cols=108 Identities=16% Similarity=-0.056 Sum_probs=76.0 Q ss_pred EEEEEEECCCCC-CCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEE Q ss_conf 578875078655-3004556899521127578887998864012334688266763045114102337985799999988 Q gi|254780460|r 54 VVRAEMDITPNL-WFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFK 132 (172) Q Consensus 54 ~i~aek~i~~d~-wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik 132 (172) .+..++.|+++. .-|..+.-.+|+.-|-..+-.+-.++++.+...-....+....-.+++|+++|.||+ +++.+.++. T Consensus 9 ~~~~~~~vt~~~~~~fa~t~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~Pv~~G~-~l~~~~~v~ 87 (141) T 2cwz_A 9 EAVFETVVTPEXTVRFEELGPVHPVYATYWXVKHXELAGRKIILPFLEEGEEGIGSYVEARHLASALPGX-RVRVVARHE 87 (141) T ss_dssp EEEEEEECCGGGEEEETTTEEEEEEECHHHHHHHHHHHHHHHHTTTCCTTEEEEEEEEEEEECSCCCTTC-EEEEEEEEE T ss_pred EEEEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCC-EEEEEEEEE T ss_conf 7999999899999998736886731157899999999999998854899983899999999934677998-899999999 Q ss_pred EEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEE Q ss_conf 963078579999999999-999999997106998 Q gi|254780460|r 133 KILRGRVVLGAADGWVKV-NGKEIYQANDLRVCL 165 (172) Q Consensus 133 ~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl 165 (172) ++ ++..+.++++++. +|++|++++--.+-+ T Consensus 88 ~~---~~~~~~~~~~~~n~~g~~v~~g~~~~~~~ 118 (141) T 2cwz_A 88 KT---EGNRVYARVEAYNELGDLIGVGRTEQVIL 118 (141) T ss_dssp EE---ETTEEEEEEEEEETTCCEEEEEEEEEEEE T ss_pred EE---CCCEEEEEEEEEECCCCEEEEEEEEEEEE T ss_conf 97---69799999999969999999999999995 No 22 >>2hbo_A Hypothetical protein (NP_422103.1); structural genomics, PSI- 2, protein structure initiative, joint center for structural genomics, JCSG; HET: MSE PE4; 1.85A {Caulobacter vibrioides} (A:) Probab=97.48 E-value=0.004 Score=38.48 Aligned_cols=104 Identities=10% Similarity=-0.047 Sum_probs=72.6 Q ss_pred EEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEE Q ss_conf 57887507865530045568995211275788879988640123346882667630451141023379857999999889 Q gi|254780460|r 54 VVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKK 133 (172) Q Consensus 54 ~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~ 133 (172) .++.+..+.+ .|.....++.|..+..-+-++++..+....+ ......--+++|++++.+||. ++.+..+.+ T Consensus 43 ~~~~~~~v~~------~~~~~~G~v~gg~~~~~~d~a~~~~~~~~~~--~~~vt~~~~~~f~~pv~~gd~-l~~~~~v~~ 113 (158) T 2hbo_A 43 QARLAFRVEE------HHTNGLGNCHGGXLXSFADXAWGRIISLQKS--YSWVTVRLXCDFLSGAKLGDW-VEGEGELIS 113 (158) T ss_dssp TTCEEEECCG------GGBCSSSBBCHHHHHHHHHHHHHHHHHHHHC--EEEEEEEEEEEECSCCBTTCE-EEEEEEEEE T ss_pred EEEEEEEECH------HHCCCCCEECCCHHHHHHHHHHHHHHHCCCC--CCEEEEEEEEEECCCCCCCCE-EEEEEEEEE T ss_conf 8999999857------8704898677812055677668866340479--841777888898765689999-999999999 Q ss_pred EECCCCEEEEEEEEEEECCEEEEEEEEEEEEEECCC Q ss_conf 630785799999999999999999971069986176 Q gi|254780460|r 134 ILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTIDR 169 (172) Q Consensus 134 v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~de 169 (172) + ++..++..++++.+|+++++++-..+.+-.+. T Consensus 114 ~---g~~~~~~~~~~~~~g~~va~a~~~~v~~~~~~ 146 (158) T 2hbo_A 114 E---EDXLFTVRGRIWAGERTLITGTGVFKALSARK 146 (158) T ss_dssp E---ETTEEEEEEEEEETTEEEEEEEEEEEEEEECC T ss_pred E---CCCEEEEEEEEEECCEEEEEEEEEEEECCCCC T ss_conf 5---88699999999999999999999999858999 No 23 >>2pim_A Phenylacetic acid degradation-related protein; YP_298971.1, thioesterase superfamily, structural genomics; 2.20A {Ralstonia eutropha JMP134} (A:) Probab=97.43 E-value=0.0026 Score=39.60 Aligned_cols=111 Identities=14% Similarity=0.048 Sum_probs=75.0 Q ss_pred EEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEE Q ss_conf 56899997184413423578875078655300455689952112757888799886401233468826676304511410 Q gi|254780460|r 37 FHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRG 116 (172) Q Consensus 37 iDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~ 116 (172) -.++..++.+. |+++....+++. +. -....+-|-.+...+-++++..+...............+++|++ T Consensus 26 ~~~~~~~~~~~-----~~~~~~~~v~~~--~~----n~~g~vhGG~l~~l~D~a~~~~~~~~~~~~~~~~t~~l~i~f~~ 94 (141) T 2pim_A 26 GGVIRAVDLEA-----GSLESDYVATDA--FL----NPVGQVQGGXLGAXLDDVTAXLVTATLEDGASCSTLNLNLSFLR 94 (141) T ss_dssp TCEEEEEETTT-----TEEEEEEEECGG--GB----CTTSSBCHHHHHHHHHHHHHHHHHHTCCTTCCCEEEEEEEEECS T ss_pred CCEEEEEECCC-----CEEEEEEECCHH--HC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEC T ss_conf 99559987569-----899999973899--93----98883719999999999999999864676530111217889981 Q ss_pred EECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEE Q ss_conf 23379857999999889630785799999999999999999971069 Q gi|254780460|r 117 MVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRV 163 (172) Q Consensus 117 ~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~v 163 (172) +|.+|+ ++.+.++. +.++..++.+++++.+|+++++++-..+ T Consensus 95 pv~~g~--v~~~a~v~---~~gr~~~~v~v~i~~~g~lva~~~~t~~ 136 (141) T 2pim_A 95 PAQAGL--LRGRARLE---RRGRNVCNVVGELSQDGKLVATATATCX 136 (141) T ss_dssp CCCSEE--EEEEEEEE---EECSSEEEEEEEEEETTEEEEEEEEEEE T ss_pred CCCCCE--EEEEEEEE---EECCCEEEEEEEEEECCEEEEEEEEEEE T ss_conf 377878--99999999---9799899999999999989999999999 No 24 >>2c2i_A RV0130; hotdog, hydratase, lyase, structural proteomics in europe, spine, structural genomics; 1.8A {Mycobacterium tuberculosis} (A:) Probab=97.31 E-value=0.0011 Score=41.82 Aligned_cols=130 Identities=12% Similarity=-0.038 Sum_probs=70.3 Q ss_pred CC-CCCCEEEEEEEEEECCCCCCCCEEEEEE-EECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEE Q ss_conf 99-8641225689999718441342357887-507865530045568995211275788879988640123346882667 Q gi|254780460|r 29 LP-KPPMLMFHRITQISETGGNYNQGVVRAE-MDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRA 106 (172) Q Consensus 29 LP-~~p~lmiDrV~~i~~~~g~~g~G~i~ae-k~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~ 106 (172) ++ ..|....+.|++-+-.. +.. +.+. -.++-|+.|.+....+.++.||.+..=.+...+ .-............ T Consensus 14 vG~~~~~~~~~~vt~~~i~~--~a~--~~gd~np~h~d~~~A~~~g~~~~ia~g~~~~~~~~~~~-~~~~~~~~~~~~~~ 88 (151) T 2c2i_A 14 AGEKVGQSDWVTITQEEVNL--FAD--ATGDHQWIHVDPERAAAGPFGTTIAHGFXTLALLPRLQ-HQXYTVKGVKLAIN 88 (151) T ss_dssp TTSEEEECCCEECCHHHHHH--HHH--HHSCCCHHHHCHHHHHTSTTSSCBCCHHHHHHTHHHHH-HTTCEESSCSCEEE T ss_pred CCCEECCCCCEEECHHHHHH--HHH--HHCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCC-CCEECCCCCCEEEE T ss_conf 69983489999988999999--999--77899945158467411576861002311221222202-31000255413674 Q ss_pred EEECCCEEEEEECCCCCEEEEEEEEEEEEC--CCC--EEEEEEEEEEECCEEEEEEEEEEEEE Q ss_conf 630451141023379857999999889630--785--79999999999999999997106998 Q gi|254780460|r 107 VSVSNIKFRGMVTPDCKLVEYGIDFKKILR--GRV--VLGAADGWVKVNGKEIYQANDLRVCL 165 (172) Q Consensus 107 ~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~--~~~--~~~~~~g~~~vdg~~i~~a~~l~vgl 165 (172) .+..+++|+++|.||| +++.+.++..+.. .+. .++.+.+++..+|+++++++- .+.+ T Consensus 89 ~~~~~~~f~~pv~~GD-~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~ 149 (151) T 2c2i_A 89 YGLNKVRFPAPVPVGS-RVRATSSLVGVEDLGNGTVQATVSTTVEVEGSAKPACVAES-IVRY 149 (151) T ss_dssp EEEEEEECCSCCBTTC-EEEEEEEEEEEEEEETTEEEEEEEEEEEETTCSSCSEEEEE-EEEE T ss_pred ECCEEEEECCCCCCCC-EEEEEEEEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEE-EEEE T ss_conf 0101659857471153-88999999999993799289999999999799851999987-3400 No 25 >>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* (G:1283-1670) Probab=97.31 E-value=0.00083 Score=42.56 Aligned_cols=95 Identities=14% Similarity=0.115 Sum_probs=66.5 Q ss_pred ECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCC Q ss_conf 07865530045568995211275788879988640123346882667630451141023379857999999889630785 Q gi|254780460|r 60 DITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRV 139 (172) Q Consensus 60 ~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~ 139 (172) .|+-|+.|.+.+-...|+++|.+..-.+.+++.-.+.. .........+++|+++|.|||+ ++...+++.... +. T Consensus 289 piH~d~~~A~~~g~~~~i~~G~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~f~~pv~~gd~-l~~~~~~~~~~~-~~ 362 (388) T 2uva_G 289 PIHVSRVFSSYANLPGTITHGMYTSAAVRSLVETWAAE----NNIGRVRSYHVNMVGMVLPNDA-ITVKLEHVGMIA-GR 362 (388) T ss_dssp HHHHCHHHHHHTTCSSSCCCHHHHHHHHHHHHHHHTST----TCTTSCCEEEEEECSCCCTTCE-EEEEEEEEEEET-TE T ss_pred HHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC----CCCCCEEEEEEEEEEEECCCCE-EEEEEEEEEEEC-CC T ss_conf 21158889986599987125104999999999997503----8875237899887885348998-899999998856-88 Q ss_pred EEEEEEEEEEECCEEEEEEEE Q ss_conf 799999999999999999971 Q gi|254780460|r 140 VLGAADGWVKVNGKEIYQAND 160 (172) Q Consensus 140 ~~~~~~g~~~vdg~~i~~a~~ 160 (172) ..+.++..+.++|+++++++- T Consensus 363 ~~~~~~~~~~~~~~~v~~g~~ 383 (388) T 2uva_G 363 KIIKVDARNKDTDESVLQGEA 383 (388) T ss_dssp EEEEEEEEETTTCCEEEEEEE T ss_pred CEEEEEEEECCCCCEEEEEEE T ss_conf 589999998579968999899 No 26 >>1yoc_A Hypothetical protein PA1835; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa PAO1} (A:) Probab=97.23 E-value=0.014 Score=35.22 Aligned_cols=116 Identities=10% Similarity=-0.001 Sum_probs=72.2 Q ss_pred CCCCE--EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEE Q ss_conf 86412--2568999971844134235788750786553004556899521127578887998864012334688266763 Q gi|254780460|r 31 KPPML--MFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVS 108 (172) Q Consensus 31 ~~p~l--miDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~ 108 (172) ..||. +=-+++++++ |+++.+..++++ .. -...++-|-.+.-.+--+++..+ ............ T Consensus 25 ~~p~~~~~g~~~~~~~~-------~~~~~~~~~~~~--~~----n~~g~vhGG~~~~l~D~~~g~~~-~~~~~~~~~~~t 90 (147) T 1yoc_A 25 FAPYFASIAPQFVELRP-------GYAEVTFPKRRE--VL----NHIGTVHAIALCNAAELAAGTMT-DASIPAGHRWIP 90 (147) T ss_dssp HSGGGGGGCCEEEEEET-------TEEEEEECCCGG--GB----CTTSSBCHHHHHHHHHHHHHHHH-HHHSCTTEEEEE T ss_pred HCCHHHCCCCEEEEEEC-------CEEEEEEEECHH--HH----CCHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCEEEE T ss_conf 18912213749999939-------999999995579--93----85124338898999999999999-975898760688 Q ss_pred E-CCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEE Q ss_conf 0-451141023379857999999889630785799999999999999999971069 Q gi|254780460|r 109 V-SNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRV 163 (172) Q Consensus 109 ~-~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~v 163 (172) + -+++|++++..|+. .++++.++.++++..++.+++++.+|+++++++...+ T Consensus 91 ~~l~i~f~~p~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~va~~~~t~~ 143 (147) T 1yoc_A 91 RGMTVEYLAKATGDVR---AVADGSQIDWQATGNLVVPVVAYVDDKPVFRAEITMY 143 (147) T ss_dssp EEEEEEECSCCCSCEE---EEEECTTSCTTCCEEEEEEEEEEETTEEEEEEEEEEE T ss_pred EEEEEEEEEECCCCEE---EEEEEEEHHCCCCCEEEEEEEEECCCCEEEEEEEEEE T ss_conf 8888998740469779---9999974006564059999999849958999999999 No 27 >>1o0i_A Hypothetical protein HI1161; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.70A {Haemophilus influenzae} (A:) Probab=96.99 E-value=0.026 Score=33.68 Aligned_cols=128 Identities=11% Similarity=-0.044 Sum_probs=82.4 Q ss_pred CCCCHHHHHHHCCCCCCCCCCCCCCCCC--CEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHH Q ss_conf 5589889998418835579988899864--12256899997184413423578875078655300455689952112757 Q gi|254780460|r 6 SSYTYEEILRCGEGEMFGEGNAQLPKPP--MLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLG 83 (172) Q Consensus 6 ~~f~~~~i~~~~~g~~fg~~~~rLP~~p--~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~ 83 (172) ..++.+++..+ +.+| -.+=-++++++++ +++.+..++++ |.-....+-|..+ T Consensus 5 ~~~~~~~~~~~-------------~~~p~~~~lg~~i~~~~~g-------~~~~~~~~~~~------~~n~~g~~hGG~~ 58 (138) T 1o0i_A 5 KTFTLENLNQL-------------CSNSAVSHLGIEISAFGED-------WIEATXPVDHR------TXQPFGVLHGGVS 58 (138) T ss_dssp SCCCHHHHHHH-------------TSSSHHHHTTCEEEEECSS-------CEEEEEECSTT------TBCTTSSBCHHHH T ss_pred CCCCHHHHHHH-------------CCCHHHHHCCCEEEEEECC-------EEEEEEECCHH------HCCCCCEECHHHH T ss_conf 75899999765-------------6320888559899999699-------89999997989------9599980838999 Q ss_pred HHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEE Q ss_conf 8887998864012334688266763045114102337985799999988963078579999999999-999999997106 Q gi|254780460|r 84 LDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLR 162 (172) Q Consensus 84 iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~ 162 (172) ...+-.++++.+...-...........+++|.+++.+|+ ++.+.++ .+.++..++.+++++. ||+++++++... T Consensus 59 ~~l~D~a~~~~~~~~~~~~~~~~t~~~~i~f~~p~~~g~--i~~~a~v---~~~g~~~~~~~~~i~~~~g~lva~~~~~~ 133 (138) T 1o0i_A 59 VALAETIGSLAGSLCLEEGKTVVGLDINANHLRPVRSGK--VTARATP---INLGRNIQVWQIDIRTEENKLCCVSRLTL 133 (138) T ss_dssp HHHHHHHHHHHHHHTSCTTEEEEEEEEEEEECSCCCSSE--EEEEEEE---EEECSSEEEEEEEEECTTSCEEEEEEEEE T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCE--EEEEEEE---EECCCCEEEEEEEEECCCCCEEEEEEEEE T ss_conf 999999999999984688842688778899975688977--9999999---97488799999999918998999999999 Q ss_pred EE Q ss_conf 99 Q gi|254780460|r 163 VC 164 (172) Q Consensus 163 vg 164 (172) +. T Consensus 134 ~~ 135 (138) T 1o0i_A 134 SV 135 (138) T ss_dssp EE T ss_pred EE T ss_conf 99 No 28 >>2fs2_A Phenylacetic acid degradation protein PAAI; operon, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} (A:) Probab=96.91 E-value=0.03 Score=33.26 Aligned_cols=117 Identities=9% Similarity=-0.068 Sum_probs=78.1 Q ss_pred CCCCCC-EEEE-EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEE Q ss_conf 998641-2256-89999718441342357887507865530045568995211275788879988640123346882667 Q gi|254780460|r 29 LPKPPM-LMFH-RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRA 106 (172) Q Consensus 29 LP~~p~-lmiD-rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~ 106 (172) ++.+|| ..++ ++.+++++ .++....+.++.... ...+.|..+.+.+-.+++++.... +.... T Consensus 14 ~~~~p~~~~l~~~~~~~~~~-------~~~~~~~v~~~~~n~------~G~v~gG~~~~l~d~~~~~~~~~~---~~~~~ 77 (151) T 2fs2_A 14 YENDACAKALGIDIISXDEG-------FAVVTXTVTAQXLNG------HQSCHGGQLFSLADTAFAYACNSQ---GLAAV 77 (151) T ss_dssp HHHHHHHHHHTCEEEEEETT-------EEEEEEECCGGGBCT------TSBBCHHHHHHHHHHHHHHHHHTT---TCCCE T ss_pred HHCCHHHHHCCCEEEEEECC-------EEEEEEEECHHHCCC------CCCCCCCHHEEHHHHHHHHHHHHC---CCCEE T ss_conf 84589888639999999599-------999999907999899------993976503006889999999746---98706 Q ss_pred EEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEE Q ss_conf 63045114102337985799999988963078579999999999-999999997106998 Q gi|254780460|r 107 VSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCL 165 (172) Q Consensus 107 ~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl 165 (172) ....+++|.+++.+|+. ++.+.++ .+.++..++.+++++. ||+++++++-..+.+ T Consensus 78 t~~~~i~f~~pv~~g~~-v~~~a~v---~~~g~~~~~~~~~v~~~~g~lva~~~~~~~~~ 133 (151) T 2fs2_A 78 ASACTIDFLRPGFAGDT-LTATAQV---RHQGKQTGVYDIEIVNQQQKTVALFRGKSHRI 133 (151) T ss_dssp EEEEEEEECSCCBTTCE-EEEEEEE---EEECSSEEEEEEEEECTTSCEEEEEEEEEEC- T ss_pred EEEEEEEEEECCCCCCE-EEEEEEE---EEECCEEEEEEEEEECCCCCEEEEEEEEEEEE T ss_conf 78767789852689989-9999999---99331289999999978994999999999997 No 29 >>3exz_A MAOC-like dehydratase; Q2RSA1_rhort, NESG, RRR103A, structural genomics, PSI-2, protein structure initiative; 2.30A {Rhodospirillum rubrum atcc 11170} (A:) Probab=96.74 E-value=0.03 Score=33.28 Aligned_cols=96 Identities=8% Similarity=-0.044 Sum_probs=60.7 Q ss_pred CCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECC----CCEEE Q ss_conf 00455689952112757888799886401233468826676304511410233798579999998896307----85799 Q gi|254780460|r 67 FFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRG----RVVLG 142 (172) Q Consensus 67 ff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~----~~~~~ 142 (172) |.+..=.+++++||.+..--+..++. .+.............+++|+++|.||| +++.+.+|..+... +..++ T Consensus 44 ~A~~~g~~~~ia~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~f~~pv~~Gd-tl~~~~~v~~~~~~~~~~~~~~v 119 (154) T 3exz_A 44 AARHSLFGGLAASGWHTAAITXRLLV---TSGLPLAQGIIGAGTELSWPNPTRPGD-ELHVETTVLAITPSKSRPDRAIV 119 (154) T ss_dssp HHHTSTTCSCCCCHHHHHHHHHHHHH---HTTSCBTTCCCEEEEEEECSSCCCTTC-EEEEEEEEEEEEECSSCTTEEEE T ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHH---HCCCCCCCCEEEECCEEEECCCCCCCC-EEEEEEEEEEEEECCCCCCCEEE T ss_conf 75234567632167889999998876---314566410464020128888889998-56899999888733656983499 Q ss_pred EEEEEEEE-CCEEEEEEEEEEEEEEC Q ss_conf 99999999-99999999710699861 Q gi|254780460|r 143 AADGWVKV-NGKEIYQANDLRVCLTI 167 (172) Q Consensus 143 ~~~g~~~v-dg~~i~~a~~l~vgl~~ 167 (172) ..+.++.. +|++|++.+.. +.+.+ T Consensus 120 ~~~~~~~nq~g~~V~~~~~~-~~~~~ 144 (154) T 3exz_A 120 TCQSDTLNQRGEVVQRSTAK-VVVFR 144 (154) T ss_dssp EEEEEEECTTSCEEEEEEEE-EEEEC T ss_pred EEEEEEEECCCCEEEEEEEE-EEEEC T ss_conf 99999997999899998999-99988 No 30 >>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* (G:1261-1643) Probab=96.72 E-value=6.6e-05 Score=49.07 Aligned_cols=117 Identities=12% Similarity=0.062 Sum_probs=75.6 Q ss_pred CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCC--CCCEEEEE Q ss_conf 8641225689999718441342357887507865530045568995211275788879988640123346--88266763 Q gi|254780460|r 31 KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGE--LGKGRAVS 108 (172) Q Consensus 31 ~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~--~~~~~~~~ 108 (172) +.|++..++|++-+.. ..+...-+.|..++..||...+.+||.+ +.+|++++......... ........ T Consensus 259 ~~~~~~~~~v~~~~~~--------~~a~~sgd~npiH~d~~~A~~~g~~~~i-~hG~~~~~~~~~~~~~~~~~~~~~~~~ 329 (383) T 2uv8_G 259 PIPIAVLDSYTPSTNE--------PYARVSGDLNPIHVSRHFASYANLPGTI-THGMFSSASVRALIENWAADSVSSRVR 329 (383) T ss_dssp HHHHTSEEECSEEEEE--------EEEEEEEEEEECCSCSHHHHHHHTCCCG-GGTCHHHHHHTTCSSSCCCHHHHHHHH T ss_pred HHHHCCCCCCCCCCCC--------CCCCCCCEEEECCCCCCCCHHHCCCCCH-HHCCHHHHHHCCCCCCEECCCHHHHHH T ss_conf 8875698644554467--------8876662257678888730233278772-115888898659998713501288999 Q ss_pred ECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEE Q ss_conf 045114102337985799999988963078579999999999-9999999971 Q gi|254780460|r 109 VSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQAND 160 (172) Q Consensus 109 ~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~ 160 (172) ..+++|+++|.|||+ ++.+.++.+. +...+.++.++.+ +|+++++++- T Consensus 330 ~~~~~f~~pv~~gd~-l~~~~~~~~~---~~~~~~~~~~~~~~~g~~v~~~~~ 378 (383) T 2uv8_G 330 GYTCQFVDMVLPNTA-LKTSIQHVGM---INGRKLIKFETRNEDDVVVLTGEA 378 (383) T ss_dssp HHHHHHHHSTTCGGG-EEEEEEEECS---CCCSSCEEEEEEEEEEEETTEEEE T ss_pred HHHHHHHHCCCCCCC-EEEEEEEEEE---EECCCCEEEEEEEEEEEECCCEEE T ss_conf 999999850598750-6889999788---534899899999999894688079 No 31 >>3gek_A Putative thioesterase YHDA; X-RAY, structure genomics, NESG, KR113, Q9CHK5_lacla, structural genomics, PSI-2; 2.24A {Lactococcus lactis subsp} (A:) Probab=96.64 E-value=0.049 Score=32.01 Aligned_cols=108 Identities=10% Similarity=-0.139 Sum_probs=70.8 Q ss_pred CCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEE Q ss_conf 13423578875078655300455689952112757888799886401233468826676304511410233798579999 Q gi|254780460|r 49 NYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYG 128 (172) Q Consensus 49 ~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~ 128 (172) .+..|+++.+..+.++ |.....++-|......+-.+++..+.............-.++.|++++.+|+. ++.+ T Consensus 24 ~~~~~~~~~~~~v~~~------~~n~~G~v~gg~~~~l~d~~~g~~~~~~~~~~~~~v~~~~~i~f~~p~~~g~~-i~i~ 96 (146) T 3gek_A 24 VSKIYKFSSKXILSDF------HAQPQGFLNGGASLALAEITAGXASNAIGSGQYFAFGQSINANHLNPKKCEGF-VNAR 96 (146) T ss_dssp SSCCEEEEEEEECCGG------GBCTTSBBCHHHHHHHHHHHHHHHHHHHHTTSCEEEEEEEEEEECSCCBSSSE-EEEE T ss_pred EEEEEEEEEEEECCHH------HCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCC-EEEE T ss_conf 2333689999874654------16999888499799999999876631417754532304211054025556771-7999 Q ss_pred EEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEEE Q ss_conf 9988963078579999999999-9999999971069986 Q gi|254780460|r 129 IDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCLT 166 (172) Q Consensus 129 i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl~ 166 (172) .++.+ .++.....++.++. ||+++++++-..+.+- T Consensus 97 ~~v~~---~gr~~~~~~~~~~~~dg~lva~~~~~~v~~~ 132 (146) T 3gek_A 97 GLLLK---NGKRNHVWEIKITDENETLISQITVVNALVP 132 (146) T ss_dssp EEEEE---ECSSEEEEEEEEEETTCCEEEEEEEEEEEEC T ss_pred EEEEE---CCCEEEEEEEEEECCCCCEEEEEEEEEEEEC T ss_conf 99995---4741899999999399989999999999968 No 32 >>1zki_A Hypothetical protein PA5202; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa PAO1} (A:) Probab=96.54 E-value=0.057 Score=31.62 Aligned_cols=117 Identities=9% Similarity=0.010 Sum_probs=66.5 Q ss_pred CCCCCCE-EEE-EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEE Q ss_conf 9986412-256-89999718441342357887507865530045568995211275788879988640123346882667 Q gi|254780460|r 29 LPKPPML-MFH-RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRA 106 (172) Q Consensus 29 LP~~p~l-miD-rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~ 106 (172) ...+||. .+. +|.+++++ +++.+..+.++ +.. | ...+=|-.+.=.+-.++++............. T Consensus 11 ~~~~p~~~~~g~~i~~~~~~-------~~~~~~~~~~~--~~n-~---~g~~hGG~~~tl~D~~~g~~~~~~~~~~~~~~ 77 (133) T 1zki_A 11 QXISAYSELVGLDPVSLGDG-------VAEVRLPXAAH--LRN-R---GGVXHGGALFSLXDVTXGLACSSSHGFDRQSV 77 (133) T ss_dssp GSCCHHHHHHTCEEEEECSS-------EEEEEEECCGG--GBC-T---TSSBCHHHHHHHHHHHHHHHHHHHHCTTSCEE T ss_pred HHHHHHHHHHCCEEEEEECC-------EEEEEEECCHH--HCC-C---CCCEECEEEEEECCCCCCCCEEHHCCCCCCCE T ss_conf 14549999749999999599-------99999997989--949-9---99491452385311144100000113344211 Q ss_pred EEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEE Q ss_conf 630451141023379857999999889630785799999999999999999971069 Q gi|254780460|r 107 VSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRV 163 (172) Q Consensus 107 ~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~v 163 (172) ..-.+++|.+++..|+ ++.+.++ .+.++..++.+++++.+|+++++++-..+ T Consensus 78 t~~l~i~fl~p~~~g~--l~~~a~~---~~~g~~~~~~~~~i~~~g~~va~a~~t~~ 129 (133) T 1zki_A 78 TLECKINYIRAVADGE--VRCVARV---LHAGRRSLVVEAEVRQGDKLVAKGQGTFA 129 (133) T ss_dssp EEEEEEEECSCCCSSE--EEEEEEE---EEECSSEEEEEEEEEETTEEEEEEEEEEE T ss_pred EEEEEEEEECCCCCCE--EEEEEEE---EEECCCEEEEEEEEEECCEEEEEEEEEEE T ss_conf 1015889964899988--9999999---99089899999999999999999999999 No 33 >>3f5o_A Thioesterase superfamily member 2; hotdog fold, hydrolase; HET: UOC COA P6G; 1.70A {Homo sapiens} PDB: 2f0x_A* 2cy9_A (A:) Probab=96.46 E-value=0.065 Score=31.31 Aligned_cols=119 Identities=15% Similarity=0.018 Sum_probs=79.5 Q ss_pred CCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEE Q ss_conf 99864122568999971844134235788750786553004556899521127578887998864012334688266763 Q gi|254780460|r 29 LPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVS 108 (172) Q Consensus 29 LP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~ 108 (172) .|--+.++-.++.+++++ +++....+.++ |.....++-|..+...+-++.+..+. ........... T Consensus 19 ~~~~~~~~~~~~~~~~~~-------~~~~~~~v~~~------~~n~~G~v~gG~~~~~~d~~~~~~~~-~~~~~~~~~~~ 84 (148) T 3f5o_A 19 RNFERVLGKITLVSAAPG-------KVICEMKVEEE------HTNAIGTLHGGLTATLVDNISTMALL-CTERGAPGVSV 84 (148) T ss_dssp SSGGGGGTTCEEEEEETT-------EEEEEEECCGG------GBCTTSBBCHHHHHHHHHHHHHHHHH-TSSSCCCCEEE T ss_pred CCHHHHHCCEEEEEECCC-------EEEEEEECCHH------HCCCCCCCCHHHHHHHHHHHHHHHHH-HCCCCCCCEEE T ss_conf 887898598699998199-------99999996999------96988957163689999888888998-60789721224 Q ss_pred ECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE--CCEEEEEEEEEEEEE Q ss_conf 045114102337985799999988963078579999999999--999999997106998 Q gi|254780460|r 109 VSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV--NGKEIYQANDLRVCL 165 (172) Q Consensus 109 ~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v--dg~~i~~a~~l~vgl 165 (172) ..+++|+++|..|+. +..+.++.+ .++...+.+++++. +|+++++++...+.+ T Consensus 85 ~~~i~f~~pv~~g~~-l~~~~~v~~---~g~~~~~~~~~i~~~~~~~~~a~a~~~~v~~ 139 (148) T 3f5o_A 85 DMNITYMSPAKLGED-IVITAHVLK---QGKTLAFTSVDLTNKATGKLIAQGRHTKHLG 139 (148) T ss_dssp EEEEEECSCCBTTCE-EEEEEEEEE---ECSSEEEEEEEEEETTTCCEEEEEEEEEECC T ss_pred EEEEEEECCCCCCCE-EEEEEEEEE---ECCCEEEEEEEEEECCCCEEEEEEEEEEEEE T ss_conf 688899605799998-999999999---4887999999999999998999999999984 No 34 >>2bi0_A Hypothetical protein RV0216; conserved hypothetical, hotdog-fold, structural proteomics in europe, spine, structural genomics; 1.9A {Mycobacterium tuberculosis} (A:1-175) Probab=96.45 E-value=0.066 Score=31.27 Aligned_cols=98 Identities=6% Similarity=-0.054 Sum_probs=60.7 Q ss_pred CCCCCCCC-CCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCC---- Q ss_conf 55300455-6899521127578887998864012334688266763045114102337985799999988963078---- Q gi|254780460|r 64 NLWFFDCH-FKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGR---- 138 (172) Q Consensus 64 d~wff~gH-Fp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~---- 138 (172) |+.|.+.. |.+.++.||.+..-.+.+++.- .........+..+++|+++|.|||+ ++.+.++..+...+ T Consensus 53 D~~~A~~~g~~g~~i~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~f~~Pv~~GDt-l~~~~~v~~~~~~~~~~~ 126 (175) T 2bi0_A 53 DSDLCAAVTGXPGPLAHPGLVCDVAIGQSTL-----ATQRVKANLFYRGLRFHRFPAVGDT-LYTRTEVVGLRANSPKPG 126 (175) T ss_dssp CHHHHHHHHCCSSCBCCHHHHHHHHHHHHTT-----TTTTCSEEEEEECEEBSSCCBTTCE-EEEEEEEEEEEECCCCTT T ss_pred CHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC-----CCCCCCEEEEEEEEEEECCCCCCCE-EEEEEEEEEEEECCCCCC T ss_conf 9999985078887542528899998763003-----4676104434315578135689999-999999999860577888 Q ss_pred ---CEEEEEEEEEEE-CCEEEEEEEEEEEEEECC Q ss_conf ---579999999999-999999997106998617 Q gi|254780460|r 139 ---VVLGAADGWVKV-NGKEIYQANDLRVCLTID 168 (172) Q Consensus 139 ---~~~~~~~g~~~v-dg~~i~~a~~l~vgl~~d 168 (172) ..++..+.++.. +|++|++++.. +.+-+. T Consensus 127 ~~~~~~v~~~~~~~nq~g~~V~~~~~~-~~~~~~ 159 (175) T 2bi0_A 127 RAPTGLAGLRXTTIDRTDRLVLDFYRC-AXLPAS 159 (175) T ss_dssp SCCEEEEEEEEEEECTTCCEEEEEEEE-EEEECC T ss_pred CCCCEEEEEEEEEECCCCCEEEEEEEE-EEEECC T ss_conf 886379999999998999778999998-899826 No 35 >>1wlu_A PAAI protein, phenylacetic acid degradation protein PAAI; thioesterase, hot DOG fold, structural genomics; 1.45A {Thermus thermophilus HB8} (A:) Probab=95.76 E-value=0.14 Score=29.26 Aligned_cols=99 Identities=8% Similarity=-0.100 Sum_probs=64.0 Q ss_pred EEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEE Q ss_conf 35788750786553004556899521127578887998864012334688266763045114102337985799999988 Q gi|254780460|r 53 GVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFK 132 (172) Q Consensus 53 G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik 132 (172) ++++.+..|.+++== ...++-|......+-.+++.++.. .......-.+++|++++.+|+. ++.+.++. T Consensus 19 ~~~~~~~~v~~~~~d------~~G~v~gg~~~~~~d~a~~~~~~~----~~~~v~~~~~i~f~~p~~~g~~-i~i~a~v~ 87 (136) T 1wlu_A 19 GEAVVAGEVRADHLN------LHGTAHGGFLYALADSAFALASNT----RGPAVALSCRMDYFRPLGAGAR-VEARAVEV 87 (136) T ss_dssp TEEEEEEECCGGGBC------TTSSBCHHHHHHHHHHHHHHHHHT----TSCEEEEEEEEEECSCCCTTCE-EEEEEEEE T ss_pred CEEEEEEEECHHHCC------CCCEECCCHHHHHHHHHHHHHHHC----CCCCCEEEEEEEEEECCCCCCE-EEEEEEEE T ss_conf 999999996999989------998191532233225667766642----4553258889999625579988-99999999 Q ss_pred EEECCCCEEEEEEEEEEECCEEEEEEEEEEEEE Q ss_conf 963078579999999999999999997106998 Q gi|254780460|r 133 KILRGRVVLGAADGWVKVNGKEIYQANDLRVCL 165 (172) Q Consensus 133 ~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl 165 (172) ++ ++..+..+++++.+|+++++++-..+.+ T Consensus 88 ~~---g~~~~~~~~~i~~~~~~~a~~~~~~~~~ 117 (136) T 1wlu_A 88 NL---SRRTATYRVEVVSEGKLVALFTGTVFRL 117 (136) T ss_dssp EE---CSSEEEEEEEEEETTEEEEEEEEEEEEC T ss_pred EC---CCCEEEEEEEEEECCEEEEEEEEEEEEE T ss_conf 86---8849999999999999999999999999 No 36 >>1s9c_A Peroxisomal multifunctional enzyme type 2; hot-DOG fold, hydratase 2 motif, lyase; 3.00A {Homo sapiens} (A:) Probab=95.54 E-value=0.046 Score=32.16 Aligned_cols=89 Identities=10% Similarity=-0.039 Sum_probs=50.8 Q ss_pred CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCE Q ss_conf 78655300455689952112757888799886401233468826676304511410233798579999998896307857 Q gi|254780460|r 61 ITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVV 140 (172) Q Consensus 61 i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~ 140 (172) |+-|.-|.+..=.+.++++|.+..-.+..++.- ......+...+..+++|+++|.|||+ ++...++. .+ T Consensus 197 iH~d~~~a~~~g~~~~i~~G~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~f~~pv~~gd~-l~~~~~~~----~~-- 265 (298) T 1s9c_A 197 LHIDPNFASLAGFDKPILHGLCTFGFSARRVLQ----QFADNDVSRFKAVKARFAKPVYPGQT-LQTEMWKE----GN-- 265 (298) T ss_dssp GGTCHHHHHTTTCSSCCCCHHHHHHHHHHHHHH----HHSTTCGGGEEEEEEEECSCCCTTCE-EEEEEEEE----TT-- T ss_pred EECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHH----HHCCCCHHHEEEEEEEECCCCCCCCE-EEEEEEEE----CC-- T ss_conf 776999995568887101556788998753333----31355700078899998468799999-99999997----99-- Q ss_pred EEEEEEEEEECCEEEEEEEE Q ss_conf 99999999999999999971 Q gi|254780460|r 141 LGAADGWVKVNGKEIYQAND 160 (172) Q Consensus 141 ~~~~~g~~~vdg~~i~~a~~ 160 (172) .+.++.....+|+++++++- T Consensus 266 ~~~~~~~~~~~g~~v~~~~~ 285 (298) T 1s9c_A 266 RIHFQTKVQETGDIVISNAY 285 (298) T ss_dssp EEEEEEEETTTTEEEEEEEE T ss_pred EEEEEEEECCCCEEEEECCE T ss_conf 99999999239949995948 No 37 >>3khp_A MAOC family protein; ssgcid, NIH, niaid, decode, university of washington, emerald biostructures, SBRI, dehydrogenase; HET: TLA; 2.30A {Mycobacterium tuberculosis H37RV} (A:) Probab=95.36 E-value=0.066 Score=31.25 Aligned_cols=92 Identities=11% Similarity=0.013 Sum_probs=50.3 Q ss_pred CCCCCCCC-CCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCC Q ss_conf 78655300-45568995211275788879988640123346882667630451141023379857999999889630785 Q gi|254780460|r 61 ITPNLWFF-DCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRV 139 (172) Q Consensus 61 i~~d~wff-~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~ 139 (172) |+-|..|- +..-..+++++|.+..=.+..+..-.. ...........+++|+++|.|||+ ++.+.+++ ..+. T Consensus 211 iH~d~~~~a~~~G~~~~ivhG~~~~~~~~~~~~~~~----~~~~~~~~~~~~~rf~~Pv~~gd~-l~~~~~~~---~~~~ 282 (311) T 3khp_A 211 LHSDPWFATQLAGFPKPILHGLCTYGVAGRALVAEL----GGGVAANITSIAARFTKPVFPGET-LSTVIWRT---EPGR 282 (311) T ss_dssp GGTCHHHHHHTTCCSSCCCCHHHHHHHHHHHHHHHT----TTTCGGGEEEEEEEECSCCCTTCC-EEEEEEEE---ETTE T ss_pred CCCCHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHH----CCCCCEEEEEEEEEEECCCCCCCE-EEEEEEEE---CCCE T ss_conf 588888998635899725027788888865456753----688762699999993036799999-99999996---6986 Q ss_pred EEEEEEEEEEE-CCEEEEEEEE Q ss_conf 79999999999-9999999971 Q gi|254780460|r 140 VLGAADGWVKV-NGKEIYQAND 160 (172) Q Consensus 140 ~~~~~~g~~~v-dg~~i~~a~~ 160 (172) ..+..+..+.+ +|+++++.+- T Consensus 283 ~~~~~~~~~~n~~g~~v~~~~~ 304 (311) T 3khp_A 283 AVFRTEVAGSDGAEARVVLDDG 304 (311) T ss_dssp EEEEEEECC----CCEEEEEEE T ss_pred EEEEEEEEEEECCCCCEEEECE T ss_conf 9999999998388883999077 No 38 >>1pn2_A Peroxisomal hydratase-dehydrogenase-epimerase; hot-DOG fold, hydratase 2 motif, lyase; 1.95A {Candida tropicalis} (A:) Probab=95.32 E-value=0.067 Score=31.22 Aligned_cols=47 Identities=13% Similarity=-0.020 Sum_probs=32.4 Q ss_pred EECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEE Q ss_conf 30451141023379857999999889630785799999999999999999971 Q gi|254780460|r 108 SVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQAND 160 (172) Q Consensus 108 ~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~ 160 (172) ...+++|+++|.|||+ +++.+++. ....+.++..+..+|+++++++- T Consensus 224 ~~~~~rf~~pv~~gd~-l~~~~~~~-----~~~~~~~~~~~~~~~~~v~~g~~ 270 (280) T 1pn2_A 224 NEIKARFTGIVFPGET-LRVLAWKE-----SDDTIVFQTHVVDRGTIAINNAA 270 (280) T ss_dssp EEEEEEECSCCCTTCE-EEEEEEEC-----SSSEEEEEEEETTTTEEEEEEEE T ss_pred EEEEEEECCCCCCCCE-EEEEEEEE-----CCCEEEEEEEECCCCEEEEECCE T ss_conf 6899997268578999-99999994-----79889999999339989995978 No 39 >>3kg8_A CURJ; polyketide synthase, double hotdog fold, dehydratase; 2.45A {Lyngbya majuscula} (A:) Probab=95.26 E-value=0.22 Score=28.20 Aligned_cols=124 Identities=11% Similarity=-0.052 Sum_probs=77.2 Q ss_pred CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCC--EEEEE Q ss_conf 8641225689999718441342357887507865530045568995211275788879988640123346882--66763 Q gi|254780460|r 31 KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGK--GRAVS 108 (172) Q Consensus 31 ~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~--~~~~~ 108 (172) ++.|.-|.+|.. .. +...++-.++.+.... .+..+-| .+++++.|++.+++........ ..-.+ T Consensus 179 g~~f~~i~~i~~-~~-------~~~~a~~~~~~~~~~~----~~~~~hP--~llD~~~q~~~~~~~~~~~~~~~~~vP~~ 244 (308) T 3kg8_A 179 GQSFRWIEQVWL-GE-------GEVLCQMKVPKTILNT----TKYQLHP--TLVDSCFQSIIALVLDQSGNKNETFVPFS 244 (308) T ss_dssp CGGGCCEEEEEE-CS-------SEEEEEEECCTTCCCG----GGCSSCH--HHHHHHHHGGGGGSTTCCSCTTCEEEEEE T ss_pred CCCCCCCCEEEE-CC-------CCEEEEEECCCCCCCC----CCCCCCH--HHHHHHHHHHHHHHCCCCCCCCCEEEECE T ss_conf 885322317998-89-------9179988567333556----6654590--89869999999972455678982783048 Q ss_pred ECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEEECCCCC Q ss_conf 045114102337985799999988963078579999999999-999999997106998617688 Q gi|254780460|r 109 VSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCLTIDRGV 171 (172) Q Consensus 109 ~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl~~de~~ 171 (172) ++.+.+.+...+..... .+. .+..........+|..++- +|+++++++++.+.-.+.+.+ T Consensus 245 i~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~di~l~d~~G~~~~~~~gl~~~~v~~~~~ 305 (308) T 3kg8_A 245 IDKFTFYNSSDNDLLWC--YTC-GSKDKQSGEKFKADIQLFDQHGQLVAQVIGFEGRKANPKIL 305 (308) T ss_dssp EEEEEECCCCCCSEEEE--EEE-EEECSSCTTEEEEEEEEECTTSCEEEEEEEEEEEEECGGGG T ss_pred EEEEEEECCCCCCEEEE--EEE-EECCCCCCCEEEEEEEEECCCCCEEEEEEEEEEEECCHHHH T ss_conf 95999972488875999--999-30466689889999999989999999997689987899997 No 40 >>3kg7_A CURH; polyketide synthase, double hotdog fold, dehydratase; 2.77A {Lyngbya majuscula} (A:) Probab=95.25 E-value=0.14 Score=29.25 Aligned_cols=122 Identities=14% Similarity=0.099 Sum_probs=71.5 Q ss_pred CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCE-EEEEE Q ss_conf 86412256899997184413423578875078655300455689952112757888799886401233468826-67630 Q gi|254780460|r 31 KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKG-RAVSV 109 (172) Q Consensus 31 ~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~-~~~~~ 109 (172) +|.|..|.++.. .. +.+.++..++.+....... ..+-| ..++++.|++.++.......... .-.++ T Consensus 165 G~~fq~i~~i~~-~~-------~~~~a~~~~~~~~~~~~~~---~~~hP--~llD~~~q~~~~~~~~~~~~~~~~lP~~i 231 (293) T 3kg7_A 165 GPXLQAVRQAWI-GE-------ETSLLEIEVPKALAFQLAG---EPIHP--VLIDACTRLTPDLFDFSSDSGVFWAPWRV 231 (293) T ss_dssp CTTTCCEEEEEE-CS-------SCEEEEEECCTTTGGGCCS---CSSCH--HHHHHTTSCCTTGGGSCCSSCCEEEEEEE T ss_pred CCCCCCCEEEEE-CC-------CEEEEEEECCCCCCCCCCC---CCCCH--HHHHHHHHHHHHHHCCCCCCCCEEEEEEE T ss_conf 764332307999-79-------8058888548411345556---65687--89889999999973555678953410799 Q ss_pred CCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEEECC Q ss_conf 45114102337985799999988963078579999999999-999999997106998617 Q gi|254780460|r 110 SNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCLTID 168 (172) Q Consensus 110 ~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl~~d 168 (172) +.+.+.++...... +.+..+...........+|..++- ||+++++++++.+.-.+. T Consensus 232 ~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~di~v~d~~G~~l~~i~g~~~~~v~~ 288 (293) T 3kg7_A 232 KEXTLSHPTPSRFY---AYVEEPSRVNEQLQTRSYDIQLLDETGQAFGRINGFTVKRAPS 288 (293) T ss_dssp EEEEESSCCCSEEE---EEECSCCEEETTTTEEEEEEEEECSSSBEEEEEEEEEEEEECH T ss_pred EEEEEECCCCCEEE---EEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEEEEEEECCH T ss_conf 89999668997399---9999932447889769999999999999999998699999998 No 41 >>2ov9_A Hypothetical protein; rhodococcus SP. RHA1, RHA08564, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Rhodococcus SP} (A:) Probab=94.88 E-value=0.28 Score=27.55 Aligned_cols=101 Identities=15% Similarity=0.118 Sum_probs=64.1 Q ss_pred EEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEE Q ss_conf 35788750786553004556899521127578887998864012334688266763045114102337985799999988 Q gi|254780460|r 53 GVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFK 132 (172) Q Consensus 53 G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik 132 (172) |.++....+.+. +. -...++-|-.+.-.+-.++++.... ..........++.|+++|..|+. ++++.++. T Consensus 110 ~~~~~~~~~~~~--~~----n~~g~vhGG~l~~~~D~~~~~~~~~---~~~~~~t~~~~i~f~~pv~~g~~-l~~~a~v~ 179 (216) T 2ov9_A 110 GSVRGTVTLTIP--YQ----GPPGHVHGGVSALLLDHVLGVANAW---GGKAGXTAQLSTRYHRPTPLFEP-LTLTGKLX 179 (216) T ss_dssp SCEEEEEECCGG--GB----SSTTBBCHHHHHHHHHHHHHHHHHH---TTCCCEEEEEEEEECSCCBSSSE-EEEEEEEE T ss_pred CEEEEEEEECHH--HC----CCCCEEEHHHHHHHHHHHHHHHHHH---CCCCEEEEEEEEEEEECCCCCCE-EEEEEEEE T ss_conf 989999998989--96----9998025889999999999999970---59972777888888444677968-99999999 Q ss_pred EEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEEE Q ss_conf 963078579999999999-9999999971069986 Q gi|254780460|r 133 KILRGRVVLGAADGWVKV-NGKEIYQANDLRVCLT 166 (172) Q Consensus 133 ~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl~ 166 (172) ++ ++..++.++.++. ||+++++++-..+.+- T Consensus 180 ~~---~~r~~~v~~~i~~~~g~~~a~a~~~~v~~~ 211 (216) T 2ov9_A 180 SV---DGRKITTAGDIRTADGQVCVSVEGLFVDKT 211 (216) T ss_dssp EE---ETTEEEEEEEEECTTCCEEEEEEEEEEC-- T ss_pred EE---CCCEEEEEEEEEECCCCEEEEEEEEEEECC T ss_conf 96---797999999999599999999999999658 No 42 >>3e29_A Uncharacterized protein Q7WE92_borbr; Q7WE92 NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Bordetella bronchiseptica} (A:) Probab=94.66 E-value=0.32 Score=27.21 Aligned_cols=117 Identities=8% Similarity=0.049 Sum_probs=70.2 Q ss_pred CCCC--EEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEE Q ss_conf 8641--22568999971844134235788750786553004556899521127578887998864012334688266763 Q gi|254780460|r 31 KPPM--LMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVS 108 (172) Q Consensus 31 ~~p~--lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~ 108 (172) .+|| .|=-+|++++++ +++.+..++++ +..+|. -.++-|..+...+--++++.+..... ...... T Consensus 15 ~~p~~~~lg~~i~~~~~g-------~~~~~~~~~~~--~~~~~~--~G~~hGG~l~~l~D~~~~~~~~~~~~--~~~vt~ 81 (144) T 3e29_A 15 RSPFNRWLGXSVLEAGEQ-------GIVLGIKWREE--LISSPE--IRSTHGGILATLVDAAGDYAVALKTG--HPVPTX 81 (144) T ss_dssp TCHHHHHTTCEEEEESSS-------CEEEEECCCGG--GBSCTT--TTCBCHHHHHHHHHHHHHHHHHHHHS--SCCCEE T ss_pred CCCHHHHHCCEEEEEECC-------EEEEEEECCHH--HCCCCC--CCEEECCCCCCCCCCCCCEEEEECCC--CCEEEE T ss_conf 685899809899999699-------99999992899--928888--86581453212345501013451169--832789 Q ss_pred ECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEE Q ss_conf 045114102337985799999988963078579999999999-999999997106998 Q gi|254780460|r 109 VSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCL 165 (172) Q Consensus 109 ~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl 165 (172) -.++.|.+++.+|+ ++.+.+ +.+.++...+.+++++- ||+++++++-..+.+ T Consensus 82 ~~~i~fl~p~~~g~--v~~~a~---v~~~gr~~~~~~~~v~~~~g~~va~a~~t~~~~ 134 (144) T 3e29_A 82 DXHVDYHRVATPGD--LRAEGQ---VIHFGKRFATAHARVLDXDGNLVASGRALYLIR 134 (144) T ss_dssp EEEEEECSCCCSSC--EEEEEE---EEEECSSEEEEEEEEEETTCCEEEEEEEEEECC T ss_pred EEEEEEECCCCCCE--EEEEEE---EEEECCCEEEEEEEEEECCCCEEEEEEEEEEEC T ss_conf 98999962699977--999999---999489799999999979999999999999956 No 43 >>3kg6_A CURF; polyketide synthase, double hotdog fold, dehydratase; 2.70A {Lyngbya majuscula} (A:) Probab=94.63 E-value=0.32 Score=27.17 Aligned_cols=76 Identities=12% Similarity=0.072 Sum_probs=45.3 Q ss_pred EEEEEEEECCCCC-CCCCCCC-CCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEC-CCCCEEEEEE Q ss_conf 3578875078655-3004556-89952112757888799886401233468826676304511410233-7985799999 Q gi|254780460|r 53 GVVRAEMDITPNL-WFFDCHF-KNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVT-PDCKLVEYGI 129 (172) Q Consensus 53 G~i~aek~i~~d~-wff~gHF-p~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~-Pgd~~i~~~i 129 (172) +.++.+..++.++ +|+.+|- -+.|++||+..+|.+++++..... ......+.+++|..++. +.+..+++++ T Consensus 18 ~~~~~~~~l~~~~~~~l~dH~v~g~~i~P~~~~lel~~~a~~~~~~------~~~~~~l~di~~~~pl~~~~~~~~~~~i 91 (285) T 3kg6_A 18 DQHRFQSYIGAESPGYLNHHQVFGKVLFPSTGYLEIAASAGKSLFT------SQEQVVVSDVDILQSLVIPETEIKTVQT 91 (285) T ss_dssp SEEEEEEEEBTTBTGGGGGEEETTEEECCHHHHHHHHHHHHHHHCC------SSSEEEEEEEEECSCCEECTTCCEEEEE T ss_pred CEEEEEEEECCCCCCHHHCCEECCEEEECHHHHHHHHHHHHHHHCC------CCCCEEEEEEEEEECCCCCCCCCEEEEE T ss_conf 8189999987886975217889999983279999999999998526------5774699989998233028999889999 Q ss_pred EEEEE Q ss_conf 98896 Q gi|254780460|r 130 DFKKI 134 (172) Q Consensus 130 ~ik~v 134 (172) .+... T Consensus 92 ~l~~~ 96 (285) T 3kg6_A 92 VVSFA 96 (285) T ss_dssp EEEEE T ss_pred EEECC T ss_conf 99716 No 44 >>1q4t_A Thioesterase; hot-DOG, hydrolase; HET: 4CO; 1.60A {Arthrobacter SP} (A:) Probab=94.58 E-value=0.33 Score=27.09 Aligned_cols=118 Identities=9% Similarity=-0.099 Sum_probs=68.3 Q ss_pred CCCCE--EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCC-CCCCCCEEEE Q ss_conf 86412--25689999718441342357887507865530045568995211275788879988640123-3468826676 Q gi|254780460|r 31 KPPML--MFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGW-LGELGKGRAV 107 (172) Q Consensus 31 ~~p~l--miDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~-~~~~~~~~~~ 107 (172) .+||. +=-++.++++ |+++....++++ +.. ....+-|..+.-.+--++++.+.. .......... T Consensus 27 ~~p~~~~lg~~~~~~~~-------g~~~~~~~~~~~--~~n----~~g~vhGG~l~~l~D~~~~~~~~~~~~~~~~~~~t 93 (151) T 1q4t_A 27 EQTLDGTVGFVIDEMTP-------ERATASVEVTDT--LRQ----RWGLVHGGAYCALAEMLATEATVAVVHEKGMMAVG 93 (151) T ss_dssp GGSHHHHHTCEEEEECS-------SEEEEEEECCGG--GBC----TTSSBCHHHHHHHHHHHHHHHHHHHHGGGTEEEEE T ss_pred HHHHHHHCCEEEEEEEC-------CEEEEEEECCHH--HCC----CCCCEEHHHEEEEHHCCCCCEEEEEECCCCCEEEE T ss_conf 44476406849999809-------989999987989--949----99827246335413304411257650677706775 Q ss_pred EECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEEE Q ss_conf 3045114102337985799999988963078579999999999-9999999971069986 Q gi|254780460|r 108 SVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCLT 166 (172) Q Consensus 108 ~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl~ 166 (172) ...+++|++++.+|+- +.+.+ +.+.++..++.+++++. +|+++++++.-.+-+- T Consensus 94 ~~l~i~f~~pv~~g~i--~~~a~---~~~~~~~~~~~~~~v~~~~g~~~a~a~~t~~~~~ 148 (151) T 1q4t_A 94 QSNHTSFFRPVKEGHV--RAEAV---RIHAGSTTWFWDVSLRDDAGRLCAVSSMSIAVRP 148 (151) T ss_dssp EEEEEEESSCCCSSEE--EEEEE---EEEECSSEEEEEEEEECTTCCEEEEEEEEEEEEE T ss_pred EEEEEEEEECCCCCCE--EEEEE---EEECCCCEEEEEEEEECCCCCEEEEEEEEEEEEC T ss_conf 5335578500379943--89999---9985788999999999899999999989998867 No 45 >>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* (A:833-1109) Probab=93.45 E-value=0.36 Score=26.87 Aligned_cols=73 Identities=12% Similarity=0.136 Sum_probs=45.9 Q ss_pred EEEEEECCCCCCCCCCC-CCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEE-CCCCCEEEEEEE Q ss_conf 78875078655300455-68995211275788879988640123346882667630451141023-379857999999 Q gi|254780460|r 55 VRAEMDITPNLWFFDCH-FKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMV-TPDCKLVEYGID 130 (172) Q Consensus 55 i~aek~i~~d~wff~gH-Fp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V-~Pgd~~i~~~i~ 130 (172) +....+++.+++|.++| .-+.||+||+..+|.+++++.-..... .......+.+++|..++ ++.+..+...+. T Consensus 30 ~~~~l~~~~~~~~l~dH~v~g~~vlP~~~~le~~~~a~~~~~~~~---~~~~~~~l~~i~~~~pl~l~~~~~~~i~~~ 104 (277) T 2vz8_A 30 YKFDVSPESPDHYLVDHCIDGRVLFPGTGYLWLTWKTLARALSQN---LEETPVVFEDVTLHQATILPKTGTVSLEVR 104 (277) T ss_dssp EEEECSTTSGGGGGGGCEETTEEECCHHHHHHHHHHHHHHHTTCC---GGGCCEEEEEEEECSCCEECSSSEEEEEEE T ss_pred CCCCCCCCCCHHHHCCEEECCEEEEECHHHHHHHHHHHHHHHCCC---CCCCCEEEEEECCCCCCEECCCCCEEEEEE T ss_conf 025768543101102102588288504648999999999751455---665752886530346717579986899999 No 46 >>3kg9_A CURK; polyketide synthase, double hotdog fold, dehydratase; 1.70A {Lyngbya majuscula} (A:) Probab=93.43 E-value=0.56 Score=25.76 Aligned_cols=74 Identities=14% Similarity=0.096 Sum_probs=36.9 Q ss_pred EEEEEEECCCCC-CCCCCCCC-CCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECC-CCCEEEEEEE Q ss_conf 578875078655-30045568-99521127578887998864012334688266763045114102337-9857999999 Q gi|254780460|r 54 VVRAEMDITPNL-WFFDCHFK-NDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTP-DCKLVEYGID 130 (172) Q Consensus 54 ~i~aek~i~~d~-wff~gHFp-~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~P-gd~~i~~~i~ 130 (172) .++.+..++.++ +|..+|-. +.||+||+..+|.+++++..... ......+.+++|..++.- .+..+.+++. T Consensus 24 ~~~~~~~~~~~~~~~l~dH~v~g~~vlP~a~~~e~~~~a~~~~~~------~~~~~~~~~v~~~~pl~~~~~~~~~i~v~ 97 (296) T 3kg9_A 24 QHHFQSYLTAESPAYLSQHQVFNKVLFPATGYLEIAAAVGKNLLT------TGEQVVVSDVTIVRGLVIPETDIKTVQTV 97 (296) T ss_dssp EEEEEEEEETTBSGGGGGEEETTEEBCCHHHHHHHHHHHHHHSCC------SSCEEEEEEEEECSCCBCCTTCEEEEEEE T ss_pred EEEEEEEECCCCCCCCCCCEECCEEEEEHHHHHHHHHHHHHHHCC------CCCCEEEEEEEECCCCCCCCCCCEEEEEE T ss_conf 289999988887973148899999986279999999999998527------88747999889825630489998799999 Q ss_pred EEE Q ss_conf 889 Q gi|254780460|r 131 FKK 133 (172) Q Consensus 131 ik~ 133 (172) +.. T Consensus 98 ~~~ 100 (296) T 3kg9_A 98 IST 100 (296) T ss_dssp EEE T ss_pred EEE T ss_conf 972 No 47 >>2eis_A Hypothetical protein TTHB207; COA binding motif, NPPSFA, national project on protein structural and functional analyses; HET: COA; 2.10A {Thermus thermophilus HB8} (A:) Probab=93.19 E-value=0.61 Score=25.53 Aligned_cols=101 Identities=14% Similarity=-0.026 Sum_probs=63.5 Q ss_pred EEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEE Q ss_conf 78875078655300455689952112757888799886401233468826676304511410233798579999998896 Q gi|254780460|r 55 VRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKI 134 (172) Q Consensus 55 i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v 134 (172) ++.+..|.+.+= -..-++-|.....-+-.+.+.++. .............+++|++++.+||. ++.+.++.++ T Consensus 4 ~~~~~~V~~~~~------d~~G~v~gg~~~~~~d~a~~~~~~-~~~~~~~~~~~~~~i~f~~p~~~gd~-l~~~~~v~~~ 75 (133) T 2eis_A 4 TRXVYPVFPGET------NHYGTLFGGTVLAWXDQAAFVAAT-RHARKKVVTVHADAVDFKRPVPLGAI-VELVARLKEV 75 (133) T ss_dssp EEEEEECCGGGB------CTTSBBCHHHHHHHHHHHHHHHHH-HHHTSCEEEEEEEEEEECSCCBTTCE-EEEEEEEEEE T ss_pred EEEEEEECHHHC------CCCCCCHHHHHHHHHHHHHHHHHH-HHCCCCCCEEEEEEEEEEECCCCCCE-EEEEEEEEEC T ss_conf 199999883345------889829499999999999999999-85699862799878999720167748-9999999982 Q ss_pred ECCCCEEEEEEEEEEEC-------CEEEEEEEEEEEEEE Q ss_conf 30785799999999999-------999999971069986 Q gi|254780460|r 135 LRGRVVLGAADGWVKVN-------GKEIYQANDLRVCLT 166 (172) Q Consensus 135 ~~~~~~~~~~~g~~~vd-------g~~i~~a~~l~vgl~ 166 (172) ++..+..+++++.. ++++++++-..+.+- T Consensus 76 ---g~~s~~~~~~~~~~~~~~~~~~~lva~a~~t~v~~~ 111 (133) T 2eis_A 76 ---GRTSXRVEVEXWVEPVKEGEEAYLAARGGFVLVAVD 111 (133) T ss_dssp ---CSSEEEEEEEEEECCCSTTCCCEEEEEEEEEEEEBC T ss_pred ---CCEEEEEEEEEEEEECCCCCEEEEEEEEEEEEEEEC T ss_conf ---554399989999960677978999999999999989 No 48 >>3kg7_A CURH; polyketide synthase, double hotdog fold, dehydratase; 2.77A {Lyngbya majuscula} (A:) Probab=93.06 E-value=0.37 Score=26.83 Aligned_cols=60 Identities=18% Similarity=0.197 Sum_probs=44.2 Q ss_pred CCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCC-CCCCCCC-CCCCEEEHHHHHHHHHHHHHH Q ss_conf 89986412256899997184413423578875078655-3004556-899521127578887998864 Q gi|254780460|r 28 QLPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNL-WFFDCHF-KNDPVMPGCLGLDALWQLTGF 93 (172) Q Consensus 28 rLP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~-wff~gHF-p~~PvmPGvL~iEa~~Ql~~~ 93 (172) +++.++--|+++.+..... +..+.+..++.++ ||..+|- -+.||+||+..+|.+++++.- T Consensus 3 ~~~~~~hpllg~~~~~~~~------~~~~~~~~l~~~~~p~l~dH~v~g~~vlP~~~~le~~~~a~~~ 64 (293) T 3kg7_A 3 ASGQQVHRLLGNKLELAST------GQTIYHQDINLNNHPWIGDHRVYDTPVIPGVSYIAXTLAAVGV 64 (293) T ss_dssp -----CBTTTBEEEECTTT------CCEEEEEEESTTTCGGGGGEEETTEEBCCTTHHHHHHHHHHCS T ss_pred CCCCCCCCCCCCCCCCCCC------CCEEEEEEECCCCCCCCCCCEECCEEEECHHHHHHHHHHHHHC T ss_conf 8889988889973456899------9479999987887960006789999995779999999998524 No 49 >>1sh8_A Hypothetical protein PA5026; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.50A {Pseudomonas aeruginosa} (A:) Probab=91.37 E-value=1 Score=24.17 Aligned_cols=122 Identities=16% Similarity=0.046 Sum_probs=71.8 Q ss_pred CCCCE-EEE-EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCC-CCCC-EEE Q ss_conf 86412-256-8999971844134235788750786553004556899521127578887998864012334-6882-667 Q gi|254780460|r 31 KPPML-MFH-RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLG-ELGK-GRA 106 (172) Q Consensus 31 ~~p~l-miD-rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~-~~~~-~~~ 106 (172) .+||. .+. ||.+++++ +++.+..+.++ .. ....|-|-.+. +++-..+.++.... .... ... T Consensus 17 ~~p~~~~lg~~i~~~~~g-------~~~~~~~~~~~---~n----~~g~~hGG~~~-~laD~a~g~a~~~~~~~~~~~~~ 81 (154) T 1sh8_A 17 KIAFVQRSGLRAEVLEPG-------YVRLRMPGAGN---EN----HIGSMYAGALF-TLAELPGGALFLTSFDSARFYPI 81 (154) T ss_dssp SSHHHHHHTCEEEEEETT-------EEEEEECSTTC---BC----TTSSBCHHHHH-HHHHTHHHHHHHHHSCTTTEEEE T ss_pred HCHHHHHCCCEEEEEECC-------EEEEEEECCCC---CC----CCCCEEEEHHH-HHHHHHHHHHHHHHCCCCCCEEE T ss_conf 374999749799999799-------99999985720---18----98718982116-76889999999962788880699 Q ss_pred EEECCCEEEEEECCCCCEEEEEEE------EE-EEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEEECC Q ss_conf 630451141023379857999999------88-963078579999999999-999999997106998617 Q gi|254780460|r 107 VSVSNIKFRGMVTPDCKLVEYGID------FK-KILRGRVVLGAADGWVKV-NGKEIYQANDLRVCLTID 168 (172) Q Consensus 107 ~~~~~vkfr~~V~Pgd~~i~~~i~------ik-~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl~~d 168 (172) ..--++.|.+++..|. ++++++. +. ++.+.++..++.+++++. ||+++++++....-+-.+ T Consensus 82 t~~~~v~f~~p~~~g~-~~~~~~~~~~~~~~~~~~~~~gr~~~~~~~~i~~~~G~~~a~~~~~~~~~~~~ 150 (154) T 1sh8_A 82 VKEMTLRFRRPAKGDI-RVEARLDAERIRQLETEAGERGKAEYSLELQLTDEQGEVVAESAALYQLRSHA 150 (154) T ss_dssp EEEEEEEECSCCCSCE-EEEEECCHHHHHHHHHHHHHHSEEEEEEEEEEECTTCCEEEEEEEEEEEEECC T ss_pred EEEEEEEEEECCCCCE-EEEEEEEEEHHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEEEEEEEECCCC T ss_conf 9873568850457868-99999721157678888751683699999999979999999999999997799 No 50 >>1vh9_A P15, hypothetical protein YBDB; structural genomics, unknown function; 2.15A {Escherichia coli} (A:) Probab=91.29 E-value=1 Score=24.12 Aligned_cols=118 Identities=12% Similarity=-0.056 Sum_probs=73.8 Q ss_pred CCCCCCE--EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEE Q ss_conf 9986412--25689999718441342357887507865530045568995211275788879988640123346882667 Q gi|254780460|r 29 LPKPPML--MFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRA 106 (172) Q Consensus 29 LP~~p~l--miDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~ 106 (172) +..+||. |=-|+.++++ |+++.+..++++ |.-...++-|..+.-.+-.++++..... ....... T Consensus 17 ~~~~p~~~~lg~~~~~~~~-------~~~~~~~~~~~~------~~n~~g~vhGG~~~~l~D~a~g~~~~~~-~~~~~~~ 82 (149) T 1vh9_A 17 TSDNTMVAHLGIVYTRLGD-------DVLEAEMPVDTR------THQPFGLLHGGASAALAETLGSMAGFMM-TRDGQCV 82 (149) T ss_dssp TSTTSHHHHTTCEEEEECS-------SCEEEEEECSTT------TBCTTSSBCHHHHHHHHHHHHHHHHHTT-CCTTCCE T ss_pred HCCCHHHHHCCCEEEEEEC-------CEEEEEEECCHH------HCCCCCCCCCEEEEEEHHHHHHHHHHHH-CCCCCEE T ss_conf 4733188856959999969-------989999984999------9199982725014550557899999752-2466445 Q ss_pred EEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEE Q ss_conf 63045114102337985799999988963078579999999999-99999999710699 Q gi|254780460|r 107 VSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVC 164 (172) Q Consensus 107 ~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vg 164 (172) ..++..-|..++.+|+. ++.+.++ .+.++..++.+++++. ||+++++++-..+- T Consensus 83 ~~~~~~~~~~~~~~g~~-v~~~a~v---~~~g~~~~~v~~~~~~~~g~~va~a~~t~~~ 137 (149) T 1vh9_A 83 VGTELNATHHRPVSEGK-VRGVCQP---LHLGRQNQSWEIVVFDEQGRRCCTCRLGTAV 137 (149) T ss_dssp EEEEEEEEECSCCCSSE-EEEEEEE---EEECSSEEEEEEEEECTTSCEEEEEEEEEEE T ss_pred EEEEEEEEEECCCCCCE-EEEEEEE---EEECCCEEEEEEEEECCCCCEEEEEEEEEEE T ss_conf 52001113551368976-9999999---9807889999999990899899999899999 No 51 >>3e8p_A Uncharacterized protein; X-RAY Q8E9M7 SOR246 NESG structure, structural genomics, PSI-2, protein structure initiative; 2.30A {Shewanella oneidensis} (A:) Probab=91.19 E-value=1.1 Score=24.06 Aligned_cols=115 Identities=10% Similarity=0.079 Sum_probs=67.4 Q ss_pred CCCCCC--EEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCC--CCC-- Q ss_conf 998641--22568999971844134235788750786553004556899521127578887998864012334--688-- Q gi|254780460|r 29 LPKPPM--LMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLG--ELG-- 102 (172) Q Consensus 29 LP~~p~--lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~--~~~-- 102 (172) .+.+|| +|=-||++++++ +++.+..++++..-. +....+-|-.+.= ++...+.++.... ... T Consensus 28 ~~~~p~~~~lg~~i~~~~~~-------~~~~~~~~~~~~~n~----~~~G~vHGG~~~t-laD~~~g~~~~~~~~~~~~~ 95 (164) T 3e8p_A 28 DQHVPFHNLLGLDIKRYDID-------GVEVAINXKPELIGN----IHQQILHGGVTAT-VLDVVGGLTAFAGLVASRDD 95 (164) T ss_dssp HHSCHHHHHHTCEEEEESSS-------CEEEEEECCGGGEEE----TTTTEECHHHHHH-HHHHHHHHHHHHHHHTTCSC T ss_pred HHCCCHHHHCCCEEEEEECC-------EEEEEEECCHHHCCC----CCCCEEECCHHHH-HHHHHHHHHHHHHCCCCCCC T ss_conf 62588899789899999699-------899999858999088----9897573313156-78899999999744322233 Q ss_pred ---------CEEE-EEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEE Q ss_conf ---------2667-63045114102337985799999988963078579999999999-9999999971 Q gi|254780460|r 103 ---------KGRA-VSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQAND 160 (172) Q Consensus 103 ---------~~~~-~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~ 160 (172) ..+. ..--++.|.+++..+. ++.+. ++.+.++..++.+++++. ||+++++++- T Consensus 96 ~~~~~~~~~~~~~vt~~l~v~fl~p~~~~~--i~~~a---~~~~~gr~~~~v~~~i~~~~g~lva~~~~ 159 (164) T 3e8p_A 96 WTIEELQQRLQTLGTIDXRVDYLRPGRGQI--FTGTG---SVIRAGNRVSVCRXELHNEQGTHIAFGTG 159 (164) T ss_dssp CCHHHHHHHHHHCEEEEEEEEECSCCCCSE--EEEEE---EEEECCSSEEEEEEEEEETTCCEEEEEEE T ss_pred CCCCCCCCCCCCEEEEEEEEEEECCCCCCE--EEEEE---EEEECCCCEEEEEEEEEECCCCEEEEEEE T ss_conf 211112345651267787999863676756--99999---99985897999999999699999999999 No 52 >>2oiw_A Putative 4-hydroxybenzoyl-COA thioesterase; structural genomics, PSI-2, protein structure initiative; 2.00A {Geobacillus stearothermophilus} (A:) Probab=89.93 E-value=1.4 Score=23.39 Aligned_cols=107 Identities=9% Similarity=-0.051 Sum_probs=62.2 Q ss_pred EEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEEC Q ss_conf 87507865530045568995211275788879988640123346882667630451141023379857999999889630 Q gi|254780460|r 57 AEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILR 136 (172) Q Consensus 57 aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~ 136 (172) .+..|.+.+==+.||-.+ +...- .+-+|-...+.-+.......+.+....-.+++|++++.+||.+ +.+..+..+ T Consensus 7 ~~~~V~~~d~D~~g~v~~-~~y~~-~~~~ar~~~~~~~g~~~~~~~~~~~v~~~~i~y~~~~~~gd~i-~v~~~~~~~-- 81 (136) T 2oiw_A 7 TVITPRVSETDGVGHINN-TTVPV-WFEAGRHEIFKLFTPDLSFKRWRXVIIRXEVDYVNQXYYGQDV-TVYTGIERI-- 81 (136) T ss_dssp EEECCCGGGBCTTSSBCG-GGHHH-HHHHHTHHHHHHHSTTCCGGGCCEEEEEEEEEECSCCCTTSCE-EEEEEEEEE-- T ss_pred EEEEECHHHCCCCCCCCH-HHHHH-HHHHHHHHHHHCCCCCCHHCCCCEEEEEEEEEEEEECCCCCCC-CEEEEEEEC-- T ss_conf 988807257788883546-99999-9999987544034566000587358778998863412579763-146898861-- Q ss_pred CCCEEEEEEEEEEECCEEEEEEEEEEEEEECCC Q ss_conf 785799999999999999999971069986176 Q gi|254780460|r 137 GRVVLGAADGWVKVNGKEIYQANDLRVCLTIDR 169 (172) Q Consensus 137 ~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~de 169 (172) ++..+.....++.+|+++++++...|.+-.+. T Consensus 82 -~~~s~~~~~~i~~~g~~~a~~~~~~v~~d~~~ 113 (136) T 2oiw_A 82 -GNTSLTIYEEIHQNGVVCAKGRSVYVNFNFDT 113 (136) T ss_dssp -CSSEEEEEEEEEETTEEEEEEEEEEEEEETTT T ss_pred -CCEEEEEEEEECCCCEEEEEEEEEEEEEECCC T ss_conf -97499999999189879999999999998999 No 53 >>1y7u_A Acyl-COA hydrolase; structural genomics, coenzyme A, protein structure initiative, PSI, midwest center for structural genomics, MCSG; HET: COA; 2.80A {Bacillus cereus} (A:1-156) Probab=89.89 E-value=1.4 Score=23.37 Aligned_cols=103 Identities=12% Similarity=-0.037 Sum_probs=64.5 Q ss_pred EEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEE Q ss_conf 35788750786553004556899521127578887998864012334688266763045114102337985799999988 Q gi|254780460|r 53 GVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFK 132 (172) Q Consensus 53 G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik 132 (172) |.++....+.+. |--...++-|..+...+-.+++.. ...............++.|++++..|+ .++++.+ T Consensus 18 ~~~~~~~~~~~~------~~n~~G~vhGG~~~~l~d~a~~~~-~~~~~~~~~~~t~~~~i~f~~pv~~g~-~i~~~a~-- 87 (156) T 1y7u_A 18 SRVFKTSRVFPT------DLNDHNTLFGGKILSEXDXVASIS-ASRHSRKECVTASXDWVDFLHPVRSSD-CVSYESF-- 87 (156) T ss_dssp GCEEEEEECCGG------GBCTTSSBCHHHHHHHHHHHHHHH-HHHHHCSEEEEEEECCCCCCSCCCTTC-EEEEEEE-- T ss_pred CEEEEEEEECHH------HCCCCCCEEHHHHHHHHHHHHHHH-HHHHCCCCCEEEEEEEEEEEECCCCCC-EEEEEEE-- T ss_conf 648999997823------368788353899999999999999-999728996189982589850357895-7999999-- Q ss_pred EEECCCCEEEEEEEEEEE------CCEEEEEEEEEEEEEE Q ss_conf 963078579999999999------9999999971069986 Q gi|254780460|r 133 KILRGRVVLGAADGWVKV------NGKEIYQANDLRVCLT 166 (172) Q Consensus 133 ~v~~~~~~~~~~~g~~~v------dg~~i~~a~~l~vgl~ 166 (172) +.+.++..++.+++++. ++++++++..-.+.+- T Consensus 88 -v~~~g~~~~~v~~~i~~~d~~~~~~~~~a~a~~t~v~~~ 126 (156) T 1y7u_A 88 -VIWTGRTSXEVFVKVVSEYLISGEKRIAATSFVTFVALS 126 (156) T ss_dssp -EEEECSSEEEEEEEEEEECTTTCCEEEEEEEEEEEEEEC T ss_pred -EEECCCCEEEEEEEEEEEECCCCCEEEEEEEEEEEEEEC T ss_conf -701588228999999997077892899867799999987 No 54 >>2gf6_A Conserved hypothetical protein; 13815598, structural genomics, PSI, protein structure initiative, joint center for structural genomics; HET: COA; 1.91A {Sulfolobus solfataricus} (A:) Probab=88.24 E-value=1.8 Score=22.67 Aligned_cols=107 Identities=6% Similarity=-0.241 Sum_probs=60.7 Q ss_pred EEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH-CCC--CCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEE Q ss_conf 887507865530045568995211275788879988640-123--34688266763045114102337985799999988 Q gi|254780460|r 56 RAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFF-LGW--LGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFK 132 (172) Q Consensus 56 ~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~-~~~--~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik 132 (172) +.+..|.+.+==..||-.+ ..... .+-||....+.-+ ... ....+......-.+++|++++.+||. ++.+..+ T Consensus 8 ~~~~~V~~~d~D~~g~v~~-~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~vv~~~~i~y~~~~~~gd~-i~v~~~v- 83 (135) T 2gf6_A 8 VFEDVVRIYDTDAQGIAHY-AAYYR-FFTNTIEKFIKEKVGIPYPIVNENLWFVIAESHAIYHRPVKLGDK-LTVLLNP- 83 (135) T ss_dssp EEEEECCGGGBCTTSSBCH-HHHHH-HHHHHHHHHHHHHHCSCSSEEETTEEEEEEEEEEEECSCCCTTCE-EEEEEEE- T ss_pred EEEEEECHHHCCCCCCCCH-HHHHH-HHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEEEEEEEEEHHHCCH-HHEEEEE- T ss_conf 9998948888088881557-99999-999988999887406616666348614899873001131000310-1101232- Q ss_pred EEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEECC Q ss_conf 963078579999999999999999997106998617 Q gi|254780460|r 133 KILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTID 168 (172) Q Consensus 133 ~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~d 168 (172) ...++..+.....++.+|+++++++...+-+-.+ T Consensus 84 --~~~~~~~~~~~~~i~~~g~~~a~~~~~~v~~d~~ 117 (135) T 2gf6_A 84 --KILSNKTIKFEFKVLKDGELTTEGYVIQIAINPK 117 (135) T ss_dssp --EECSSSEEEEEEEEEETTEEEEEEEEEEEEEETT T ss_pred --CCCCCCEEEEEEEECCCCEEEEEEEEEEEEEECC T ss_conf --2467879999999714987999999999999999 No 55 >>3hrq_A PKS, aflatoxin biosynthesis polyketide synthase; hot-DOG fold, iterative type I PKS, norsolorinic acid, product template domain; HET: PLM; 1.80A {Aspergillus parasiticus} PDB: 3hrr_A* (A:) Probab=88.14 E-value=1.9 Score=22.63 Aligned_cols=117 Identities=12% Similarity=0.052 Sum_probs=60.4 Q ss_pred CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCC--CCC--EEE Q ss_conf 8641225689999718441342357887507865530045568995211275788879988640123346--882--667 Q gi|254780460|r 31 KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGE--LGK--GRA 106 (172) Q Consensus 31 ~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~--~~~--~~~ 106 (172) ++.|.-|.+|..-+. . ..++-.++.+......+|.-+ | -.++|+.|++.+++..... ... ..- T Consensus 199 g~~f~~i~~i~~~~~-~-------~~a~~~~~~~~~~~~~~~~~h---P--~llDa~lq~~~~~~~~~~~~~~~~~~~iP 265 (357) T 3hrq_A 199 NPDYMLLDYLVLNEA-E-------NEAASGVDFSLGSSEGTFAAH---P--AHVDAITQVAGFAMNANDNVDIEKQVYVN 265 (357) T ss_dssp CGGGCCEEEEEEEGG-G-------TEEEEEEEGGGSCCCSCCSSC---H--HHHHHHHHHHHHHHHTSTTCCTTTEEEEE T ss_pred CCCCCCCHHEEECCC-C-------EEEEEEECCCCCCCCCCCCCC---H--HHHHHHHHHHHHHHCCCCCCCCCCEEEEC T ss_conf 774445500487498-4-------389999648777777872348---3--57778998999985066666889807951 Q ss_pred EEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEE-ECCEEEEEEEEEEEE Q ss_conf 6304511410233798579999998896307857999999999-999999999710699 Q gi|254780460|r 107 VSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVK-VNGKEIYQANDLRVC 164 (172) Q Consensus 107 ~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~-vdg~~i~~a~~l~vg 164 (172) .+++++++.++..|+... .+.++ +.........+|..++ -+|+++++++++.+. T Consensus 266 ~~i~~i~i~~~~~~~~~~---~~~~~-~~~~~~~~~~~di~~~d~~G~~~~~i~g~~~~ 320 (357) T 3hrq_A 266 HGWDSFQIYQPLDNSKSY---QVYTK-MGQAKENDLVHGDVVVLDGEQIVAFFRGLTLR 320 (357) T ss_dssp EEEEEEEECSCCCTTCEE---EEEEE-CCCC--CCEEEEEEEEEETTEEEEEEEEEEEE T ss_pred CCCCCEEECCCCCCCCEE---EEEEE-EEECCCCCEEEEEEEEEECCCEEEEEEEEEEE T ss_conf 312517982578999679---99999-87358998899999998099499999148999 No 56 >>1vh5_A Hypothetical protein YDII; PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; 1.34A {Escherichia coli} (A:) Probab=87.89 E-value=1.9 Score=22.54 Aligned_cols=119 Identities=10% Similarity=-0.053 Sum_probs=68.1 Q ss_pred CCCCCCE--EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEE Q ss_conf 9986412--25689999718441342357887507865530045568995211275788879988640123346882667 Q gi|254780460|r 29 LPKPPML--MFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRA 106 (172) Q Consensus 29 LP~~p~l--miDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~ 106 (172) ++.+||. |=-++.+++++ +++....+.++ +.. ....+-|-.+.-.+-.++++... ......... T Consensus 17 ~~~~p~~~~lg~~~~~~~~~-------~~~~~~~~~~~--~~n----~~g~vhGG~l~~l~D~~~~~~~~-~~~~~~~~~ 82 (148) T 1vh5_A 17 MGEGNMVGFLDIRFEHIGDD-------TLEATMPVDSR--TKQ----PFGLLHGGASVVLAESIGSVAGY-LCTEGEQKV 82 (148) T ss_dssp TTTTSHHHHTTCEEEEECSS-------CEEEEEECSTT--TBC----TTSSBCHHHHHHHHHHHHHHHHH-HTSCTTCEE T ss_pred HCCCCHHHHCCCEEEEEECC-------EEEEEEEECHH--HCC----CCCEEEHHHHHHHHHHHHHHEHH-HHCCCCEEE T ss_conf 37350888629899999699-------89999992999--929----99826227877676644422312-233573045 Q ss_pred EEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEE Q ss_conf 63045114102337985799999988963078579999999999-999999997106998 Q gi|254780460|r 107 VSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCL 165 (172) Q Consensus 107 ~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl 165 (172) ..++..-|..++.+|+. ++.+.++. +.++..++.+++++. ||+++++++-..+.+ T Consensus 83 ~t~~~~~~~~~~~~g~~-v~~~a~v~---~~g~~~~~~~~~i~~~~g~~~a~~~~t~~~~ 138 (148) T 1vh5_A 83 VGLEINANHVRSAREGR-VRGVCKPL---HLGSRHQVWQIEIFDEKGRLCCSSRLTTAIL 138 (148) T ss_dssp EEEEEEEEECSCCCSSE-EEEEEEEE---EECSSEEEEEEEEECTTSCEEEEEEEEEEEE T ss_pred EEEEEEEEEECCCCCCC-CEEEEEEE---ECCCCEEEEEEEEEECCCCEEEEEEEEEEEE T ss_conf 76666898851677875-23789999---8589899999999928998999997999998 No 57 >>1t82_A Hypothetical acetyltransferase; structural genomics, alpha-beta dimeric protein with A fold resembling A hotdog, PSI; 1.70A {Shewanella oneidensis mr-1} (A:) Probab=87.72 E-value=2 Score=22.48 Aligned_cols=110 Identities=12% Similarity=0.007 Sum_probs=63.4 Q ss_pred EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCC---CCCCCCEEEEEECCCEEE Q ss_conf 89999718441342357887507865530045568995211275788879988640123---346882667630451141 Q gi|254780460|r 39 RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGW---LGELGKGRAVSVSNIKFR 115 (172) Q Consensus 39 rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~---~~~~~~~~~~~~~~vkfr 115 (172) ++++++++ +++.+..+++ +.- ..+++=|-.+.=.+--++++.+.. ...........--++.|. T Consensus 35 ~i~~~~~g-------~~~~~~~~~~--~~n-----~~g~vHGG~~a~l~D~~~g~~~~~~~~~~~~~~~~vt~~l~v~yl 100 (155) T 1t82_A 35 APLSFTDG-------ELSVSAPLAP--NIN-----LHHTXFAGSIYTIXTLTGWGXVWLQQQLLNVDGDIVLADAHIRYL 100 (155) T ss_dssp EEEEEETT-------EEEEECCSGG--GBC-----TTSSBCHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEEEEEC T ss_pred EEEEECCC-------EEEEEECCHH--HCC-----CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEE T ss_conf 99996298-------7999973554--157-----999711445566676767999999887557897368475778885 Q ss_pred EEECCCCCEEEEEEEEE-----EEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEE Q ss_conf 02337985799999988-----9630785799999999999999999971069986 Q gi|254780460|r 116 GMVTPDCKLVEYGIDFK-----KILRGRVVLGAADGWVKVNGKEIYQANDLRVCLT 166 (172) Q Consensus 116 ~~V~Pgd~~i~~~i~ik-----~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~ 166 (172) +++..++. + +.++. ++.+.++.+.+.+++++.||+++++++-. ..+. T Consensus 101 rpa~~~~~-~--~a~~~~~~~~~~~~~gr~~~~~~~~i~d~g~lvA~a~~t-~~v~ 152 (155) T 1t82_A 101 APVTSAPE-V--KVRWPDTNLSPLQRGRKAKVKLEVQLFCDGKLCAQFDGL-YVSV 152 (155) T ss_dssp SCCCSCCE-E--EEECCSCCCGGGGGTCCEEEEEEEEEEETTEEEEEEEEE-EEEE T ss_pred CCCCCCCE-E--EEEECHHHHHHHCCCCEEEEEEEEEEEECCEEEEEEEEE-EEEE T ss_conf 13566748-9--999623544343138658999999999999999999999-9994 No 58 >>1z54_A Probable thioesterase; hypothetical protein, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus HB8} (A:) Probab=87.71 E-value=2 Score=22.48 Aligned_cols=66 Identities=15% Similarity=0.039 Sum_probs=46.5 Q ss_pred CCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEECCC Q ss_conf 6882667630451141023379857999999889630785799999999999999999971069986176 Q gi|254780460|r 100 ELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTIDR 169 (172) Q Consensus 100 ~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~de 169 (172) ..+......-.++.|++++.+||. ++.+..+.++ +...+....+++.+|+++++++-..+-+-+.+ T Consensus 49 ~~~~~~~v~~~~i~y~~~~~~~d~-i~v~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~v~~d~~k 114 (132) T 1z54_A 49 ARGVFFPVVELGLTFRAPARFGEV-VEVRTRLAEL---SSRALLFRYRVEREGVLLAEGFTRHLCQVGER 114 (132) T ss_dssp TTTEECCEEEEEEEECSCCCTTCE-EEEEEEEEEE---CSSEEEEEEEEEETTEEEEEEEEEEECEESSS T ss_pred HCCCCEEEEEEEEEEECCCCCCCE-EEEEEEEEEC---CCEEEEEEEEEEECCEEEEEEEEEEEEEECCC T ss_conf 469615999999986100688868-9998999881---97899999999989999999999999930997 No 59 >>3bnv_A CJ0977; virulence factor, hot-DOG fold, flagella, unknown function; HET: MSE; 2.60A {Campylobacter jejuni} (A:) Probab=87.09 E-value=2.2 Score=22.26 Aligned_cols=118 Identities=12% Similarity=0.026 Sum_probs=70.9 Q ss_pred CCCCCCE--EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEE Q ss_conf 9986412--25689999718441342357887507865530045568995211275788879988640123346882667 Q gi|254780460|r 29 LPKPPML--MFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRA 106 (172) Q Consensus 29 LP~~p~l--miDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~ 106 (172) ...+|+. +=.++++++++ +++.+..+.++ .|.....++-|..+.-.+-.++++.+. ..... T Consensus 26 ~~~~~~~~~~g~~i~~~~~g-------~~~~~~~~~~~-----~~~n~~g~~hGG~i~~l~D~~~~~a~~-----~~~~v 88 (152) T 3bnv_A 26 LTCPELNTSLAGTIIEIDKN-------YAKSILITTSE-----XVADDQGLIFDAFIFAAANYVAQASIN-----KEFSV 88 (152) T ss_dssp CSSTTCCHHHHCEEEEEETT-------EEEEEEECCGG-----GBSSTTCBBCHHHHHHHHHHHHHHHHC-----CSSEE T ss_pred HCCCCHHHHHCEEEEEEECC-------EEEEEEEECHH-----HCCCCCCEEECHHHHHHHHHHHHHHHC-----CCCEE T ss_conf 44830456517599999799-------99999996789-----920889707701756899999987616-----88589 Q ss_pred EEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEE-EECCEEEEEEEEEEEEEECC Q ss_conf 630451141023379857999999889630785799999999-99999999997106998617 Q gi|254780460|r 107 VSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWV-KVNGKEIYQANDLRVCLTID 168 (172) Q Consensus 107 ~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~-~vdg~~i~~a~~l~vgl~~d 168 (172) ....+++|++++.+|+. ++.+.+ +.+.++..++..+.+ ..+|+++++++-- ...... T Consensus 89 t~~l~i~f~~p~~~g~~-l~~~a~---v~~~g~~~~~~~~~~~~~~~~l~a~a~~t-~~~~~~ 146 (152) T 3bnv_A 89 IIGSKCFFYAPLKLGDV-LELEAH---ALFDETSKKRDVKVVGHVKEIKXFEGTIQ-VVSTDE 146 (152) T ss_dssp EEEEEEEECSCCBTTCE-EEEEEE---ECCCSSCSEEEEEEEEEETTEEEEEEEEE-EEECSS T ss_pred EEEEEEEEEEEECCCCE-EEEEEE---EEEECCCEEEEEEEEEEECCEEEEEEEEE-EEEECC T ss_conf 97724458883059997-999999---99988977999999991099999999999-999586 No 60 >>2egj_A Hypothetical protein AQ_1494; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.80A {Aquifex aeolicus} PDB: 2egi_A 2egr_A (A:) Probab=86.75 E-value=2.2 Score=22.15 Aligned_cols=105 Identities=7% Similarity=-0.142 Sum_probs=63.0 Q ss_pred EEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCC---CCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEE Q ss_conf 750786553004556899521127578887998864012---33468826676304511410233798579999998896 Q gi|254780460|r 58 EMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLG---WLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKI 134 (172) Q Consensus 58 ek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~---~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v 134 (172) +..|.+.+==..||-.+ .... .++-+|-...+.-+.. .....+......-..++|++++.+||. ++.+..+.++ T Consensus 6 ~~~V~~~d~D~~g~~~~-~~y~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~y~~~~~~gd~-i~v~t~v~~~ 82 (128) T 2egj_A 6 RRRVQFYETDAQGIVHH-SNYF-RYFEEARGEFLRSKGFPYSKMRDMGLEVVLLNAYCEYKKPLFYDDV-FEVHLNLEEL 82 (128) T ss_dssp EEECCGGGBCTTSSBCT-HHHH-HHHHHHHHHHHHHTTCCHHHHHHTTEEEEEEEEEEEECSCCCTTCE-EEEEEEEEEE T ss_pred EEEECHHHCCCCCEECH-HHHH-HHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEEEEEECCCCCCCCC-EEEEEEEEEE T ss_conf 99989899588876668-9999-9999998866653372113366469629999976487342557982-6999999996 Q ss_pred ECCCCEEEEEEEEEEECCEEEEEEEEEEEEEECC Q ss_conf 3078579999999999999999997106998617 Q gi|254780460|r 135 LRGRVVLGAADGWVKVNGKEIYQANDLRVCLTID 168 (172) Q Consensus 135 ~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~d 168 (172) +.........++.+|+++++++-..+-+-+. T Consensus 83 ---~~~~~~~~~~i~~~g~~~~~~~~~~v~~d~~ 113 (128) T 2egj_A 83 ---SRFTFTFSYIVFKEDIAVAKANTKHCMVKNG 113 (128) T ss_dssp ---CSSEEEEEEEEEETTEEEEEEEEEEEEEETT T ss_pred ---CCEEEEEEEEEEECCEEEEEEEEEEEEECCC T ss_conf ---9989999999999999999999999998899 No 61 >>3d6l_A Putative hydrolase; hot DOG fold, thioesterase, acyl-COA; 2.59A {Campylobacter jejuni} (A:1-120) Probab=85.52 E-value=2.6 Score=21.77 Aligned_cols=100 Identities=9% Similarity=-0.103 Sum_probs=60.8 Q ss_pred EEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEE Q ss_conf 78875078655300455689952112757888799886401233468826676304511410233798579999998896 Q gi|254780460|r 55 VRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKI 134 (172) Q Consensus 55 i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v 134 (172) ++....+.++ +. -...++-|-.+...+-.+++..+ ..............+++|++++.+|+. ++.+.++. T Consensus 7 ~~~~~~v~~~--~~----n~~g~vhGG~i~~l~D~~~~~a~-~~~~~~~~~~t~~~~i~f~~p~~~g~~-i~~~a~v~-- 76 (120) T 3d6l_A 7 PKLKIVAMPS--DT----NPAGNIFGGWILSQIDLAGAIAA-RELSPERVVTISMDKVVFKEPVFIGDI-ISCYSKVV-- 76 (120) T ss_dssp CSEEEECCGG--GB----CTTSSBCHHHHHHHHHHHHHHHH-HTSSSSEEEEEEEEEEECCSCCCTTCE-EEEEEEEE-- T ss_pred CEEEEECCHH--HC----CCCCEEEHHHHHHHHHHHHHHHH-HHHCCCCCCEEEEEEEEEEECCCCCCE-EEEEEEEE-- T ss_conf 1899980766--76----88975968999999999851556-865589861899836898612466638-99999999-- Q ss_pred ECCCCEEEEEEEEEEECC---------EEEEEEEEEEEEE Q ss_conf 307857999999999999---------9999997106998 Q gi|254780460|r 135 LRGRVVLGAADGWVKVNG---------KEIYQANDLRVCL 165 (172) Q Consensus 135 ~~~~~~~~~~~g~~~vdg---------~~i~~a~~l~vgl 165 (172) +.++..++.+++++.++ .+++++.-..+.+ T Consensus 77 -~~gr~~~~v~~~v~~~d~~~~~~~~~~~v~~a~~t~v~~ 115 (120) T 3d6l_A 77 -NVGNTSISVEVEVTAQRVDSQGCTSCINVTSALVTYVSV 115 (120) T ss_dssp -EECSSEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEE T ss_pred -EECCCEEEEEEEEEEEECCCCCCCEEEEEEEEEEEEEEE T ss_conf -944734999999999722568861799999999999998 No 62 >>2cye_A Conserved hypothetical protein, TTHA1846; structural genomics, esterase, NPPSFA; HET: COA; 1.90A {Thermus thermophilus} (A:) Probab=85.07 E-value=2.7 Score=21.65 Aligned_cols=105 Identities=13% Similarity=-0.082 Sum_probs=59.2 Q ss_pred EEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEE Q ss_conf 88750786553004556899521127578887998864012334688266763045114102337985799999988963 Q gi|254780460|r 56 RAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKIL 135 (172) Q Consensus 56 ~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~ 135 (172) +.+..|.+.+==+.||-.+ +. --.++-+|-.+.+.-+ ......+......-.+++|++++.+||. ++.+..+.++ T Consensus 7 ~~~~~V~~~d~D~~g~v~~-~~-y~~~~~~a~~~~~~~~-g~~~~~~~~~v~~~~~~~f~~~~~~gd~-i~v~~~v~~~- 81 (133) T 2cye_A 7 RVRVDVRFRDLDPLGHVNN-AV-FLSYXELARIRYFQRI-SPDWLEEGHFVVARXEVDYLRPILLGDE-VFVGVRTVGL- 81 (133) T ss_dssp EEEEECCGGGBCTTSBBCH-HH-HHHHHHHHHHHHHTTC---CGGGGGGEEEEEEEEEECSCCBTTCE-EEEEEEEEEE- T ss_pred EEEEEECHHHCCCCCEECH-HH-HHHHHHHHHHHHHHHC-CCCCCCCCCEEEEEEEEEECCCCCCCCE-EEEEEEEEEE- T ss_conf 9998707778786780114-89-8899887788777653-9750037747889999794727745610-1799999993- Q ss_pred CCCCEEEEEEEEEEECCEEEEEEEEEEEEEEC Q ss_conf 07857999999999999999999710699861 Q gi|254780460|r 136 RGRVVLGAADGWVKVNGKEIYQANDLRVCLTI 167 (172) Q Consensus 136 ~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~ 167 (172) +.........++.+|+++++++-..+-+-+ T Consensus 82 --~~~~~~~~~~i~~~g~~~a~~~~~~v~~d~ 111 (133) T 2cye_A 82 --GRSSLRXEHLVTANGESAAKGLGVLVWLEG 111 (133) T ss_dssp --CSSEEEEEEEEEETTEEEEEEEEEEEEEET T ss_pred --CCEEEEEEEEEEECCEEEEEEEEEEEEECC T ss_conf --998999999999899999999999999729 No 63 >>1s5u_A Protein YBGC; structural genomics, hypothetical protein, thioesterase fold, PSI, protein structure initiative; 1.70A {Escherichia coli} (A:1-125) Probab=84.55 E-value=2.9 Score=21.50 Aligned_cols=109 Identities=10% Similarity=-0.061 Sum_probs=60.5 Q ss_pred EEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH---CCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEE Q ss_conf 7887507865530045568995211275788879988640---1233468826676304511410233798579999998 Q gi|254780460|r 55 VRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFF---LGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDF 131 (172) Q Consensus 55 i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~---~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~i 131 (172) .+.+..|.+.|==..||-.+ ....- ++-||-...+.-+ .......+......-..++|++++.+||. ++.+..+ T Consensus 8 ~~~~~~v~~~d~D~~g~v~~-~~y~~-~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~f~~~~~~gd~-i~v~~~~ 84 (125) T 1s5u_A 8 FRWPVRVYYEDTDAGGVVYH-ASYVA-FYERARTEMLRHHHFSQQALMAERVAFVVRKMTVEYYAPARLDDM-LEIQTEI 84 (125) T ss_dssp EEEEEECCGGGBCTTSSBCH-HHHHH-HHHHHHHHHHHHTTCCHHHHHHTTCEEEEEEEEEEECSCCCTTCE-EEEEEEE T ss_pred EEEEEEECHHHCCCCCCCCH-HHHHH-HHHHHEECHHHCCCCHHHHHHHCCCEEEEEEEEEEEEHHHCCCCE-EEEEEEE T ss_conf 89889989999389985378-99988-888657001120464044575478059998640012033126842-7889999 Q ss_pred EEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEEECCC Q ss_conf 8963078579999999999-9999999971069986176 Q gi|254780460|r 132 KKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCLTIDR 169 (172) Q Consensus 132 k~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl~~de 169 (172) .++ +.........++. +|+++++++-..+.+-.+. T Consensus 85 ~~~---~~~~~~~~~~i~~~~g~~~a~~~~~~v~~d~~~ 120 (125) T 1s5u_A 85 TSM---RGTSLVFTQRIVNAENTLLNEAEVLVVCVDPLK 120 (125) T ss_dssp EEE---CSSEEEEEEEEECTTCCEEEEEEEEEEEEETTT T ss_pred EEC---CCEEEEEEEEEEECCCEEEEEEEEEEEEEECCC T ss_conf 875---975999999999258379999999999999999 No 64 >>2qq2_A Cytosolic acyl coenzyme A thioester hydrolase; ACOT7, C-terminal domain, thioesterase, structural genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} (A:) Probab=83.14 E-value=3.3 Score=21.15 Aligned_cols=92 Identities=10% Similarity=0.040 Sum_probs=51.9 Q ss_pred CCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEE Q ss_conf 34235788750786553004556899521127578887998864012334688266763045114102337985799999 Q gi|254780460|r 50 YNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGI 129 (172) Q Consensus 50 ~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i 129 (172) ...|+++....+.++. .. ...++=|-.+...+-.+++ ++...............++.|+++|..|+ .++++. T Consensus 38 ~~~~~~~~~~~v~~~~--~n----~~G~v~GG~l~~l~D~~~~-~a~~~~~~~~~~~t~~~~i~f~~pv~~g~-~i~~~a 109 (193) T 2qq2_A 38 VSYSQSSLIHLVGPSD--CT----LHGFVHGGVTMKLMDEVAG-IVAARHCKTNIVTASVDAINFHDKIRKGC-VITISG 109 (193) T ss_dssp HHHHCEEEEEECCGGG--BC----SSSBBCHHHHHHHHHHHHH-HHHHHHHSSEEEEEEEEEEEECSCCBTTE-EEEEEE T ss_pred CCCCCEEEEEEECCCC--CC----CCCCCHHHHHHHHHHHHHH-HHHHHHHCCCCEEEEEEEEEEEECCCCCC-EEEEEE T ss_conf 6615056467887010--49----8984908999999999999-99999859996279970599974135672-699999 Q ss_pred EEEEEECCCCEEEEEEEEEEECC Q ss_conf 98896307857999999999999 Q gi|254780460|r 130 DFKKILRGRVVLGAADGWVKVNG 152 (172) Q Consensus 130 ~ik~v~~~~~~~~~~~g~~~vdg 152 (172) ++.++ ++..++.++.++..+ T Consensus 110 ~v~~~---gr~~~~~~~~v~~~~ 129 (193) T 2qq2_A 110 RMTFT---SNKSMEIEVLVDADP 129 (193) T ss_dssp EEEEE---CSSEEEEEEEEEEEE T ss_pred EEEEC---CCCCEEEEEEEEEEC T ss_conf 99861---775447888999960 No 65 >>3bjk_A Acyl-COA thioester hydrolase HI0827; hotdog fold, trimer of dimers, YCIA, structural genomics, structure 2 function project, S2F; HET: CIT; 1.90A {Haemophilus influenzae rd KW20} PDB: 1yli_A* (A:) Probab=82.74 E-value=3.4 Score=21.06 Aligned_cols=105 Identities=15% Similarity=-0.065 Sum_probs=60.8 Q ss_pred CCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEE Q ss_conf 34235788750786553004556899521127578887998864012334688266763045114102337985799999 Q gi|254780460|r 50 YNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGI 129 (172) Q Consensus 50 ~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i 129 (172) .+.++++.+..+.+++==- ..++=|..++.-+-.+ ...+................+.|++++.+||. ++.+. T Consensus 11 ~~~~~~~~~~~v~~~~~d~------~G~v~gg~~~~~~d~~-~~~~~~~~~~~~~~~~~~~~i~f~~pv~~gd~-v~~~~ 82 (153) T 3bjk_A 11 QSKGVLLLRTLAMPSDTNA------NGDIFGGWIMSQMAMG-GAILAKEIAHGRVVTVAVESMNFIKPISVGDV-VCCYG 82 (153) T ss_dssp -CCSEEEEEEECCGGGBCT------TSSBCHHHHHHHHHHH-HHHHHHHHHTSCEEEEEEEEEEECSCCCTTCE-EEEEE T ss_pred CCCCEEEEEEEECCCCCCC------CCCCHHHHHHHHHHHH-HHHHHHHHCCCCCCEEEEEEEEEEECCCCCEE-EEEEE T ss_conf 9976899999816523587------8818089999999999-99999997299973799736899511466539-99999 Q ss_pred EEEEEECCCCEEEEEEEEEEEC---------CEEEEEEEEEEEEE Q ss_conf 9889630785799999999999---------99999997106998 Q gi|254780460|r 130 DFKKILRGRVVLGAADGWVKVN---------GKEIYQANDLRVCL 165 (172) Q Consensus 130 ~ik~v~~~~~~~~~~~g~~~vd---------g~~i~~a~~l~vgl 165 (172) ++.++ ++..+..+.+++.+ +.++++++-..+.+ T Consensus 83 ~v~~~---g~~~~~~~~~i~~~~~~~~~~~~~~~v~~a~~~~v~~ 124 (153) T 3bjk_A 83 QCLKV---GRSSIKIKVEVWVKKVASEPIGERYCVTDAVFTFVAV 124 (153) T ss_dssp EEEEE---CSSEEEEEEEEEEECSSSSSTTCEEEEEEEEEEEEEB T ss_pred EEEEC---CCEEEEEEEEEEEECCCCCCCCEEEEEEEEEEEEEEE T ss_conf 99881---4277999999999625667778599999999999998 No 66 >>2w3x_A CALE7; hydrolase, hotdog fold, thioesterase, enediyne biosynthesis; HET: JEF; 1.75A {Micromonospora echinospora} (A:) Probab=79.59 E-value=4.4 Score=20.39 Aligned_cols=108 Identities=3% Similarity=-0.214 Sum_probs=60.1 Q ss_pred EEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHH---HHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEE Q ss_conf 7887507865530045568995211275788879988---6401233468826676304511410233798579999998 Q gi|254780460|r 55 VRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLT---GFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDF 131 (172) Q Consensus 55 i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~---~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~i 131 (172) .+.+..|.+.+==..||-.+ +...- .+-+|-.+.+ +.........+.........++|++++.+||. ++.+..+ T Consensus 7 ~~~~~~V~~~d~D~~g~v~~-~~y~~-~~~~~r~~~~~~~g~~~~~~~~~~~~~~v~~~~i~y~~~v~~gd~-i~v~~~v 83 (147) T 2w3x_A 7 YEYRHVVGFEETNLVGNVYY-VNYLR-WQGRCREMFLYEHAPEILDELRADLKLFTLKAECEFFAELAPFDR-LAVRMRL 83 (147) T ss_dssp EEEEEECCGGGBCTTSSBCT-HHHHH-HHHHHHHHHHHHHCTHHHHHHTTTEEEEEEEEEEEECSCCCTTCE-EEEEEEE T ss_pred EEEEEEECHHHCCCCCCCCH-HHHHH-HHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHEEEEECCCCCCCCC-EEEEEEE T ss_conf 79989978899489894458-99999-999999999876223378885268620543100112023457851-3899999 Q ss_pred EEEECCCCEEEEEEEEEEE---CCEEEEEEEEEEEEEECC Q ss_conf 8963078579999999999---999999997106998617 Q gi|254780460|r 132 KKILRGRVVLGAADGWVKV---NGKEIYQANDLRVCLTID 168 (172) Q Consensus 132 k~v~~~~~~~~~~~g~~~v---dg~~i~~a~~l~vgl~~d 168 (172) ..+.+. .+ ...-.++. +|+++++++-..+-+-.+ T Consensus 84 ~~~~~~--s~-~~~~~i~~~~~~g~~~a~~~~~~v~~d~~ 120 (147) T 2w3x_A 84 VELTQT--QM-ELGFDYLRLGGDDLLVARGRQRIACMRGP 120 (147) T ss_dssp EEECSS--EE-EEEEEEEEESSSEEEEEEEEEEEEEEESS T ss_pred EECCCC--EE-EEEEEEEECCCCCCEEEEEEEEEEEEECC T ss_conf 981894--89-99999996289970899899999999888 No 67 >>3dkz_A Thioesterase superfamily protein; Q7W9W5, borpa, PF03061, NESG, BPR208C, structural genomics, PSI-2, protein structure initiative; 2.40A {Bordetella parapertussis} (A:) Probab=78.26 E-value=4.9 Score=20.15 Aligned_cols=115 Identities=11% Similarity=0.044 Sum_probs=67.7 Q ss_pred CCCCE-EE-EEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEE Q ss_conf 86412-25-68999971844134235788750786553004556899521127578887998864012334688266763 Q gi|254780460|r 31 KPPML-MF-HRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVS 108 (172) Q Consensus 31 ~~p~l-mi-DrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~ 108 (172) .+||. ++ =++.+++++ .++.+..+.++ ... | ...+=|-.+. +++..++.++............. T Consensus 12 ~~p~~~~~g~~~~~~~~~-------~~~~~~~~~~~--~~n-~---~g~vhGG~~~-~l~D~~~~~~~~~~~~~~~~~t~ 77 (142) T 3dkz_A 12 TIPFXQLLGVVPEHSGNG-------TARTRLPARAD--LVN-S---RGDIHGGTLX-SVLDFTLGAAIRGDTPEVGVATI 77 (142) T ss_dssp BCHHHHHHTCEEEEEETT-------EEEEEECCCST--TBC-S---SSSBCHHHHH-HHHHHHHHHTTTTSCTTSCEEEE T ss_pred CCCHHHHCCCEEEEEECC-------EEEEEEECCHH--HCC-C---CCCEECEEEE-EECCHHHHHHHHHCCCCCCCCCC T ss_conf 679899759899999799-------99999997899--909-9---9958652444-32230245566640875553043 Q ss_pred ECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEE Q ss_conf 045114102337985799999988963078579999999999-999999997106998 Q gi|254780460|r 109 VSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCL 165 (172) Q Consensus 109 ~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl 165 (172) ..++.|.+++.-++ + .+.++. +.++..++++++++. ||+++++++-..+.+ T Consensus 78 ~l~i~f~~pv~~~~-~--~~a~v~---~~g~~~~~~~~~i~~~~g~~~a~~~~t~~~~ 129 (142) T 3dkz_A 78 DXNTSFXSPGRGDL-V--IETRCL---RRGASIAFCEGEIRDSAGELVAKATATFKII 129 (142) T ss_dssp EEEEEECSCCCSCE-E--EEEEEE---EECSSEEEEEEEEEETTCCEEEEEEEEEEEC T ss_pred EEEEEEECCCCCCE-E--EEEEEE---EECCCEEEEEEEEEECCCCEEEEEEEEEEEE T ss_conf 30798724887879-9--999999---9698799999999989998999999999996 No 68 >>3el6_A Erythromycin dehydratase; dehydratase double hotdog fold CIS-proline, acyltransferase, antibiotic biosynthesis; 1.85A {Saccharopolyspora erythraea} (A:) Probab=76.27 E-value=5.6 Score=19.81 Aligned_cols=53 Identities=9% Similarity=0.122 Sum_probs=31.1 Q ss_pred CEEEEEEEEEECCCCCCCCEEEEEEEECCCC-CCCCCCC-CCCCCEEEHHHHHHHHHHHHH Q ss_conf 1225689999718441342357887507865-5300455-689952112757888799886 Q gi|254780460|r 34 MLMFHRITQISETGGNYNQGVVRAEMDITPN-LWFFDCH-FKNDPVMPGCLGLDALWQLTG 92 (172) Q Consensus 34 ~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d-~wff~gH-Fp~~PvmPGvL~iEa~~Ql~~ 92 (172) --++++...-.+.. .+..+..++.+ .+|..+| .-+.||+||+..+|.+++++. T Consensus 37 ~~ll~~~~~~~~~~------~~~~~~~l~~~~~~~l~dH~v~g~~v~P~~~~ie~a~~a~~ 91 (313) T 3el6_A 37 HPLLLAAVDVPGHG------GAVFTGRLSTDEQPWLAEHVVGGRTLVPGSVLVDLALAAGE 91 (313) T ss_dssp STTEEEEEECTTTS------CEEEEEEECTTTCGGGGGEEETTEEBCCHHHHHHHHHHHHH T ss_pred CCCCCCCCCCCCCC------CEEEEEEECCCCCCCCCCCEECCEEECCHHHHHHHHHHHHH T ss_conf 98678704568999------46999997887686203567899982468999999999999 No 69 >>2hx5_A Hypothetical protein; NP_895880.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.50A {Prochlorococcus marinus str} (A:) Probab=76.26 E-value=5.6 Score=19.81 Aligned_cols=65 Identities=5% Similarity=-0.064 Sum_probs=45.5 Q ss_pred CCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEECCC Q ss_conf 882667630451141023379857999999889630785799999999999999999971069986176 Q gi|254780460|r 101 LGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTIDR 169 (172) Q Consensus 101 ~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~de 169 (172) .+.+....-..+.|++++.++|. ++.+..+.++ +.......-.++.+|++++++....|.+-.+. T Consensus 63 ~~~~~~v~~~~~~y~~~i~~~d~-i~v~t~v~~~---~~~s~~~~~~i~~~g~~~a~~~~~~v~~d~~~ 127 (152) T 2hx5_A 63 PEVALPIIHCQADFRRPIHTGDA-LAXELRPERL---NPNSFQVHFEFRCEEQIAAHALIRHLAINAQT 127 (152) T ss_dssp CSEECCEEEEEEEECSCCCTTCE-EEEEEEEEEE---ETTEEEEEEEEEETTEEEEEEEEEEECEETTT T ss_pred CCEEEEEEEEEEEECCCCCCCCE-EEEEEEEEEC---CCEEEEEEEEEEECCEEEEEEEEEEEEEECCC T ss_conf 76368999999999045548850-5899999856---97099999999958957999999999998999 No 70 >>2v1o_A Cytosolic acyl coenzyme A thioester hydrolase; alternative splicing, acyl-COA thioesterase 7, serine esterase, protein structure, domain duplication; HET: COA; 1.78A {Mus musculus} (A:) Probab=76.23 E-value=5.6 Score=19.80 Aligned_cols=64 Identities=11% Similarity=-0.063 Sum_probs=43.0 Q ss_pred CCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE------CCEEEEEEEEEEEEEECCC Q ss_conf 8266763045114102337985799999988963078579999999999------9999999971069986176 Q gi|254780460|r 102 GKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV------NGKEIYQANDLRVCLTIDR 169 (172) Q Consensus 102 ~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v------dg~~i~~a~~l~vgl~~de 169 (172) .........++.|++++..||. ++.+..|.++. .........++. +|++++++..-.|.+..|+ T Consensus 46 ~~~~~~~~~~i~f~~pv~~gd~-i~i~~~v~~~g---~~s~~~~~~i~~~~~~~~~~~~~~~a~~t~V~~~~~~ 115 (151) T 2v1o_A 46 CVAALARVERTDFLSPMCIGEV-AHVSAEITYTS---KHSVEVQVHVMSENILTGTKKLTNKATLWYVPLSLKN 115 (151) T ss_dssp EEEEEEEECCEECCSCCBTTCE-EEEEEEEEEEC---SSCEEEEEEEEEECTTTCCEEEEEEEEEEEEEEESSS T ss_pred CEEEEEEEEEEEEEECCCCCCE-EEEEEEEEECC---CCEEEEEEEEEEECCCCCCEEEEEEEEEEEEEEEECC T ss_conf 2699999879999850364418-99999998548---6248999999996278996999999999999998479 No 71 >>2gvh_A AGR_L_2016P; 15159470, acyl-COA hydrolase, structural genomics, joint center for structural genomics, JCSG; 2.50A {Agrobacterium tumefaciens str} (A:1-155) Probab=75.56 E-value=5.8 Score=19.70 Aligned_cols=101 Identities=14% Similarity=-0.045 Sum_probs=53.2 Q ss_pred EEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEE Q ss_conf 57887507865530045568995211275788879988640123346882667630451141023379857999999889 Q gi|254780460|r 54 VVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKK 133 (172) Q Consensus 54 ~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~ 133 (172) .++.+..+.+.+--..||-.+ -.++. ++..++.++...............++.|++++..|+ .++++.++.+ T Consensus 28 ~~~~~~~v~~~~~n~~g~v~g------G~~~~-~~D~~~~~~~~~~~~~~~~~~~~~~i~f~~pv~~g~-~i~~~~~v~~ 99 (155) T 2gvh_A 28 TTRLIDIVFPGDTNHHGTLFG------GTGLA-LXDRVAFIAATRFGRTPFVTASCERIDFRQPARIGH-IVEFTARPVK 99 (155) T ss_dssp CEEEEEEECTTCHHHHHHHTT------HHHHH-HHHHHHHHHHHHHHCSCEEEEEECCEECCCCCSSCE-EEEEEEEEEE T ss_pred EEEEEEEECHHHCCCCCCCHH------HHHHH-HHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCC-EEEEEEEEEE T ss_conf 269999988678698986949------99999-999999999998479965999984079867888996-7898899998 Q ss_pred EECCCCEEEEEEEEEEEC------CEEEEEEEEEEEEE Q ss_conf 630785799999999999------99999997106998 Q gi|254780460|r 134 ILRGRVVLGAADGWVKVN------GKEIYQANDLRVCL 165 (172) Q Consensus 134 v~~~~~~~~~~~g~~~vd------g~~i~~a~~l~vgl 165 (172) + ++..+..++.++.. ++++++++-..+-+ T Consensus 100 ~---g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v~i 134 (155) T 2gvh_A 100 A---GRRSLTVEVEXVAETIIGRQQHTCTRGIFHXVAI 134 (155) T ss_dssp E---CSSEEEEEEEEEEEETTTCCEEEEEEEEEEEEEC T ss_pred C---CCCEEEEEEEEEEEECCCCCEEEEEEEEEEEEEE T ss_conf 2---8718999999999817899299999999999999 No 72 >>2fuj_A Conserved hypothetical protein; structural genomics, X-RAY diffraction, hot DOG domain acyl-COA thioesterase, hydrolase; 1.70A {Xanthomonas campestris PV} (A:) Probab=73.66 E-value=6.5 Score=19.41 Aligned_cols=108 Identities=9% Similarity=-0.070 Sum_probs=63.0 Q ss_pred EEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEE Q ss_conf 78875078655300455689952112757888799886401233468826676304511410233798579999998896 Q gi|254780460|r 55 VRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKI 134 (172) Q Consensus 55 i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v 134 (172) .+.+..|.+.+==+.||-.+.-. -...-+|-.+-+.-+.......+......-.++.|++++.+||. +..+..+.++ T Consensus 11 ~~~~~~v~~~d~D~~g~v~~~~y--~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~-i~v~~~~~~~ 87 (137) T 2fuj_A 11 ARVPISVRWRDMDSMGHVNNAKY--ISYLEEARVRWMLGVEGVAMTDRIAPVVAATNVNYKRPLVWPND-ILVELFVERL 87 (137) T ss_dssp EEEEECCCGGGBCTTSSBCHHHH--HHHHHHHHHHHHHHSSSCCCCCSSEEEEEEEEEEECSCCCTTCC-EEEEEEEEEE T ss_pred EEEEEEECHHHCCCCCCCCHHHH--HHHHHHHHHHHHHCCCCCHHHCCEEEEEEEEEEEECCCCCCCCC-EEEEEEEEEE T ss_conf 89988946999188883077999--99998767877630154132255546999999888246668974-4899999992 Q ss_pred ECCCCEEEEEEEEEEE---CCEEEEEEEEEEEEEECC Q ss_conf 3078579999999999---999999997106998617 Q gi|254780460|r 135 LRGRVVLGAADGWVKV---NGKEIYQANDLRVCLTID 168 (172) Q Consensus 135 ~~~~~~~~~~~g~~~v---dg~~i~~a~~l~vgl~~d 168 (172) +.....+...++. ||+++++++...|-+-.+ T Consensus 88 ---~~~s~~~~~~i~~~~~~g~~~a~~~~~~v~~~~~ 121 (137) T 2fuj_A 88 ---GSSSVTIGHRILDQKDEGVLYSDGNVVVVWIDTQ 121 (137) T ss_dssp ---CSSEEEEEEEEEESSCTTCEEEEEEEEEEEESSS T ss_pred ---CCCEEEEEEEEEECCCCCEEEEEEEEEEEEEECC T ss_conf ---8829999999999899989999999999999999 No 73 >>2gvh_A AGR_L_2016P; 15159470, acyl-COA hydrolase, structural genomics, joint center for structural genomics, JCSG; 2.50A {Agrobacterium tumefaciens str} (A:156-288) Probab=69.87 E-value=7.9 Score=18.89 Aligned_cols=102 Identities=11% Similarity=-0.118 Sum_probs=58.7 Q ss_pred EEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEE Q ss_conf 35788750786553004556899521127578887998864012334688266763045114102337985799999988 Q gi|254780460|r 53 GVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFK 132 (172) Q Consensus 53 G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik 132 (172) |+++.+..+.++.=- ..-.+=|-.+..-+-+++++. ...............++.|++++..|+. +..+.++. T Consensus 3 g~~~~~~~~~~~~~n------~~G~~hGG~~~~l~D~a~~~a-a~~~~~~~~~~t~~~~i~f~~pv~~g~~-v~~~a~v~ 74 (133) T 2gvh_A 3 DAVTXVEIVFPDQAN------SAGRXFGGEAIAYXTKAAFVA-ASRYCGKLVVLASSERIDFARAIEIGEI-VEAQAHVE 74 (133) T ss_dssp -CEEEEEECCGGGBC------TTSBBCHHHHHHHHHHHHHHH-HHHHHSSEEEEEEECCEEBSSCCBTTEE-EEEEEEEE T ss_pred CCEEEEEEECHHHCC------CCCCCHHHHHHHHHHHHHHHH-HHHHCCCCCEEEEECCEEEECCEEECCE-EEEEEEEE T ss_conf 661778898723557------788740999999999999999-9986599767999767897500212429-99999999 Q ss_pred EEECCCCEEEEEEEEEEEC----CE--EEEEEEEEEEEE Q ss_conf 9630785799999999999----99--999997106998 Q gi|254780460|r 133 KILRGRVVLGAADGWVKVN----GK--EIYQANDLRVCL 165 (172) Q Consensus 133 ~v~~~~~~~~~~~g~~~vd----g~--~i~~a~~l~vgl 165 (172) +.++...+.+++++.. ++ .++++.-..+.+ T Consensus 75 ---~~gr~~~~~~~~v~~~~~~~~~~~~v~~~~~~~v~~ 110 (133) T 2gvh_A 75 ---RVGRSSXSIQTKLWSENLLTGERHITATGHFTXVAV 110 (133) T ss_dssp ---EECSSEEEEEEEEEEEETTTCCEEEEEEEEEEEEEE T ss_pred ---EECCEEEEEEEEEEEEECCCCCEEEEEEEEEEEEEE T ss_conf ---848669999999999947899689999999999998 No 74 >>2q78_A Uncharacterized protein; TM0581, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE MLC; 2.20A {Thermotoga maritima MSB8} (A:1-132) Probab=67.91 E-value=8.7 Score=18.64 Aligned_cols=104 Identities=12% Similarity=0.081 Sum_probs=59.3 Q ss_pred EEEEEECCCCC-C-CCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEE Q ss_conf 78875078655-3-004556899521127578887998864012334688266763045114102337985799999988 Q gi|254780460|r 55 VRAEMDITPNL-W-FFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFK 132 (172) Q Consensus 55 i~aek~i~~d~-w-ff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik 132 (172) ...+..|+++. | .+.+. .+-||+--.-++.-|-+++.-++...-..+..---.--+++...+..+|. +++++.+++ T Consensus 24 ~t~~~~V~~~~ta~~~~g~-g~~~VlaTp~mi~~mE~aa~~~l~~~L~~g~~sVG~~v~v~Hlaptp~G~-~V~v~a~l~ 101 (132) T 2q78_A 24 LTEDVALDETXVWNEDIEX-LDLHLVATSALIGVVHRVSYELLSRYLPNDYTAVVVETLARHVKAVPTGT-RVAVGVRVV 101 (132) T ss_dssp EEEEEEECGGGBCCSCGGG-GGGCBBCHHHHHHHHHHHHHHHHHTTSCTTEEEEEEEEEEEECSCCBSSE-EEEEEEEEE T ss_pred EEEEEEECCCCCCCCCCCC-CCCCEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCC-EEEEEEEEE T ss_conf 8899996321145668552-25516725999999999999999965899974899999999941579998-999999999 Q ss_pred EEECCCCEEEEEEEEEEECCEEEEEEEEEEE Q ss_conf 9630785799999999999999999971069 Q gi|254780460|r 133 KILRGRVVLGAADGWVKVNGKEIYQANDLRV 163 (172) Q Consensus 133 ~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~v 163 (172) ++..++ +.|+.+++-++.+|.+++--.+ T Consensus 102 ~v~gr~---i~F~v~A~d~~~~Ig~G~H~R~ 129 (132) T 2q78_A 102 GVVGNR---VKFRGIVXSGDEKILEAEFVRA 129 (132) T ss_dssp EEETTE---EEEEEEEEETTEEEEEEEEEEE T ss_pred EEECCE---EEEEEEEEECCCCEEEEEEEEE T ss_conf 996999---9999999999970999999999 No 75 >>2q2b_A Cytosolic acyl coenzyme A thioester hydrolase; ACOT7, C-terminal domain; 2.50A {Mus musculus} (A:) Probab=65.32 E-value=9.8 Score=18.34 Aligned_cols=92 Identities=10% Similarity=0.041 Sum_probs=55.4 Q ss_pred CCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEE Q ss_conf 34235788750786553004556899521127578887998864012334688266763045114102337985799999 Q gi|254780460|r 50 YNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGI 129 (172) Q Consensus 50 ~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i 129 (172) ...|+++....+.+. +-. ...++-|..++..+-.+++..+. .............++.|++++..|+ .++++. T Consensus 22 ~~~~~~~~~~~v~p~--~~n----~~G~vhGG~i~~l~D~~~~~~a~-~~~~~~~~~t~~~~i~fl~p~~~g~-~i~~~a 93 (179) T 2q2b_A 22 VSYSQSSLIHLVGPS--DCT----LHGFVHGGVTMKLMDEVAGIVAA-RHCKTNIVTASVDAINFHDKIRKGC-VITISG 93 (179) T ss_dssp HHHHCEEEEEECC------------CCBCCHHHHHHHHHHHHHHHHH-HHHCSCCEEEEEEEEEECSCCBTTE-EEEEEE T ss_pred CCCCCEEEEEEECHH--HCC----CCCCCHHHHHHHHHHHHHHHHHH-HHHCCCCCEEEEEEEEEEEECCCEE-EEEEEE T ss_conf 775603667898864--659----89849499999999999999999-9708997468987689963013215-799999 Q ss_pred EEEEEECCCCEEEEEEEEEEECC Q ss_conf 98896307857999999999999 Q gi|254780460|r 130 DFKKILRGRVVLGAADGWVKVNG 152 (172) Q Consensus 130 ~ik~v~~~~~~~~~~~g~~~vdg 152 (172) ++.++ ++...+.+++++.++ T Consensus 94 ~v~~~---g~~~~~v~~~v~~~~ 113 (179) T 2q2b_A 94 RMTFT---SNKSMEIEVLVDADP 113 (179) T ss_dssp EEEEE---ETTEEEEEEEEEEEE T ss_pred EEEEC---CCCCEEEEEEEEEEC T ss_conf 99972---885237889999851 No 76 >>3hdu_A Putative thioesterase; YP_461911.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.50A {Syntrophus aciditrophicus SB} (A:) Probab=64.17 E-value=10 Score=18.21 Aligned_cols=53 Identities=4% Similarity=-0.189 Sum_probs=37.3 Q ss_pred EEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEE Q ss_conf 66763045114102337985799999988963078579999999999-99999999710 Q gi|254780460|r 104 GRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDL 161 (172) Q Consensus 104 ~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l 161 (172) .....--++.|++++.+++ ++.+- ++.+.++..++.+++++. ||+++++++.- T Consensus 100 ~~~t~~l~v~~~~p~~~~~--v~~~a---~~~~~gr~~~~~~~~i~~~~g~lva~a~~t 153 (157) T 3hdu_A 100 RLSTXSLHVEYLRPGLGRE--FVCTG---YNVRTGNKVAVIRTELXNDQDELIAVGSVS 153 (157) T ss_dssp GEEEEEEEEEESSCCCCSE--EEEEE---EEEEECSSEEEEEEEEEETTCCEEEEEEEE T ss_pred CEEEEEEEEEEECCCCCCE--EEEEE---EEEEECCCEEEEEEEEEECCCCEEEEEEEE T ss_conf 2377999999851554433--68899---999918979999999996899899999999 No 77 >>2o5u_A Thioesterase; putative thioesterese,, hydrolase; 1.91A {Pseudomonas aeruginosa} (A:) Probab=61.41 E-value=12 Score=17.91 Aligned_cols=108 Identities=8% Similarity=-0.178 Sum_probs=62.2 Q ss_pred EEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHH-HHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEE Q ss_conf 78875078655300455689952112757888799886-40123346882667630451141023379857999999889 Q gi|254780460|r 55 VRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTG-FFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKK 133 (172) Q Consensus 55 i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~-~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~ 133 (172) ...+..|.+.+==+.||-.+.-.+ .++-+|..+.+. ..+......+......-..++|++++..||.+ +....+.+ T Consensus 15 ~~~~~~V~~~d~D~~g~v~~~~y~--~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~v-~v~~~~~~ 91 (148) T 2o5u_A 15 HFQPISTRWHDNDIYGHVNNVTYY--AFFDTAVNTYLIERGGLDIQGGEVIGLVVSSSCDYFAPVAFPQRI-EMGLRVAR 91 (148) T ss_dssp EEEEECCCGGGBCTTSSBCHHHHH--HHHHHHHHHHHHHHHCCCTTTCSEEEEEEEEEEEECSCCCTTSCE-EEEEEEEE T ss_pred EEEEEECCHHHCCCCCCCCHHHHH--HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCE-EEEEEECC T ss_conf 799744298884867841549999--999999998764036531001575304446789993656789733-89999800 Q ss_pred EECCCCEEEEEEEEEEE--CCEEEEEEEEEEEEEECC Q ss_conf 63078579999999999--999999997106998617 Q gi|254780460|r 134 ILRGRVVLGAADGWVKV--NGKEIYQANDLRVCLTID 168 (172) Q Consensus 134 v~~~~~~~~~~~g~~~v--dg~~i~~a~~l~vgl~~d 168 (172) + +.........++. +|++++++....+.+-.+ T Consensus 92 ~---~~~~~~~~~~i~~~~~g~~~a~~~~~~v~~d~~ 125 (148) T 2o5u_A 92 L---GNSSVQYELALFLEGQREACAAGRFVHVFVERR 125 (148) T ss_dssp E---CSSEEEEEEEEEESSCCBCSEEEEEEEEEEETT T ss_pred C---CCCEEEEEEEEEECCCCEEEEEEEEEEEEEECC T ss_conf 4---873599999998557874999999999999899 No 78 >>1vpm_A Acyl-COA hydrolase; NP_241664.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: COA; 1.66A {Bacillus halodurans c-125} (A:) Probab=57.77 E-value=13 Score=17.53 Aligned_cols=88 Identities=10% Similarity=-0.044 Sum_probs=50.4 Q ss_pred EEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEE Q ss_conf 35788750786553004556899521127578887998864012334688266763045114102337985799999988 Q gi|254780460|r 53 GVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFK 132 (172) Q Consensus 53 G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik 132 (172) |+++.+..+.+. +.. ...++=|-.+...+-.++++ +...............++.|++++..|+ .++++.++. T Consensus 22 ~~~~~~~~v~~~--~~n----~~G~vhGG~l~~l~D~a~~~-~~~~~~~~~~~~t~~~~i~f~~pv~~g~-~i~~~a~v~ 93 (169) T 1vpm_A 22 SRTIQTRLVLPP--DTN----HLGTIFGGKVLAYIDEIAAL-TAXKHANSAVVTASIDSVDFKSSATVGD-ALELEGFVT 93 (169) T ss_dssp TCEEEEEECCGG--GBC----TTSBBCHHHHHHHHHHHHHH-HHHHHHTSEEEEEEECCCCCCSCCBTTE-EEEEEEEEE T ss_pred CEEEEEEEECHH--HCC----CCCCCHHHHHHHHHHHHHHH-HHHHHCCCCCEEEEEEEEEEEEECCCCC-EEEEEEEEE T ss_conf 628999998844--578----78859389999999999999-9998538985289986789975016784-799999998 Q ss_pred EEECCCCEEEEEEEEEEEC Q ss_conf 9630785799999999999 Q gi|254780460|r 133 KILRGRVVLGAADGWVKVN 151 (172) Q Consensus 133 ~v~~~~~~~~~~~g~~~vd 151 (172) ++ ++...+.+++++.. T Consensus 94 ~~---g~~~~~~~~~v~~~ 109 (169) T 1vpm_A 94 HT---GRTSXEVYVRVHSN 109 (169) T ss_dssp EE---CSSEEEEEEEEEEE T ss_pred EE---CCEEEEEEEEEEEE T ss_conf 61---45168776899982 No 79 >>3ck1_A Putative thioesterase; YP_296387.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.74A {Ralstonia eutropha JMP134} (A:) Probab=55.72 E-value=15 Score=17.32 Aligned_cols=108 Identities=9% Similarity=-0.123 Sum_probs=60.2 Q ss_pred EEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH-CCC----CCCCCCEEEEEECCCEEEEEECCCCCEEEEEE Q ss_conf 7887507865530045568995211275788879988640-123----34688266763045114102337985799999 Q gi|254780460|r 55 VRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFF-LGW----LGELGKGRAVSVSNIKFRGMVTPDCKLVEYGI 129 (172) Q Consensus 55 i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~-~~~----~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i 129 (172) .+.+..|.+.|==+.|| .+......- +-+|-.+.+.-. ... ....+.+....-..++|++++.+||. ++.+. T Consensus 6 ~~~~~~V~~~d~D~~g~-v~~~~y~~~-~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~y~~~~~~gd~-i~v~t 82 (150) T 3ck1_A 6 FRNTVLVRFKHCDAAGI-VFYPRYFEX-LNDFIEDWFAQALDWPFDAXHGAGQAGVPTADLHCRFVAPSRLGET-LTREL 82 (150) T ss_dssp EEEEEECCGGGBCTTSB-BCHHHHHHH-HHHHHHHHHHHTSSCCHHHHHTTTCEECCEEEEEEEECSCCBTTCE-EEEEE T ss_pred EEEEEEECHHHCCCCCC-CCHHHHHHH-HHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEEEEEEEHHHHHHCCC-CEEEE T ss_conf 58988838788098773-527899999-9999998861033466888864489518999877441232001001-00488 Q ss_pred EEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEEECC Q ss_conf 988963078579999999999-999999997106998617 Q gi|254780460|r 130 DFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCLTID 168 (172) Q Consensus 130 ~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl~~d 168 (172) .+.++ ++......-.++. ||+++++++...+-+-.+ T Consensus 83 ~v~~~---~~~~~~~~~~i~~~dg~~~a~~~~~~v~vd~~ 119 (150) T 3ck1_A 83 RVVKL---GQSSFTVQVRFXGPDSGLRLEVTQRLVCVDTD 119 (150) T ss_dssp EEEEE---CSSEEEEEEEEECTTSCEEEEEEEEEECEEET T ss_pred EEEEC---CCCEEEEEEEEECCCCEEEEEEEEEEEEEECC T ss_conf 99971---88189987453425765889999999999899 No 80 >>3e1e_A Thioesterase family protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Silicibacter pomeroyi} (A:) Probab=53.08 E-value=16 Score=17.07 Aligned_cols=109 Identities=11% Similarity=0.026 Sum_probs=61.6 Q ss_pred EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEE Q ss_conf 89999718441342357887507865530045568995211275788879988640123346882667630451141023 Q gi|254780460|r 39 RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMV 118 (172) Q Consensus 39 rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V 118 (172) ++.++++ |+++....++++ +.. ....+-|-.+...+-.++++. .............++...|..++ T Consensus 27 ~~~~~~~-------~~~~~~~~~~~~--~~n----~~g~vhGG~l~~~~D~~~~~~-a~~~~~~~~~~~t~~~~~~~~~~ 92 (141) T 3e1e_A 27 RIDTLLP-------GRVELCMPYDRA--LTQ----QHGFLHAGIVSTVLDSACGYA-AFSLMEEEAAVLTVEFKVNFLNP 92 (141) T ss_dssp EEEEEET-------TEEEEEEECCGG--GBC----TTSSBCHHHHHHHHHHHHHHH-HHTTSCTTEEEEEEEEEEEECSC T ss_pred EEEEEEC-------CEEEEEEECCHH--HCC----CCCCEEHHHHHHHHHHHHHHH-HHHHCCCCCCEEEEEEEEEEECC T ss_conf 9999959-------999999997989--949----999383888888877668888-88644643310214799998727 Q ss_pred CCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE----CCEEEEEEEEEEEEE Q ss_conf 37985799999988963078579999999999----999999997106998 Q gi|254780460|r 119 TPDCKLVEYGIDFKKILRGRVVLGAADGWVKV----NGKEIYQANDLRVCL 165 (172) Q Consensus 119 ~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v----dg~~i~~a~~l~vgl 165 (172) .+|+. ++.+.++. +.++..++.++++++ +|+++++++-..+.+ T Consensus 93 ~~g~~-l~~~a~v~---~~~~~~~~~~~~v~~~~~~~g~~va~~~~t~~~~ 139 (141) T 3e1e_A 93 AEGER-FAFRAEVV---KPGRTLTVATATAYAFRDGEERAIATMTATLMAL 139 (141) T ss_dssp CCSSE-EEEEEEEE---ECCSSEEEEEEEEEEESSSCEEEEEEEEEEEEEE T ss_pred CCCCE-EEEEEEEE---ECCCCEEEEEEEEEEEECCCCCEEEEEEEEEEEE T ss_conf 76647-99999999---9489699999999998689982999999999994 No 81 >>2oaf_A Thioesterase superfamily; YP_508616.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: CIT PGE; 2.00A {Jannaschia SP} (A:) Probab=51.53 E-value=17 Score=16.92 Aligned_cols=107 Identities=12% Similarity=-0.056 Sum_probs=60.9 Q ss_pred EEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHC------CCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEE Q ss_conf 8875078655300455689952112757888799886401------2334688266763045114102337985799999 Q gi|254780460|r 56 RAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFL------GWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGI 129 (172) Q Consensus 56 ~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~------~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i 129 (172) +.+..|.+.+==+.||-.+.-. . ..+-+|-.....-+. ......+......-..++|++++.+|+.+ +.+. T Consensus 18 ~~~~~V~~~d~D~~g~v~~~~y-~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~~gd~i-~v~t 94 (151) T 2oaf_A 18 VHDVRVTWGDCDPAKIAYTGHL-P-RFALEAIDAWWSEYHGPGGWYHLELDTNVGTPFVRLEXDFKSPVTPRHIL-KCHT 94 (151) T ss_dssp EEEECCCGGGBCTTSSBCGGGH-H-HHHHHHHHHHHHHHTCTTHHHHHHHTTCEECCEEEEEEEECSCCCTTSCE-EEEE T ss_pred EEEEEECHHHCCCCCEECHHHH-H-HHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEEEEEEEEEECCCEE-EEEE T ss_conf 9999928899488772354999-9-99999877576543354303678986497639997841885200078444-4677 Q ss_pred EEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEECC Q ss_conf 988963078579999999999999999997106998617 Q gi|254780460|r 130 DFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTID 168 (172) Q Consensus 130 ~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~d 168 (172) .+.++ +.....++..++.+|+++++++...+-+-.+ T Consensus 95 ~i~~~---~~~~~~~~~~i~~~g~~~a~~~~~~v~~d~~ 130 (151) T 2oaf_A 95 WPTRL---GTKSITFRVDGVQDGVTCFVGAFTCVFTIAD 130 (151) T ss_dssp EEEEE---CSSEEEEEEEEEETTEEEEEEEEEEEEEEGG T ss_pred EEEEC---CCCEEEEEEEEEECCCEEEEEEEEEEEEECC T ss_conf 77204---7625899999983331156888999999899 No 82 >>3hm0_A Probable thioesterase; niaid, ssgcid, decode, UW, SBRI, infectious disease, rhizobiales, bacteremia, endocarditis, bacillary angiomatosis; 2.50A {Bartonella henselae} (A:) Probab=48.85 E-value=19 Score=16.66 Aligned_cols=106 Identities=6% Similarity=-0.177 Sum_probs=62.5 Q ss_pred EEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCC-------CCCCCCCEEEEEECCCEEEEEECCCCCEEEEE Q ss_conf 88750786553004556899521127578887998864012-------33468826676304511410233798579999 Q gi|254780460|r 56 RAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLG-------WLGELGKGRAVSVSNIKFRGMVTPDCKLVEYG 128 (172) Q Consensus 56 ~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~-------~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~ 128 (172) .-...|.+.|==+.||-.+.-.+- .+-||-...+.-+.. .....+.+....-.++.|++++.+||. ++.+ T Consensus 38 ~~~~~v~~~d~D~~g~v~~~~y~~--~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~i~y~~~i~~gd~-i~v~ 114 (167) T 3hm0_A 38 DFQARVYVADTDFSGVVYHARYLE--FFERGRSEFLRDTGFNNTLLASGVEGEKLFFVVRHMEINFSRPAQIDNL-LTIK 114 (167) T ss_dssp EEEEECCGGGBCTTSSBCTTHHHH--HHHHHHHHHHHTTSCCHHHHHHTTTSSCEEEEEEEEEEEECSCCCTTCE-EEEE T ss_pred EEEEEECHHHCCCCCEECHHHHHH--HHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCE-EEEE T ss_conf 857997389958987675899999--9999999999983998889755552287699999873447256658835-6899 Q ss_pred EEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEEC Q ss_conf 998896307857999999999999999999710699861 Q gi|254780460|r 129 IDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTI 167 (172) Q Consensus 129 i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~ 167 (172) ..+.++ +........+++.+|+++++++-..+.+-+ T Consensus 115 ~~~~~~---~~~~~~~~~~i~~~g~~~a~~~~~~v~id~ 150 (167) T 3hm0_A 115 TRISRL---QGARFFMEQYILHGESMLVTAKVEIALINE 150 (167) T ss_dssp EEEEEE---CSSEEEEEEEEEETTEEEEEEEEEEEEEET T ss_pred EEEEEC---CCEEEEEEEEEEECCEEEEEEEEEEEEECC T ss_conf 999980---866999999999899999999999999989 No 83 >>3b7k_A Acyl-coenzyme A thioesterase 12; hotdog fold, structural genomics, structural genomics consortium, SGC, cytoplasm, fatty acid metabolism, hydrolase; HET: COA; 2.70A {Homo sapiens} (A:) Probab=47.40 E-value=20 Score=16.53 Aligned_cols=108 Identities=12% Similarity=-0.064 Sum_probs=62.1 Q ss_pred CCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEE Q ss_conf 99864122568999971844134235788750786553004556899521127578887998864012334688266763 Q gi|254780460|r 29 LPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVS 108 (172) Q Consensus 29 LP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~ 108 (172) +..+++.+.....-..... |.++.+..+.+ |+.. ..-++-|-.+.-.+=.+++.. ............. T Consensus 179 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--~~~n----~~g~vhGG~l~~l~D~~~~~~-~~~~~~~~~~~t~ 246 (333) T 3b7k_A 179 SKFDDLIFDEEEGAVSTRG-----TSVQSIELVLP--PHAN----HHGNTFGGQIMAWMETVATIS-ASRLCWAHPFLKS 246 (333) T ss_dssp -----------------CC-----CCEEEEEECCG--GGBC----TTCBBCHHHHHHHHHHHHHHH-HHTSBSSCCEEEE T ss_pred HHHCCCCCCCCCCCCCCCC-----CEEEEEEEECC--HHHC----CCCCEEHHHHHHHHHHHHHHH-HHHHCCCCCEEEE T ss_conf 1000000147777644456-----21799999764--2303----579809899999999999999-9997599846999 Q ss_pred ECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECC Q ss_conf 04511410233798579999998896307857999999999999 Q gi|254780460|r 109 VSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNG 152 (172) Q Consensus 109 ~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg 152 (172) ..++.|++++..|+ .++++.++.++ ++...+.+++++..+ T Consensus 247 ~l~i~f~~p~~~g~-~l~~~a~v~~~---g~~~~~~~~~v~~~~ 286 (333) T 3b7k_A 247 VDMFKFRGPSTVGD-RLVFTAIVNNT---FQTCVEVGVRVEAFD 286 (333) T ss_dssp ECCEECCSCCBTTC-EEEEEEEEEEE---ETTEEEEEEEEEEEC T ss_pred EEEEEEEEEEECCE-EEEEEEEEEEE---CCEEEEEEEEEEEEE T ss_conf 51289973671470-99999999994---674999999999981 No 84 >>2ali_A Hypothetical protein PA2801; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.75A {Pseudomonas aeruginosa} (A:) Probab=44.17 E-value=22 Score=16.23 Aligned_cols=108 Identities=10% Similarity=-0.131 Sum_probs=64.0 Q ss_pred EEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEE Q ss_conf 78875078655300455689952112757888799886401233468826676304511410233798579999998896 Q gi|254780460|r 55 VRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKI 134 (172) Q Consensus 55 i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v 134 (172) .+.+..|.+.+-=..||-.+ .... ...-+|-.+.+.-+.........+....-..++|++++.+||. +..+..+..+ T Consensus 30 ~~~~~~v~~~d~D~~g~v~~-~~y~-~~~~~ar~~~~~~~g~~~~~~~~~~v~~~~~~~f~~~~~~gd~-i~i~~~v~~~ 106 (158) T 2ali_A 30 HTAHIPVRWGDXDSYGHVNN-TLYF-QYLEEARVAWFETLGIDLEGAAEGPVVLQSLHTYLKPVVHPAT-VVVELYAGRL 106 (158) T ss_dssp EEEEEECCGGGBCTTSSBCT-THHH-HHHHHHHHHHHHHTTCCCSSCSEEEEEEEEEEEECSCCCSSCE-EEEEEEEEEE T ss_pred EEEEEEECHHHCCCCCCEEH-HHHH-HHHHHHHHHHHHHHCCCHHHCCCCCEEHHHHHHCCCCCCCCCC-EEEEEEEEEC T ss_conf 89997836789687782440-9999-9999999999998544744515540000222210112148962-3899999967 Q ss_pred ECCCCEEEEEEEEEEE---CCEEEEEEEEEEEEEECC Q ss_conf 3078579999999999---999999997106998617 Q gi|254780460|r 135 LRGRVVLGAADGWVKV---NGKEIYQANDLRVCLTID 168 (172) Q Consensus 135 ~~~~~~~~~~~g~~~v---dg~~i~~a~~l~vgl~~d 168 (172) +.........++. +|+++++++...|.+-.+ T Consensus 107 ---~~~s~~~~~~i~~~~~~g~~~a~~~~~~v~~d~~ 140 (158) T 2ali_A 107 ---GTSSLVLEHRLHTLEDPQGTYGEGHCKLVWVRHA 140 (158) T ss_dssp ---CSSEEEEEEEEEESSCTTSCCEEEEEEEEEEEGG T ss_pred ---CCCEEEEEEEEEECCCCCEEEEEEEEEEEEEECC T ss_conf ---9838999999999799988999999999999999 No 85 >>2own_A Putative oleoyl-[acyl-carrier protein] thioesterase; NP_784467.1, oleoyl thioesterase (putative), structural genomics; 2.00A {Lactobacillus plantarum} (A:) Probab=43.24 E-value=23 Score=16.14 Aligned_cols=52 Identities=8% Similarity=-0.001 Sum_probs=31.3 Q ss_pred CCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEE-ECCEEEEEEEEEEEEE Q ss_conf 4511410233798579999998896307857999999999-9999999997106998 Q gi|254780460|r 110 SNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVK-VNGKEIYQANDLRVCL 165 (172) Q Consensus 110 ~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~-vdg~~i~~a~~l~vgl 165 (172) ..+.|++++.+||. ++....+.++ ++..+.+ .-.++ .||+++++++-..+.+ T Consensus 205 ~~i~y~~~~~~gd~-i~v~~~~~~~--~~~~~~~-~~~i~~~~g~~~a~~~~~~v~~ 257 (262) T 2own_A 205 VDVRYENEVKYGQT-VTAHANILPS--EVADQVT-TSHLIEVDDEKCCEVTIQWRTL 257 (262) T ss_dssp EEEEECSCCCTTCE-EEEEEEEECC--SSTTEEE-EEEEEEETTEEEEEEEEEEEEC T ss_pred EEEEEECCCCCCCE-EEEEEEEEEC--CCCCCEE-EEEEEECCCEEEEEEEEECCCC T ss_conf 99999534689998-9999999524--7754159-9999979799999999992579 No 86 >>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} (A:) Probab=40.71 E-value=3.4 Score=21.12 Aligned_cols=12 Identities=17% Similarity=0.523 Sum_probs=4.5 Q ss_pred CCCCCCCCCCCC Q ss_conf 553004556899 Q gi|254780460|r 64 NLWFFDCHFKND 75 (172) Q Consensus 64 d~wff~gHFp~~ 75 (172) -.|.|-||+|+. T Consensus 106 G~~~~HCHi~~H 117 (129) T 2ccw_A 106 ENYAYFCSFPGH 117 (129) T ss_dssp CCEEEECCSTTG T ss_pred CEEEEEECCCCC T ss_conf 619999699980 No 87 >>2nuj_A Thioesterase superfamily; YP_509914.1, structural genomics, PSI-2, protein structure initiative, joint center for structural genomics, JCSG; 2.00A {Jannaschia} (A:) Probab=40.11 E-value=26 Score=15.85 Aligned_cols=108 Identities=5% Similarity=-0.181 Sum_probs=59.9 Q ss_pred EEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHH-HCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEE Q ss_conf 788750786553004556899521127578887998864-0123346882667630451141023379857999999889 Q gi|254780460|r 55 VRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGF-FLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKK 133 (172) Q Consensus 55 i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~-~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~ 133 (172) .+.+..|.+.+-=+.||-.+.-.+ .++-+|..+.+.- ........+......-..++|++++..||. ++.+..+.. T Consensus 27 ~~~~~~v~~~d~D~~g~v~~~~yl--~~~~~a~~~~~~~~g~~~~~~~~~~~vv~~~~i~y~~~~~~gd~-i~v~~~~~~ 103 (163) T 2nuj_A 27 FGLADRVRFGELDAIGHVNHTAYL--RWYESFRLPFLKARHVTDYGPTSPRLVLKQVHCTYLAEXGXGED-YVITGRVSN 103 (163) T ss_dssp EEEEEECCGGGBCTTSSBCHHHHH--HHHHHHHHHHHHHTTSCCCSSSSCEEEEEEEEEEECSCCCTTCE-EEEEEEEEE T ss_pred CEEEEEEEEHHCCCCCCEEEHHHH--HHHHHHHHHHHHHHHCCCHHCCCCCCCCCEEEEEEEECCCEEEE-EEEEEEEEE T ss_conf 077789841676777851208999--99999999999973312010015530022689998504410048-999998873 Q ss_pred EECCCCEEEEEEEEEEE---CCEEEEEEEEEEEEEECC Q ss_conf 63078579999999999---999999997106998617 Q gi|254780460|r 134 ILRGRVVLGAADGWVKV---NGKEIYQANDLRVCLTID 168 (172) Q Consensus 134 v~~~~~~~~~~~g~~~v---dg~~i~~a~~l~vgl~~d 168 (172) +.. . .......+++ +|+++++++...|-+-.+ T Consensus 104 ~~~--~-s~~~~~~~~~~~~~g~~~a~~~~~~v~id~~ 138 (163) T 2nuj_A 104 FRT--T-SFTXEFACWRLGDAVECTSEGSAVVVLLNRD 138 (163) T ss_dssp ECS--S-EEEEEEEEEECSSSCEEEEEEEEEEEEECTT T ss_pred CCC--C-EEEEEEEEEECCCCCCEEEEEEEEEEEEECC T ss_conf 698--5-8999999996188731399999999999899 No 88 >>1tbu_A Peroxisomal acyl-coenzyme A thioester hydrolase 1; yeast peroxisomal thioesterase, , domain swapping, iodine SOAK, siras; 2.20A {Saccharomyces cerevisiae} (A:) Probab=37.16 E-value=29 Score=15.57 Aligned_cols=47 Identities=15% Similarity=0.110 Sum_probs=33.7 Q ss_pred ECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEE Q ss_conf 045114102337985799999988963078579999999999999999997 Q gi|254780460|r 109 VSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQAN 159 (172) Q Consensus 109 ~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~ 159 (172) .-.+-|-+++.|+.. ++|++ +.+ +.++.+......++-||++++++. T Consensus 65 sl~~~fl~p~~~~~p-~~~~v--~~l-r~GRs~~~~~v~~~Q~g~~~~~a~ 111 (118) T 1tbu_A 65 SLHSYFIKGGDPRTK-ITYHV--QNL-RNGRNFIHKQVSAYQHDKLIFTSM 111 (118) T ss_dssp EEEEEECSCCCTTSC-CEEEE--EEE-EECSSEEEEEEEEEETTEEEEEEE T ss_pred EEEEEEECCCCCCCE-EEEEE--EEC-CCCCCEEEEEEEEEECCEEEEEEE T ss_conf 788898348888843-99998--621-078668999999999999899999 No 89 >>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A (A:417-489,A:790-965) Probab=32.26 E-value=11 Score=18.05 Aligned_cols=68 Identities=13% Similarity=0.144 Sum_probs=40.8 Q ss_pred CCCCCCCCCCCC-CCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEE-CCCCCEEEEEEEEE Q ss_conf 865530045568-995211275788879988640123346882667630451141023-37985799999988 Q gi|254780460|r 62 TPNLWFFDCHFK-NDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMV-TPDCKLVEYGIDFK 132 (172) Q Consensus 62 ~~d~wff~gHFp-~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V-~Pgd~~i~~~i~ik 132 (172) ..+.+|+.+|-. +.+++||+-.+|..+.++........ ...-..+.+++|.++. +|.++.+++.+.+. T Consensus 155 ~~~~~~l~~H~I~G~~l~Patgylela~~a~~~~~~~~~---~~~~v~ledv~f~~pl~l~~~~~v~l~v~l~ 224 (249) T 3hhd_A 155 ESPDHYLVDHTLDGRVLFPATGYLSIVWKTLARALGLGV---EQLPVVFEDVVLHQATILPKTGTVSLEVRLL 224 (249) T ss_dssp ------------------------------------------------------------------------- T ss_pred CCCCHHHCCCEECCEEEECCHHHHHHHHHHHHHHHCCCC---CCCCCEEEEEEECCCEEECCCCCEEEEEEEE T ss_conf 899634254979999864568999999999999846898---5068489982872675827998489999997 No 90 >>1njk_A Hypothetical protein YBAW; structural genomics, thioesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Escherichia coli} (A:) Probab=28.83 E-value=40 Score=14.74 Aligned_cols=109 Identities=13% Similarity=0.104 Sum_probs=60.6 Q ss_pred EEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHC--CCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEE Q ss_conf 78875078655300455689952112757888799886401--2334688266763045114102337985799999988 Q gi|254780460|r 55 VRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFL--GWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFK 132 (172) Q Consensus 55 i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~--~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik 132 (172) .+.+..|.+.+==+.||-.+.-. . .++-+|-.+.+.-+. .............-..++|++++.+|++ ++.+..+. T Consensus 23 ~~~~~~v~~~d~D~~g~v~~~~~-~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~d~-i~v~~~~~ 99 (156) T 1njk_A 23 XQTQIKVRGYHLDVYQHVNNARY-L-EFLEEARWDGLENSDSFQWXTAHNIAFVVVNININYRRPAVLSDL-LTITSQLQ 99 (156) T ss_dssp EEEEEECCGGGBCTTSSBCHHHH-H-HHHHHHHHHHHHSCHHHHHHHHTTEEEEEEEEEEEECSCCCTTCE-EEEEEEEE T ss_pred EEEEEEECHHHCCCCCEECHHHH-H-HHHHHHHHHHHHHCCCHHHHHHCCCEEEEEEEEEEEECCCCCCCE-EEEEEEEE T ss_conf 68998988999788882557999-9-999999999998738788998579279999999998113557973-79999999 Q ss_pred EEECCCCEEEEEEEEEEE--CCEEEEEEEEEEEEEECCC Q ss_conf 963078579999999999--9999999971069986176 Q gi|254780460|r 133 KILRGRVVLGAADGWVKV--NGKEIYQANDLRVCLTIDR 169 (172) Q Consensus 133 ~v~~~~~~~~~~~g~~~v--dg~~i~~a~~l~vgl~~de 169 (172) .+.+. .......++. +|+++++++...+-+-.+. T Consensus 100 ~~~~~---s~~~~~~i~~~~~~~~~a~~~~~~v~~d~~~ 135 (156) T 1njk_A 100 QLNGK---SGILSQVITLEPEGQVVADALITFVCIDLKT 135 (156) T ss_dssp EEETT---EEEEEEEEEETTTTEEEEEEEEEEEEEETTT T ss_pred ECCCE---EEEEEEEEEECCCCEEEEEEEEEEEEEECCC T ss_conf 83874---9999999999999959999999999999999 No 91 >>2hlj_A Hypothetical protein; NP_742468.1, structural genomics, PSI- 2, protein structure initiative, joint center for structural genomics; HET: MSE; 2.00A {Pseudomonas putida KT2440} (A:) Probab=27.64 E-value=42 Score=14.61 Aligned_cols=105 Identities=8% Similarity=-0.024 Sum_probs=55.6 Q ss_pred EEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHH---HHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEE Q ss_conf 75078655300455689952112757888799886---401233468826676304511410233798579999998896 Q gi|254780460|r 58 EMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTG---FFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKI 134 (172) Q Consensus 58 ek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~---~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v 134 (172) +..|.+.|==..||-.+ .... .++-+|-.+.+. .........+......-..+.|++++.+|+. ++.+..+.++ T Consensus 9 ~~~v~~~d~D~~g~v~~-~~y~-~~~~~ar~~~~~~~g~~~~~~~~~~~~~~v~~~~i~y~~~~~~~d~-i~v~~~~~~~ 85 (157) T 2hlj_A 9 RTTVQEDWVDYNGHLRD-AFYL-LIFSYATDALXDRIGLDADSRGQSGNSLFTLEAHINYLHEVKLGTE-VWVQTQILGF 85 (157) T ss_dssp EEECCGGGBCTTSBBCH-HHHH-HHHHHHHHHHHHHHTTTTTSTTTTTTTEEEEEEEEEECSCCBTTCE-EEEEEEEEEE T ss_pred EEEECHHHCCCCCCCHH-HHHH-HHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEEEEEECCCCCCCCC-CEEEEEEECC T ss_conf 78978788045677268-9999-9999999988755136623444211000101244542123330313-3899865126 Q ss_pred ECCCCEEEEEEEEEEEC--CEEEEEEEEEEEEEECC Q ss_conf 30785799999999999--99999997106998617 Q gi|254780460|r 135 LRGRVVLGAADGWVKVN--GKEIYQANDLRVCLTID 168 (172) Q Consensus 135 ~~~~~~~~~~~g~~~vd--g~~i~~a~~l~vgl~~d 168 (172) +........+++.. |++++++....+.+-.+ T Consensus 86 ---~~~s~~~~~~i~~~~~~~~~a~~~~~~v~~d~~ 118 (157) T 2hlj_A 86 ---DRKRLHVYHSLHRAGFDEVLAASEQXLLHVDLA 118 (157) T ss_dssp ---CSSEEEEEEEEEETTEEEEEEEEEEEEEEBCC- T ss_pred ---CCCCEEEEEEEECCCCHHEEEEEEEEEEEEECC T ss_conf ---874035555420244102001347999999789 No 92 >>3bbj_A Putative thioesterase II; YP_290423.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.16A {Thermobifida fusca YX} (A:) Probab=27.34 E-value=42 Score=14.58 Aligned_cols=44 Identities=11% Similarity=0.161 Sum_probs=25.9 Q ss_pred CCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEE Q ss_conf 5114102337985799999988963078579999999999999999997 Q gi|254780460|r 111 NIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQAN 159 (172) Q Consensus 111 ~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~ 159 (172) .+.|-+++.++. + +++++.+.. ++.+.....+++-+|++++++. T Consensus 62 ~~~Fl~p~~~~p--i--~~~V~~lr~-GR~~s~~~v~~~Q~g~~~~~a~ 105 (272) T 3bbj_A 62 SYHFHRPASSGP--A--EIETRVLKR-GRTVTTVQTTLFQEGRTILTGT 105 (272) T ss_dssp EEEECSCCCSEE--E--EEEEEEEEC-CSSCEEEEEEEEETTEEEEEEE T ss_pred EEEECCCCCCCC--E--EEEEEEEEC-CCCEEEEEEEEEECCCEEEEEE T ss_conf 866336788987--8--999999868-9978999999997896099999 No 93 >>3cjy_A Putative thioesterase; YP_496845.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.70A {Novosphingobium aromaticivorans DSM12444} (A:) Probab=26.88 E-value=43 Score=14.53 Aligned_cols=53 Identities=9% Similarity=0.207 Sum_probs=34.3 Q ss_pred CCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEEC Q ss_conf 4511410233798579999998896307857999999999999999999710699861 Q gi|254780460|r 110 SNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTI 167 (172) Q Consensus 110 ~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~ 167 (172) -.+.|-+.+.|+.. ++ +++..+.. ++.+....++++-+|++++++. ++.+..+ T Consensus 59 ~~~~Fl~~~~~~~p-~~--~~v~~lr~-Gr~~~~~~v~~~Q~g~~~~~a~-~~f~~~~ 111 (259) T 3cjy_A 59 GSLQFVSFTPLGSV-LD--LTVEVLQS-GRTLAQARVAGTVDGRLVFHSG-ISLGXRE 111 (259) T ss_dssp EEEEECSCCBTTCE-EE--EEEEEEEE-CSSCEEEEEEEEETTEEEEEEE-EEECCCT T ss_pred EEEEECCCCCCCCC-EE--EEEEEEEC-CCCEEEEEEEEEECCCCEEEEE-EECCCCC T ss_conf 89997166689999-99--99998658-9974899999993687348876-4112357 No 94 >>2ess_A Acyl-ACP thioesterase; NP_810988.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides thetaiotaomicron vpi-5482} (A:) Probab=23.82 E-value=49 Score=14.19 Aligned_cols=59 Identities=14% Similarity=0.022 Sum_probs=25.8 Q ss_pred EEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEE-ECCEEEEEEEEEEEEEE Q ss_conf 6676304511410233798579999998896307857999999999-99999999971069986 Q gi|254780460|r 104 GRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVK-VNGKEIYQANDLRVCLT 166 (172) Q Consensus 104 ~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~-vdg~~i~~a~~l~vgl~ 166 (172) .....-..++|++++.++++ ++.+..+..+ +......+-.+. .+|+++++++...+.+. T Consensus 59 ~~vv~~~~i~~~~~~~~~d~-v~v~t~~~~~---~~~~~~~~~~i~~~~g~~~~~~~~~~v~vd 118 (248) T 2ess_A 59 TWVLSRLAIELDEXPYQYEK-FSVQTWVENV---YRLFTDRNFAVIDKDGKKIGYARSVWAXIN 118 (248) T ss_dssp EEEEEEEEEEESCCCBTTCE-EEEEEEEEEE---CSSEEEEEEEEECTTSCEEEEEEEEEEEEE T ss_pred HHEEEEEEEEECCCCCCCCE-EEEEEEEEEC---CCCEEEEEEEEECCCCCEEEEEEEEEEEEE T ss_conf 31102113200047888988-9999999715---997799999999479839999999999997 No 95 >>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} (A:1-136) Probab=22.11 E-value=53 Score=13.98 Aligned_cols=29 Identities=10% Similarity=0.221 Sum_probs=20.3 Q ss_pred CEEEEEECCCCCEEEEEEEEEEEECCCCE Q ss_conf 11410233798579999998896307857 Q gi|254780460|r 112 IKFRGMVTPDCKLVEYGIDFKKILRGRVV 140 (172) Q Consensus 112 vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~ 140 (172) -...+.-.|.+.++.|+|++.++...+.+ T Consensus 107 ~g~~~~~ip~~s~l~f~iel~~i~~~~~~ 135 (136) T 1p5q_A 107 VGKEKFQIPPNAELKYELHLKSFEKAKES 135 (136) T ss_dssp TCBGGGTBCSSCCEEEEEEEEEEECCCCG T ss_pred CCCCCCCCCCCCEEEEEEEECCCCCCCCH T ss_conf 36876689975405899864022233453 No 96 >>2i3t_B Spindle assembly checkpoint component; WD40 protein, beta propeller, mitotic spindle checkpoint, cell cycle; 2.80A {Saccharomyces cerevisiae} (B:) Probab=20.29 E-value=56 Score=13.84 Aligned_cols=15 Identities=20% Similarity=0.472 Sum_probs=12.3 Q ss_pred CCCCCHHHHHHHCCC Q ss_conf 655898899984188 Q gi|254780460|r 5 KSSYTYEEILRCGEG 19 (172) Q Consensus 5 ~~~f~~~~i~~~~~g 19 (172) +..|+.|||+|.|.+ T Consensus 24 ~~Ef~~EEiLA~srn 38 (54) T 2i3t_B 24 RLEFSLEEVLAISRN 38 (54) T ss_dssp -CBCCHHHHHHHTTT T ss_pred CHHHHHHHHHHHHHH T ss_conf 124019999998750 Done!