Query         gi|254780460|ref|YP_003064873.1| 3-hydroxydecanoyl-(acyl carrier protein) dehydratase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 172
No_of_seqs    131 out of 1572
Neff          6.8 
Searched_HMMs 33803
Date          Wed Jun  1 13:03:57 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780460.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 >2cf2_C Fatty acid synthase, D 100.0       0       0  338.4  19.8  168    3-170   173-340 (342)
  2 >2cf2_C Fatty acid synthase, D 100.0       0       0  335.0  19.9  170    2-171     1-170 (342)
  3 >1mka_A Beta-hydroxydecanoyl t 100.0 5.8E-42       0  269.3  21.9  170    2-171     1-170 (171)
  4 >1z6b_A Pffabz, fatty acid syn 100.0 7.3E-32 2.2E-36  209.2  17.9  145    1-165     4-152 (154)
  5 >2gll_A FABZ, (3R)-hydroxymyri 100.0 7.7E-32 2.3E-36  209.1  16.3  146    1-169    17-171 (171)
  6 >1u1z_A (3R)-hydroxymyristoyl- 100.0 6.9E-31   2E-35  203.5  16.7  134   27-170    29-168 (168)
  7 >3d6x_A (3R)-hydroxymyristoyl- 100.0 4.5E-30 1.3E-34  198.6  16.4  135    8-165     2-143 (146)
  8 >3esi_A Uncharacterized protei 100.0 1.8E-29 5.2E-34  195.1  10.0  125   32-171     3-127 (129)
  9 >2prx_A Thioesterase superfami  99.1 1.1E-09 3.2E-14   77.5   9.4  126   28-165    10-151 (160)
 10 >2bi0_A Hypothetical protein R  99.0 1.4E-08 4.1E-13   70.9  12.4  142    4-165    11-161 (162)
 11 >2qwz_A Phenylacetic acid degr  98.7 3.4E-07   1E-11   62.7  10.9  133    2-163    18-154 (159)
 12 >1q6w_A Monoamine oxidase regu  98.6 3.7E-07 1.1E-11   62.4  10.0  139   29-169     7-159 (161)
 13 >1ixl_A Hypothetical protein P  98.5   4E-06 1.2E-10   56.3  11.6  121   28-170     7-128 (131)
 14 >3f1t_A Uncharacterized protei  98.3 1.7E-06 4.9E-11   58.6   7.2  130    9-163     2-137 (148)
 15 >3ir3_A HTD2, 3-hydroxyacyl-th  98.3 4.2E-06 1.3E-10   56.2   9.2  103   59-169    44-146 (148)
 16 >2f3x_A Transcription factor F  98.3 9.3E-05 2.8E-09   48.2  15.2  108   35-162     3-112 (118)
 17 >2h4u_A Thioesterase superfami  98.2 0.00011 3.4E-09   47.7  13.7  118   28-163    19-142 (145)
 18 >1iq6_A (R)-hydratase, (R)-spe  98.1 1.4E-05 4.3E-10   53.0   8.5   94   60-160    35-129 (134)
 19 >2f41_A Transcription factor F  98.1   9E-05 2.7E-09   48.3  12.2  108   36-161     7-114 (121)
 20 >2b3n_A Hypothetical protein A  98.0 6.1E-05 1.8E-09   49.3   9.4   90   61-161    66-155 (159)
 21 >2cwz_A Thioesterase family pr  97.6  0.0018 5.3E-08   40.6  11.8  108   54-165     9-118 (141)
 22 >2hbo_A Hypothetical protein (  97.5   0.004 1.2E-07   38.5  11.9  104   54-169    43-146 (158)
 23 >2pim_A Phenylacetic acid degr  97.4  0.0026 7.7E-08   39.6  10.5  111   37-163    26-136 (141)
 24 >2c2i_A RV0130; hotdog, hydrat  97.3  0.0011 3.3E-08   41.8   7.5  130   29-165    14-149 (151)
 25 >2uva_G Fatty acid synthase be  97.3 0.00083 2.4E-08   42.6   6.7   95   60-160   289-383 (388)
 26 >1yoc_A Hypothetical protein P  97.2   0.014 4.2E-07   35.2  12.4  116   31-163    25-143 (147)
 27 >1o0i_A Hypothetical protein H  97.0   0.026 7.6E-07   33.7  14.3  128    6-164     5-135 (138)
 28 >2fs2_A Phenylacetic acid degr  96.9    0.03   9E-07   33.3  12.9  117   29-165    14-133 (151)
 29 >3exz_A MAOC-like dehydratase;  96.7    0.03 8.9E-07   33.3  10.5   96   67-167    44-144 (154)
 30 >2uv8_G Fatty acid synthase su  96.7 6.6E-05   2E-09   49.1  -3.2  117   31-160   259-378 (383)
 31 >3gek_A Putative thioesterase   96.6   0.049 1.5E-06   32.0  13.6  108   49-166    24-132 (146)
 32 >1zki_A Hypothetical protein P  96.5   0.057 1.7E-06   31.6  13.4  117   29-163    11-129 (133)
 33 >3f5o_A Thioesterase superfami  96.5   0.065 1.9E-06   31.3  13.2  119   29-165    19-139 (148)
 34 >2bi0_A Hypothetical protein R  96.4   0.066 1.9E-06   31.3  12.2   98   64-168    53-159 (175)
 35 >1wlu_A PAAI protein, phenylac  95.8    0.14 4.2E-06   29.3  10.7   99   53-165    19-117 (136)
 36 >1s9c_A Peroxisomal multifunct  95.5   0.046 1.4E-06   32.2   6.5   89   61-160   197-285 (298)
 37 >3khp_A MAOC family protein; s  95.4   0.066   2E-06   31.3   6.7   92   61-160   211-304 (311)
 38 >1pn2_A Peroxisomal hydratase-  95.3   0.067   2E-06   31.2   6.6   47  108-160   224-270 (280)
 39 >3kg8_A CURJ; polyketide synth  95.3    0.22 6.4E-06   28.2  12.5  124   31-171   179-305 (308)
 40 >3kg7_A CURH; polyketide synth  95.2    0.14 4.2E-06   29.3   8.2  122   31-168   165-288 (293)
 41 >2ov9_A Hypothetical protein;   94.9    0.28 8.2E-06   27.6   9.3  101   53-166   110-211 (216)
 42 >3e29_A Uncharacterized protei  94.7    0.32 9.3E-06   27.2  11.6  117   31-165    15-134 (144)
 43 >3kg6_A CURF; polyketide synth  94.6    0.32 9.5E-06   27.2   8.9   76   53-134    18-96  (285)
 44 >1q4t_A Thioesterase; hot-DOG,  94.6    0.33 9.8E-06   27.1  13.3  118   31-166    27-148 (151)
 45 >2vz8_A Fatty acid synthase; t  93.5    0.36 1.1E-05   26.9   6.9   73   55-130    30-104 (277)
 46 >3kg9_A CURK; polyketide synth  93.4    0.56 1.6E-05   25.8   7.9   74   54-133    24-100 (296)
 47 >2eis_A Hypothetical protein T  93.2    0.61 1.8E-05   25.5  10.0  101   55-166     4-111 (133)
 48 >3kg7_A CURH; polyketide synth  93.1    0.37 1.1E-05   26.8   6.5   60   28-93      3-64  (293)
 49 >1sh8_A Hypothetical protein P  91.4       1   3E-05   24.2   9.1  122   31-168    17-150 (154)
 50 >1vh9_A P15, hypothetical prot  91.3       1 3.1E-05   24.1  13.8  118   29-164    17-137 (149)
 51 >3e8p_A Uncharacterized protei  91.2     1.1 3.2E-05   24.1  10.5  115   29-160    28-159 (164)
 52 >2oiw_A Putative 4-hydroxybenz  89.9     1.4 4.1E-05   23.4  12.4  107   57-169     7-113 (136)
 53 >1y7u_A Acyl-COA hydrolase; st  89.9     1.4 4.1E-05   23.4  11.1  103   53-166    18-126 (156)
 54 >2gf6_A Conserved hypothetical  88.2     1.8 5.4E-05   22.7  11.3  107   56-168     8-117 (135)
 55 >3hrq_A PKS, aflatoxin biosynt  88.1     1.9 5.5E-05   22.6  12.5  117   31-164   199-320 (357)
 56 >1vh5_A Hypothetical protein Y  87.9     1.9 5.7E-05   22.5  14.6  119   29-165    17-138 (148)
 57 >1t82_A Hypothetical acetyltra  87.7       2 5.8E-05   22.5  11.1  110   39-166    35-152 (155)
 58 >1z54_A Probable thioesterase;  87.7       2 5.9E-05   22.5   9.7   66  100-169    49-114 (132)
 59 >3bnv_A CJ0977; virulence fact  87.1     2.2 6.4E-05   22.3  13.3  118   29-168    26-146 (152)
 60 >2egj_A Hypothetical protein A  86.8     2.2 6.6E-05   22.1  10.1  105   58-168     6-113 (128)
 61 >3d6l_A Putative hydrolase; ho  85.5     2.6 7.7E-05   21.8  11.6  100   55-165     7-115 (120)
 62 >2cye_A Conserved hypothetical  85.1     2.7 8.1E-05   21.6  11.2  105   56-167     7-111 (133)
 63 >1s5u_A Protein YBGC; structur  84.5     2.9 8.5E-05   21.5   9.0  109   55-169     8-120 (125)
 64 >2qq2_A Cytosolic acyl coenzym  83.1     3.3 9.8E-05   21.1   6.0   92   50-152    38-129 (193)
 65 >3bjk_A Acyl-COA thioester hyd  82.7     3.4  0.0001   21.1   9.1  105   50-165    11-124 (153)
 66 >2w3x_A CALE7; hydrolase, hotd  79.6     4.4 0.00013   20.4   9.8  108   55-168     7-120 (147)
 67 >3dkz_A Thioesterase superfami  78.3     4.9 0.00014   20.1  13.7  115   31-165    12-129 (142)
 68 >3el6_A Erythromycin dehydrata  76.3     5.6 0.00016   19.8   9.2   53   34-92     37-91  (313)
 69 >2hx5_A Hypothetical protein;   76.3     5.6 0.00016   19.8   9.1   65  101-169    63-127 (152)
 70 >2v1o_A Cytosolic acyl coenzym  76.2     5.6 0.00016   19.8  11.7   64  102-169    46-115 (151)
 71 >2gvh_A AGR_L_2016P; 15159470,  75.6     5.8 0.00017   19.7  10.3  101   54-165    28-134 (155)
 72 >2fuj_A Conserved hypothetical  73.7     6.5 0.00019   19.4  11.6  108   55-168    11-121 (137)
 73 >2gvh_A AGR_L_2016P; 15159470,  69.9     7.9 0.00023   18.9  12.1  102   53-165     3-110 (133)
 74 >2q78_A Uncharacterized protei  67.9     8.7 0.00026   18.6  11.7  104   55-163    24-129 (132)
 75 >2q2b_A Cytosolic acyl coenzym  65.3     9.8 0.00029   18.3   7.0   92   50-152    22-113 (179)
 76 >3hdu_A Putative thioesterase;  64.2      10 0.00031   18.2   8.8   53  104-161   100-153 (157)
 77 >2o5u_A Thioesterase; putative  61.4      12 0.00034   17.9  11.2  108   55-168    15-125 (148)
 78 >1vpm_A Acyl-COA hydrolase; NP  57.8      13  0.0004   17.5  10.0   88   53-151    22-109 (169)
 79 >3ck1_A Putative thioesterase;  55.7      15 0.00043   17.3  10.2  108   55-168     6-119 (150)
 80 >3e1e_A Thioesterase family pr  53.1      16 0.00048   17.1  14.1  109   39-165    27-139 (141)
 81 >2oaf_A Thioesterase superfami  51.5      17  0.0005   16.9  11.6  107   56-168    18-130 (151)
 82 >3hm0_A Probable thioesterase;  48.8      19 0.00056   16.7  13.6  106   56-167    38-150 (167)
 83 >3b7k_A Acyl-coenzyme A thioes  47.4      20 0.00059   16.5   9.5  108   29-152   179-286 (333)
 84 >2ali_A Hypothetical protein P  44.2      22 0.00066   16.2  12.2  108   55-168    30-140 (158)
 85 >2own_A Putative oleoyl-[acyl-  43.2      23 0.00068   16.1   8.4   52  110-165   205-257 (262)
 86 >2ccw_A Azurin II, AZN-2; elec  40.7     3.4 9.9E-05   21.1  -1.5   12   64-75    106-117 (129)
 87 >2nuj_A Thioesterase superfami  40.1      26 0.00076   15.8  13.4  108   55-168    27-138 (163)
 88 >1tbu_A Peroxisomal acyl-coenz  37.2      29 0.00085   15.6   8.9   47  109-159    65-111 (118)
 89 >3hhd_A Fatty acid synthase; t  32.3      11 0.00033   18.0   0.0   68   62-132   155-224 (249)
 90 >1njk_A Hypothetical protein Y  28.8      40  0.0012   14.7  10.5  109   55-169    23-135 (156)
 91 >2hlj_A Hypothetical protein;   27.6      42  0.0012   14.6  10.5  105   58-168     9-118 (157)
 92 >3bbj_A Putative thioesterase   27.3      42  0.0012   14.6   6.8   44  111-159    62-105 (272)
 93 >3cjy_A Putative thioesterase;  26.9      43  0.0013   14.5   7.3   53  110-167    59-111 (259)
 94 >2ess_A Acyl-ACP thioesterase;  23.8      49  0.0015   14.2   8.9   59  104-166    59-118 (248)
 95 >1p5q_A FKBP52, FK506-binding   22.1      53  0.0016   14.0   2.3   29  112-140   107-135 (136)
 96 >2i3t_B Spindle assembly check  20.3      56  0.0017   13.8   1.8   15    5-19     24-38  (54)

No 1  
>>2cf2_C Fatty acid synthase, DH domain; transferase, fatty acid metabolism, fatty acid biosynthesis, multienzyme; 4.30A {Sus scrofa} (C:)
Probab=100.00  E-value=0  Score=338.39  Aligned_cols=168  Identities=55%  Similarity=1.079  Sum_probs=121.2

Q ss_pred             CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHH
Q ss_conf             88655898899984188355799888998641225689999718441342357887507865530045568995211275
Q gi|254780460|r    3 NRKSSYTYEEILRCGEGEMFGEGNAQLPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCL   82 (172)
Q Consensus         3 ~~~~~f~~~~i~~~~~g~~fg~~~~rLP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL   82 (172)
                      .++.++++++++++++|++|++..+|||++||||||||+++++++|++++|+++|+|+|++|||||+||||++|||||||
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~Lp~~p~l~iDrv~~i~~~~g~~~~g~i~a~k~v~~dewff~gHf~~~PvmPG~L  252 (342)
T 2cf2_C          173 DKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMTETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCL  252 (342)
T ss_pred             CCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCEECCCCCCCEECCCHH
T ss_conf             55666560210013453114799888899872317889999169983235369999842766544737898870746189


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEE
Q ss_conf             78887998864012334688266763045114102337985799999988963078579999999999999999997106
Q gi|254780460|r   83 GLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLR  162 (172)
Q Consensus        83 ~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~  162 (172)
                      ++|||+|++++++.+.+.+...++.++++||||++|+|||++++|+++|+++..++.++++++|+++|||++||++++++
T Consensus       253 ~iEa~~Q~~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~l~~~~~i~~v~~~~~~~~~~~g~~~vdg~~i~~~~~~~  332 (342)
T 2cf2_C          253 GLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASDLK  332 (342)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCCEEEEEEEEEEEEEECCCEEEEEEEEEEECCEEEEEEEEEE
T ss_conf             99999999877630136788157710576289358706998999999999975078259999999999999999998349


Q ss_pred             EEEECCCC
Q ss_conf             99861768
Q gi|254780460|r  163 VCLTIDRG  170 (172)
Q Consensus       163 vgl~~de~  170 (172)
                      +++++|+.
T Consensus       333 ~~~~~~~~  340 (342)
T 2cf2_C          333 VGLFQDTS  340 (342)
T ss_pred             EEEEECCC
T ss_conf             99994677


No 2  
>>2cf2_C Fatty acid synthase, DH domain; transferase, fatty acid metabolism, fatty acid biosynthesis, multienzyme; 4.30A {Sus scrofa} (C:)
Probab=100.00  E-value=0  Score=335.00  Aligned_cols=170  Identities=55%  Similarity=1.063  Sum_probs=163.1

Q ss_pred             CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHH
Q ss_conf             88865589889998418835579988899864122568999971844134235788750786553004556899521127
Q gi|254780460|r    2 KNRKSSYTYEEILRCGEGEMFGEGNAQLPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGC   81 (172)
Q Consensus         2 ~~~~~~f~~~~i~~~~~g~~fg~~~~rLP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGv   81 (172)
                      +|+++|||+|||++||+|+.|||.++|||+|||||||||+++++++|++++|+++|||+|++|+|||+||||++|+||||
T Consensus         1 ~~k~~~f~~~~ll~~a~G~~fg~~~~RLP~pP~LlVDRV~~id~~~g~~~~G~i~ae~dV~~D~wyf~~hf~~~pvmPg~   80 (342)
T 2cf2_C            1 VDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMTETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGC   80 (342)
T ss_pred             CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCCC
T ss_conf             98657999999997549971799988899998699998789926898524259999986799866532787799714523


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEE
Q ss_conf             57888799886401233468826676304511410233798579999998896307857999999999999999999710
Q gi|254780460|r   82 LGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDL  161 (172)
Q Consensus        82 L~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l  161 (172)
                      |++||++|++++++.+.+.+...+.+.+++++||++|.|++++++|+++++++.+++..+.+++|++++||+++++++++
T Consensus        81 l~iEa~~Q~~~~l~~~~g~~~~~~~l~~~~v~frg~v~p~~~~L~~~v~i~~~~~~~~~~~~~dg~~~vdG~~v~~~~~~  160 (342)
T 2cf2_C           81 LGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASDL  160 (342)
T ss_pred             HHHHHHHHHHHHHEECCCCCCCEEEEECCEEEECCCCCCCCEEEEEEEEEEEEEECCEEEEEEEEEEEECCEEEEEECCC
T ss_conf             28899998765530014788732676623046834119998499999999999806717999979999899997885155


Q ss_pred             EEEEECCCCC
Q ss_conf             6998617688
Q gi|254780460|r  162 RVCLTIDRGV  171 (172)
Q Consensus       162 ~vgl~~de~~  171 (172)
                      +++++.+...
T Consensus       161 ~a~~~~~~~~  170 (342)
T 2cf2_C          161 KVGLFQDTSA  170 (342)
T ss_pred             CEEECCCCCC
T ss_conf             2020123422


No 3  
>>1mka_A Beta-hydroxydecanoyl thiol ester dehydrase; fatty acid biosynthesis; HET: DAC; 2.00A {Escherichia coli} (A:)
Probab=100.00  E-value=5.8e-42  Score=269.29  Aligned_cols=170  Identities=55%  Similarity=1.063  Sum_probs=161.2

Q ss_pred             CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHH
Q ss_conf             88865589889998418835579988899864122568999971844134235788750786553004556899521127
Q gi|254780460|r    2 KNRKSSYTYEEILRCGEGEMFGEGNAQLPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGC   81 (172)
Q Consensus         2 ~~~~~~f~~~~i~~~~~g~~fg~~~~rLP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGv   81 (172)
                      +|+|++||+++|+++++|..|++=-++||.+||+|||||++++++++.++.++++|+|+|++|+|||+||||++|+|||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~i~~~LP~~p~l~vDrV~~~~~~~~~~~~~~i~~~~~v~~d~~~~~~hf~g~pvlPg~   80 (171)
T 1mka_A            1 VDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMTETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGC   80 (171)
T ss_dssp             CCCCSCBCHHHHHHHHTTCSSCSSSCCCCCTTTCCCSEEEEEESSCTTTTSCEEEEEEECCTTSGGGGTTTTTSCCCCHH
T ss_pred             CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCHH
T ss_conf             98657999999997549966889988899998783798899808998556655999984155510683046899758649


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEE
Q ss_conf             57888799886401233468826676304511410233798579999998896307857999999999999999999710
Q gi|254780460|r   82 LGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDL  161 (172)
Q Consensus        82 L~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l  161 (172)
                      +++|+|+|++++++.+......+++.++.++||+++|.||+++.++.+.++++.+.+..+++++++++|||+++++++.+
T Consensus        81 l~iE~~aQ~~~~~~~~~~~~~~~~l~~~~~~kf~~~v~PGd~l~~~~~~~~~~~~~~~~~~~~~~~~~v~g~~v~~~~~~  160 (171)
T 1mka_A           81 LGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASDL  160 (171)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCSEEEEEEESCEEECSCCCTTCCEEEEEEEEEEEEESSSEEEEEEEEEEETTEEEEEEEEE
T ss_pred             HHHHHHHHHHHHEEEECCCCCCEEEEECCEEEEECCCCCCCEEEEEEEEEEEEEECCCEEEEEEEEEEECCEEEEEEECC
T ss_conf             99999998852206820789836787422316834522199899999999999725738999999999899999999578


Q ss_pred             EEEEECCCCC
Q ss_conf             6998617688
Q gi|254780460|r  162 RVCLTIDRGV  171 (172)
Q Consensus       162 ~vgl~~de~~  171 (172)
                      ++.++++++.
T Consensus       161 ~~~~~~~~~~  170 (171)
T 1mka_A          161 KVGLFQDTSA  170 (171)
T ss_dssp             EEEEESCCTT
T ss_pred             EEEEEECCCC
T ss_conf             9999846877


No 4  
>>1z6b_A Pffabz, fatty acid synthesis protein; malaria, beta-hydroxyacyl-ACP dehydratase, fatty acid biosynthesis, SAD phasing, lyase; 2.09A {Plasmodium falciparum} (A:)
Probab=100.00  E-value=7.3e-32  Score=209.25  Aligned_cols=145  Identities=22%  Similarity=0.352  Sum_probs=126.7

Q ss_pred             CCCCCCCCCHHHHHHHCCCCCCCCCCCCCC-CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEE
Q ss_conf             988865589889998418835579988899-8641225689999718441342357887507865530045568995211
Q gi|254780460|r    1 MKNRKSSYTYEEILRCGEGEMFGEGNAQLP-KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMP   79 (172)
Q Consensus         1 ~~~~~~~f~~~~i~~~~~g~~fg~~~~rLP-~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmP   79 (172)
                      |.+++.++++++|.++            || ++||+|+|+|+++++++      .++++++|++|+|||+||||++|+||
T Consensus         4 m~~~~~~~~~~~i~~~------------lPhr~p~l~vD~i~~~~~~~------~~~~~~~v~~d~~~~~~hf~~~pi~P   65 (154)
T 1z6b_A            4 MPNYDTSIDIEDIKKI------------LPHRYPFLLVDKVIYMQPNK------TIIGLKQVSTNEPFFNGHFPQKQIMP   65 (154)
T ss_dssp             ----CCCBCHHHHHHH------------CCCCTTSCCCCEEEEEETTT------EEEEEEECCTTSGGGGTSCTTSCCCC
T ss_pred             CCCCCCCCCHHHHHHH------------CCCCCCEEEEEEEEEEECCC------EEEEEEECCCCCCEEEECCCCCCCCH
T ss_conf             9999987599999986------------79999847899999981796------79999982676435650567753026


Q ss_pred             HHHHHHHHHHHHHHHCCCCCC---CCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEE
Q ss_conf             275788879988640123346---88266763045114102337985799999988963078579999999999999999
Q gi|254780460|r   80 GCLGLDALWQLTGFFLGWLGE---LGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIY  156 (172)
Q Consensus        80 GvL~iEa~~Ql~~~~~~~~~~---~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~  156 (172)
                      |++++|+|+|++++++.....   ...+++.++.++||+++|.|||+ ++++++++++... ..++.++++++|||++++
T Consensus        66 g~l~iE~~aQ~~~~~~~~~~~~~~~~~~~l~~v~~~kf~~~v~pGd~-L~~~v~~~~~~~~-~~~~~~~~~~~v~g~~v~  143 (154)
T 1z6b_A           66 GVLQIEALAQLAGILCLKSDDSQKNNLFLFAGVDGVRWKKPVLPGDT-LTMQANLISFKSS-LGIAKLSGVGYVNGKVVI  143 (154)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC----CCCEEEEEEEEEEECSCCCTTCE-EEEEEEEEEEETT-TTEEEEEEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEEEECCCE-EEEEEEEEEEECC-CCEEEEEEEEEECCEEEE
T ss_conf             78999999877767665155334682899984012099300754879-9999999997067-629999999999999999


Q ss_pred             EEEEEEEEE
Q ss_conf             997106998
Q gi|254780460|r  157 QANDLRVCL  165 (172)
Q Consensus       157 ~a~~l~vgl  165 (172)
                      +++...+..
T Consensus       144 ~~~~~~~~~  152 (154)
T 1z6b_A          144 NISEMTFAL  152 (154)
T ss_dssp             EEEEEEEEE
T ss_pred             EEEEEEEEE
T ss_conf             925159999


No 5  
>>2gll_A FABZ, (3R)-hydroxymyristoyl-acyl carrier protein dehydratase; lyase; 2.20A {Helicobacter pylori} PDB: 2glm_A* 2glp_A* 2glv_A 3dp1_A* 3cf8_A* 3cf9_A* 3d04_A* 3doy_A* 3doz_A* 3dp0_A* 3b7j_A* 3dp2_A* 3dp3_A* 3ed0_A* (A:)
Probab=100.00  E-value=7.7e-32  Score=209.13  Aligned_cols=146  Identities=29%  Similarity=0.425  Sum_probs=123.3

Q ss_pred             CCCCCCCCCHHHHHHHCCCCCCCCCCCCCC-CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEE
Q ss_conf             988865589889998418835579988899-8641225689999718441342357887507865530045568995211
Q gi|254780460|r    1 MKNRKSSYTYEEILRCGEGEMFGEGNAQLP-KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMP   79 (172)
Q Consensus         1 ~~~~~~~f~~~~i~~~~~g~~fg~~~~rLP-~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmP   79 (172)
                      +.++..++++++|.++            || ++||+|||||+++++++      .++++++|+.|+|||+||||++|+||
T Consensus        17 ~~~~~~~~~~~~i~~~------------lPhr~P~l~iD~i~~~~~~~------~i~~~~~v~~d~~~~~ghf~~~pv~P   78 (171)
T 2gll_A           17 HQNLQSQFFIEHILQI------------LPHRYPMLLVDRITELQANQ------KIVAYKNITFNEDVFNGHFPNKPIFP   78 (171)
T ss_dssp             ---CCSCEEHHHHHHH------------CCCCTTSCCCCEEEEEETTT------EEEEEEECCSCSTHHHHSCTTSCCCC
T ss_pred             HHCCCCCCCHHHHHHH------------CCCCCCEEEEEEEEEECCCC------EEEEEEEECCCCCEEECCCCCCCEEE
T ss_conf             2220357599999986------------89999849899999982898------79999985688866733678997874


Q ss_pred             HHHHHHHHHHHHHHHCCCCC--------CCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEEC
Q ss_conf             27578887998864012334--------6882667630451141023379857999999889630785799999999999
Q gi|254780460|r   80 GCLGLDALWQLTGFFLGWLG--------ELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVN  151 (172)
Q Consensus        80 GvL~iEa~~Ql~~~~~~~~~--------~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vd  151 (172)
                      ||+++|+|+|++++++.+..        ....+++.++.++||+++|.||++ +++++++.   ..+..++++++++++|
T Consensus        79 gvlliE~~aQ~~~~~~~~~~~~~~~~~~~~~~g~l~~i~~~~f~~~v~pGd~-l~~~~~~~---~~~~~~~~~~~~~~v~  154 (171)
T 2gll_A           79 GVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDR-LEYHLEVL---KHKGMIWQVGGTAQVD  154 (171)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCSCHHHHTTEEEEEEEEEEEEECSCCCTTCE-EEEEEEEE---EESSSEEEEEEEEEET
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCE-EEEEEEEE---EEECCEEEEEEEEEEC
T ss_conf             6889999999988997551255421256773468740104789663299988-99999999---9768899999999999


Q ss_pred             CEEEEEEEEEEEEEECCC
Q ss_conf             999999971069986176
Q gi|254780460|r  152 GKEIYQANDLRVCLTIDR  169 (172)
Q Consensus       152 g~~i~~a~~l~vgl~~de  169 (172)
                      |+++++++ +.+.+.++|
T Consensus       155 g~~va~g~-l~~~~~~~e  171 (171)
T 2gll_A          155 GKVVAEAE-LKAMIAERE  171 (171)
T ss_dssp             TEEEEEEE-EEEEEEECC
T ss_pred             CEEEEEEE-EEEEEECCC
T ss_conf             99999999-999997589


No 6  
>>1u1z_A (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; fatty acid biosynthesis, hot DOG fold, lyase; 2.50A {Pseudomonas aeruginosa} (A:)
Probab=99.97  E-value=6.9e-31  Score=203.46  Aligned_cols=134  Identities=22%  Similarity=0.298  Sum_probs=112.3

Q ss_pred             CCCC-CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCC-----CCC
Q ss_conf             8899-8641225689999718441342357887507865530045568995211275788879988640123-----346
Q gi|254780460|r   27 AQLP-KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGW-----LGE  100 (172)
Q Consensus        27 ~rLP-~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~-----~~~  100 (172)
                      +.|| ++||+|||||++++..++     .++++++|++|+|||+||||++|+||||+++|+|+|++++++.+     ...
T Consensus        29 ~~lPhr~P~llvD~i~~~~~~~~-----~~~~~~~v~~~~~~~~~hf~~~pv~Pg~l~iE~~aQ~~~~~~~~~~~~~~~~  103 (168)
T 1u1z_A           29 EYLPHRYPFLLVDRVVELDIEGK-----RIRAYKNVSINEPFFNGHFPEHPIXPGVLIIEAXAQAAGILGFKXLDVKPAD  103 (168)
T ss_dssp             TTCCCCTTSCCCCEEEEEETTTT-----EEEEEEECCTTSTTGGGSCTTSCCCCHHHHHHHHHHHHHHHHHHHHTCCC--
T ss_pred             HHCCCCCCEEEEEEEEEEECCCC-----EEEEEEEECCCCCEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             86899998698999999805998-----8999999778853462466886168766688999999999886412555788


Q ss_pred             CCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEECCCC
Q ss_conf             8826676304511410233798579999998896307857999999999999999999710699861768
Q gi|254780460|r  101 LGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTIDRG  170 (172)
Q Consensus       101 ~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~de~  170 (172)
                      ...+++.++.++||+++|.||++ +++++++++   .+..++++++++++||+++++++ +.+.+.++++
T Consensus       104 ~~~~~l~~i~~~~f~~~v~pGd~-L~i~~~~~~---~~~~~~~~~~~~~~~g~~va~g~-l~~~~~~~~e  168 (168)
T 1u1z_A          104 GTLYYFVGSDKLRFRQPVLPGDQ-LQLHAKFIS---VKRSIWKFDCHATVDDKPVCSAE-IICAERKLGS  168 (168)
T ss_dssp             -CEEEEEEEEEEEECSCCCTTCE-EEEEEEEEE---EETTEEEEEEEEEETTEEEEEEE-EEEEEEC---
T ss_pred             CCEEEEEECCEEEEEEEECCCCE-EEEEEEEEE---EECCEEEEEEEEEECCEEEEEEE-EEEEEECCCC
T ss_conf             83999972458999004148999-999999999---65899999999999999999999-9999713689


No 7  
>>3d6x_A (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; FABZ, hot DOG fold, cytoplasm, lipid A biosynthesis, lipid synthesis; HET: MSE; 2.59A {Campylobacter jejuni subsp} (A:)
Probab=99.97  E-value=4.5e-30  Score=198.61  Aligned_cols=135  Identities=26%  Similarity=0.343  Sum_probs=113.7

Q ss_pred             CCHHHHHHHCCCCCCCCCCCCCC-CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHH
Q ss_conf             89889998418835579988899-86412256899997184413423578875078655300455689952112757888
Q gi|254780460|r    8 YTYEEILRCGEGEMFGEGNAQLP-KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDA   86 (172)
Q Consensus         8 f~~~~i~~~~~g~~fg~~~~rLP-~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa   86 (172)
                      .|.++|.++            || ++||+|||||+++++++      +++|+++|++|+|||+||||++|+|||++++|+
T Consensus         2 m~~~~I~~~------------lPhr~pml~vD~v~~~~~~~------~i~~~~~v~~d~~~~~~hf~~~p~lPg~l~iE~   63 (146)
T 3d6x_A            2 IDVXQIQEI------------LPHRYPFLLVDKITELKVKE------VVLGYKNISISDHVFXGHFPGHPIYPGVLILEG   63 (146)
T ss_dssp             BCHHHHHHH------------CCCCTTSCCCCEEEEEETTT------EEEEEEECCTTBTHHHHSCTTSCCCCHHHHHHH
T ss_pred             CCHHHHHHH------------CCCCCCEEEEEEEEEECCCC------EEEEEEEECCCCCEEEECCCCCCCCCEEHHHHH
T ss_conf             897999986------------89998939899999982998------899999944788678622699975101358999


Q ss_pred             HHHHHHHHCCCCCC------CCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEE
Q ss_conf             79988640123346------882667630451141023379857999999889630785799999999999999999971
Q gi|254780460|r   87 LWQLTGFFLGWLGE------LGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQAND  160 (172)
Q Consensus        87 ~~Ql~~~~~~~~~~------~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~  160 (172)
                      |+|++++++.+...      +...++.++.++||+++|.||+++ ++++++.+   .....+.+++++++||+++++++ 
T Consensus        64 ~aQ~~~~~~~~~~~~~~~~~~~~~~l~~v~~~~f~~~v~pG~~l-~i~~~~~~---~~~~~~~~~~~~~v~g~~i~~g~-  138 (146)
T 3d6x_A           64 XAQTGGVLAFESXEDKVDPKSKVVYFTGIDGAKFRNPVRPGDRL-DYEXSVVK---NRGNXWIFKGQAFVDGNLVAEAE-  138 (146)
T ss_dssp             HHHHHHHHHHTC-------CCSCEEEEEEEEEEECSCCCTTCEE-EEEEEEEE---EETTEEEEEEEEEETTEEEEEEE-
T ss_pred             HHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEECCCCCCEEE-EEEEEEEE---EECCEEEEEEEEEECCEEEEEEE-
T ss_conf             99999999743244444777727998514016882430354699-99999998---01899999999999999999999-


Q ss_pred             EEEEE
Q ss_conf             06998
Q gi|254780460|r  161 LRVCL  165 (172)
Q Consensus       161 l~vgl  165 (172)
                      +.+.+
T Consensus       139 l~~~~  143 (146)
T 3d6x_A          139 LKAXI  143 (146)
T ss_dssp             EEEEE
T ss_pred             EEEEE
T ss_conf             99999


No 8  
>>3esi_A Uncharacterized protein; protein from erwinia carotovora subsp. atroseptica (pectobacterium atrosepticum), structural genomics; 2.50A {Pectobacterium atrosepticum} (A:)
Probab=99.96  E-value=1.8e-29  Score=195.09  Aligned_cols=125  Identities=20%  Similarity=0.371  Sum_probs=108.9

Q ss_pred             CCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
Q ss_conf             64122568999971844134235788750786553004556899521127578887998864012334688266763045
Q gi|254780460|r   32 PPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSN  111 (172)
Q Consensus        32 ~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~  111 (172)
                      |||+|||||+++++++      .++++|+|++|+|||+||||++||||||+++|+++|+++.++.     ..+.+.++++
T Consensus         3 P~~l~iD~v~~~~~~~------~~~~~~~v~~d~~~f~gHfp~~PvlPGvl~lE~~~Q~~~~~~~-----~~~~~~~~~~   71 (129)
T 3esi_A            3 PVELVRHDVKKTDETS------QVELMLQVDPDLFWFNGHFTGQPLLPGVAQLDWVMHYATTVLA-----QGWTFLSIEN   71 (129)
T ss_dssp             CEEEEECCCCCCSSEE------EEEEEEECCTTSGGGCTTTBSSCCCCHHHHHHHHHHHHHHHTC-----TTEEEEEEEE
T ss_pred             CHHHHHCEEEECCCCC------EEEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHH-----CCHHHHHHCC
T ss_conf             4333124134327775------7999998089885268748899818489999999999998743-----2221210100


Q ss_pred             CEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEECCCCC
Q ss_conf             114102337985799999988963078579999999999999999997106998617688
Q gi|254780460|r  112 IKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTIDRGV  171 (172)
Q Consensus       112 vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~de~~  171 (172)
                      +||+++|.||++ +++++++   ...+...+++++++++||++++++.++.+++++++..
T Consensus        72 ~kf~~~v~Pgd~-l~~~~~~---~~~~~~~~~~~~~~~~~g~~v~~~~~l~~~~~~~~~~  127 (129)
T 3esi_A           72 IKFQQPILPGKT-LRLVLIW---HAGKQSLTFSYSILEGDTERTASSGKIKLTPIMEDNP  127 (129)
T ss_dssp             EEECSCCCTTCE-EEEEEEE---ETTTTEEEEEEEEEETTEEEEEEEEEEEEEETTC---
T ss_pred             EEECCCCCCCCE-EEEEEEE---EECCCEEEEEEEEEEEECCEEEEEEEEEECCCCCCCC
T ss_conf             378265289999-9999999---9636708999999993099999999999344278889


No 9  
>>2prx_A Thioesterase superfamily protein; ZP_00837258.1, structural genomics, joint center for structural genomics, JCSG; 1.50A {Shewanella loihica pv-4} (A:)
Probab=99.07  E-value=1.1e-09  Score=77.48  Aligned_cols=126  Identities=10%  Similarity=-0.086  Sum_probs=92.7

Q ss_pred             CCC-CCCCEEE--------EEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCC
Q ss_conf             899-8641225--------6899997184413423578875078655300455689952112757888799886401233
Q gi|254780460|r   28 QLP-KPPMLMF--------HRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWL   98 (172)
Q Consensus        28 rLP-~~p~lmi--------DrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~   98 (172)
                      +|| +.|++++        ++++++.+++      ++++...|.+  ++..+|++-.+.++.+++.|++.|++.+++...
T Consensus        10 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~v~~--~~~~~~g~v~gg~~~~~~d~a~~~~~~~~~~~~   81 (160)
T 2prx_A           10 AYPDDLSHCYGCGRNNEQGHQLKSYWRGE------QTIAHFXPKP--FHTAIPGFVYGGLIASLIDCHGTGSASAAAQRA   81 (160)
T ss_dssp             TC----CCSCC----------CCCEEETT------EEEEEECCCT--TCBSSTTBBCHHHHHHHHHHHHHHHHHHHHC--
T ss_pred             HCCCCCCCEEEECCCCCCCCEEEEEECCC------EEEEEEEECH--HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             67988997889289999857668996299------9999999698--996999964575899999999999999863010


Q ss_pred             C-------CCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEE
Q ss_conf             4-------688266763045114102337985799999988963078579999999999999999997106998
Q gi|254780460|r   99 G-------ELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCL  165 (172)
Q Consensus        99 ~-------~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl  165 (172)
                      .       ......+....+++|++++.+||.+ +++.++.+   .++...+++++++++|+++++++-..+.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~i~f~~pv~~Gd~l-~~~~~v~~---~g~~~~~~~~~v~~~~~~va~a~~t~v~~  151 (160)
T 2prx_A           82 LEQAGEQLDEPPRFVTAALNIDYLAPTPXGVEL-ELVGEIKE---VKPRKVVVEIALSADGKLCARGHXVAVKX  151 (160)
T ss_dssp             -----------CCEEEEEEEEEECSCCBTTSCE-EEEEEEEE---C--CEEEEEEEEEC---CCEEEEEEEEEC
T ss_pred             CCCCCCCCCCCCCEEEEEEEEEEEECCCCCCEE-EEEEEEEE---ECCCEEEEEEEEEECCEEEEEEEEEEEEC
T ss_conf             244334456777259999899990055899869-99999999---57979999999999999999989999995


No 10 
>>2bi0_A Hypothetical protein RV0216; conserved hypothetical, hotdog-fold, structural proteomics in europe, spine, structural genomics; 1.9A {Mycobacterium tuberculosis} (A:176-337)
Probab=98.99  E-value=1.4e-08  Score=70.94  Aligned_cols=142  Identities=5%  Similarity=-0.099  Sum_probs=101.9

Q ss_pred             CCCCCCHHHHHHHCCCCCCCCCCCCCC-CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHH
Q ss_conf             865589889998418835579988899-8641225689999718441342357887507865530045568995211275
Q gi|254780460|r    4 RKSSYTYEEILRCGEGEMFGEGNAQLP-KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCL   82 (172)
Q Consensus         4 ~~~~f~~~~i~~~~~g~~fg~~~~rLP-~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL   82 (172)
                      .-.+++.+++...            +| +-|..+++..+...+.-..... .+.+.-.-+.|.+++..||.+.|++||++
T Consensus        11 ~~~~~~~~~~~~~------------~p~r~~~~~~~G~~~~~~~~t~~~~-~~~~~~sgD~npiH~d~~~~~~~i~~G~l   77 (162)
T 2bi0_A           11 PTAHWDGAVFRKR------------VPGPHFDAGIAGAVLHSTADLVSGA-PELARLTLNIAATHHDWRVSGRRLVYGGH   77 (162)
T ss_dssp             TTTTCCHHHHHHH------------SCSCCCCGGGTTCEEECCCEECCCH-HHHHHHTTCCCGGGTCTTTTSSCCCCHHH
T ss_pred             CCCCCCHHHCCCC------------CCCCCCCCCCCEEEEECCCCEEECH-HHHHHHHCCCCHHHCCCCHHCCCCCCCCC
T ss_conf             5344552230245------------8876455214518974487555230-78998747755112570220362201320


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEEC-CCCEEEEEEEEEEE-------CCEE
Q ss_conf             788879988640123346882667630451141023379857999999889630-78579999999999-------9999
Q gi|254780460|r   83 GLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILR-GRVVLGAADGWVKV-------NGKE  154 (172)
Q Consensus        83 ~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~-~~~~~~~~~g~~~v-------dg~~  154 (172)
                      .+..+.++..-.     ......+.+..+++|+++|.||| +++++.+|.++.. .++..+...+.+.+       +|++
T Consensus        78 ~~~~~~~~~~~~-----~~~~~~~~~~~~~rF~~PV~~GD-tl~~~~~v~~~~~~~~~~~~~~~~~v~~~~~~~~q~G~~  151 (162)
T 2bi0_A           78 TIGLALAQATRL-----LPNLATVLDWESCDHTAPVHEGD-TLYSELHIESAQAHADGGVLGLRSLVYAVSDSASEPDRQ  151 (162)
T ss_dssp             HHHHHHHHHHHH-----STTCCEEEEEEEEEECSCCCTTC-EEEEEEEEEEEEECSSSEEEEEEEEEEECCSSTTSCCEE
T ss_pred             HHHHHHHHHHCC-----CCCHHHHHEECCCEECCCCCCCC-EEEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCE
T ss_conf             999999874234-----34134552012537348867899-999999999832559998799999999757877789986


Q ss_pred             EEEEEEEEEEE
Q ss_conf             99997106998
Q gi|254780460|r  155 IYQANDLRVCL  165 (172)
Q Consensus       155 i~~a~~l~vgl  165 (172)
                      +++++- .+.+
T Consensus       152 V~~~~~-~~~v  161 (162)
T 2bi0_A          152 VLDWRF-SALQ  161 (162)
T ss_dssp             EEEEEE-EEEE
T ss_pred             EEEEEE-EEEE
T ss_conf             999897-7563


No 11 
>>2qwz_A Phenylacetic acid degradation-related protein; YP_613385.1, putative thioesterase, structural genomics, joint center for structural genomics; HET: MSE; 2.15A {Silicibacter SP} (A:)
Probab=98.68  E-value=3.4e-07  Score=62.65  Aligned_cols=133  Identities=7%  Similarity=-0.010  Sum_probs=93.9

Q ss_pred             CCCCCCCCHHHHHHHCCCCCCCCCCCCCC-CCCCEEEE-EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEE
Q ss_conf             88865589889998418835579988899-86412256-89999718441342357887507865530045568995211
Q gi|254780460|r    2 KNRKSSYTYEEILRCGEGEMFGEGNAQLP-KPPMLMFH-RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMP   79 (172)
Q Consensus         2 ~~~~~~f~~~~i~~~~~g~~fg~~~~rLP-~~p~lmiD-rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmP   79 (172)
                      -..+..++.+++.++            +| ++++.+++ ++++++++       .++....+.++      |+.....+.
T Consensus        18 ~~~~~~~~~~~l~~~------------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~------~~n~~g~vh   72 (159)
T 2qwz_A           18 QGXELVFDKDGLSAY------------LEEVFPQIQGEFSIDALAKG-------EITXRLNVQER------HLRPGGTVS   72 (159)
T ss_dssp             SCCCCSSCHHHHHHH------------HHHHCGGGTTTEEEEEECSS-------EEEEEECGGGG------CCCTTCCCC
T ss_pred             HHHHHHCCHHHHHHH------------HHHHCCCCCCCEEEEEEECC-------EEEEEEECCHH------HCCCCCCCC
T ss_conf             655433599999999------------87558201498799999499-------99999997989------939998393


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEEC--CEEEEE
Q ss_conf             275788879988640123346882667630451141023379857999999889630785799999999999--999999
Q gi|254780460|r   80 GCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVN--GKEIYQ  157 (172)
Q Consensus        80 GvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vd--g~~i~~  157 (172)
                      |..+...+-.++++.+...............+++|+++|.+||. ++.+.++.+   .++..++++++++++  |+++++
T Consensus        73 GG~l~~~~d~~~~~~~~~~~~~~~~~~t~~~~i~f~~pv~~gd~-i~~~a~v~~---~g~~~~~~~~~~~~~~~g~~va~  148 (159)
T 2qwz_A           73 GPSXFALADVSVYALVLAHLGREALAVTTNASLDFXRKPESGRD-LLGQARLLK---LGRTLAVGDILLFSEGXEAPVAR  148 (159)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCTTCCCEEEEEEEEECSCCCTTSC-EEEEEEEEE---ECSSEEEEEEEEEETTCSSCSEE
T ss_pred             HHHHHHHHHHCCHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCC-EEEEEEEEE---ECCEEEEEEEEEEECCCCEEEEE
T ss_conf             79988876712466776640478403677634466046556754-799989999---28869999999999999969999


Q ss_pred             EEEEEE
Q ss_conf             971069
Q gi|254780460|r  158 ANDLRV  163 (172)
Q Consensus       158 a~~l~v  163 (172)
                      ++-..+
T Consensus       149 ~~~t~~  154 (159)
T 2qwz_A          149 STXTYS  154 (159)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
T ss_conf             999997


No 12 
>>1q6w_A Monoamine oxidase regulatory protein, putative; structural genomics, nysgxrc T805, hot DOG fold; 2.81A {Archaeoglobus fulgidus dsm 4304} (A:)
Probab=98.63  E-value=3.7e-07  Score=62.44  Aligned_cols=139  Identities=10%  Similarity=0.013  Sum_probs=94.6

Q ss_pred             CC-CCCCEEEEEEEEEECCCCC--CCCE----EEEEEEE---CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCC
Q ss_conf             99-8641225689999718441--3423----5788750---78655300455689952112757888799886401233
Q gi|254780460|r   29 LP-KPPMLMFHRITQISETGGN--YNQG----VVRAEMD---ITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWL   98 (172)
Q Consensus        29 LP-~~p~lmiDrV~~i~~~~g~--~g~G----~i~aek~---i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~   98 (172)
                      +| ++|+++.|....-....+.  ...+    |..+.-|   ++-|++|.+.+..+.|++||.+....+.|+...++...
T Consensus         7 ~~~~~~~~~~d~~vG~~~~~~~~~vt~~~i~~fa~~~gd~~pih~d~~~A~~~g~~~~ia~g~~~~~~~~~~~~~~~~~~   86 (161)
T 1q6w_A            7 IMARNPIYFESIQIGEKIEGLPRTVTETDIWTFAYLTADFFPLHTDVEFAKKTIFGKPIAQGXLVLSIALGXVDQVILSN   86 (161)
T ss_dssp             --CCSBCCGGGCCTTCEEECCCEECCHHHHHHHHHHHTCCCHHHHCHHHHHTSTTSSCBCCHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCEEEECCCCEEEECCEEECHHHHHHHHHHHCCCCCCEECHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHCC
T ss_conf             14799951030064689966697879999999999768997518389898425899942472889999999999886301


Q ss_pred             CC-CCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEE--ECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEEECCC
Q ss_conf             46-8826676304511410233798579999998896--3078579999999999-9999999971069986176
Q gi|254780460|r   99 GE-LGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKI--LRGRVVLGAADGWVKV-NGKEIYQANDLRVCLTIDR  169 (172)
Q Consensus        99 ~~-~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v--~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl~~de  169 (172)
                      .. ...+.+.+..+++|+++|.|||. ++.+.+|..+  .+.+..++.++.++.. ||++|++++. .+.+-+.+
T Consensus        87 ~~~~~~~~~~g~~~~~f~~pv~~GD~-l~~~~~v~~~~~~~~~~~~v~~~~~~~n~~g~~v~~~~~-~~~~~~~~  159 (161)
T 1q6w_A           87 YDVSSVIAFFGIKDVRFLRPVFIGDT-IAASAEVVEKQDFDEKSGVVTYKLEVKNQRGELVLTALY-SALIRKTP  159 (161)
T ss_dssp             SBGGGEEEEEEEEEEEECSCCBTTCE-EEEEEEEEEEEEEETTEEEEEEEEEEECTTSCEEEEEEE-EEEEECCC
T ss_pred             CCCCCEEEEEEEEEEEECCCCCCCCE-EEEEEEEEEEEECCCCCEEEEEEEEEEECCCCEEEEEEE-EEEEECCC
T ss_conf             56777068876657698788899999-999999999998279858999999999699999999799-99997799


No 13 
>>1ixl_A Hypothetical protein PH1136; alpha+beta, hot-DOG-fold, structural genomics, unknown function; 1.94A {Pyrococcus horikoshii} (A:)
Probab=98.46  E-value=4e-06  Score=56.29  Aligned_cols=121  Identities=7%  Similarity=-0.031  Sum_probs=86.9

Q ss_pred             CCCC-CCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf             8998-641225689999718441342357887507865530045568995211275788879988640123346882667
Q gi|254780460|r   28 QLPK-PPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRA  106 (172)
Q Consensus        28 rLP~-~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~  106 (172)
                      .+|+ -|.++.+++++++++.       +....     .+.+..|+...++++|..+.+.+.|++.....     .....
T Consensus         7 ~~~~~~~~~l~~~~~~~~~~~-------~~~~~-----~~~~~~~~~~~g~lhGG~l~~~~d~~~~~~~~-----~~~~~   69 (131)
T 1ixl_A            7 RTHKLTSRILVGKPILIKEGY-------AEVEL-----ETIDEXKVDEKGLVHGGFTFGLADYAAXLAVN-----EPTVV   69 (131)
T ss_dssp             CSCTTCCTTTTCEEEEEETTE-------EEEEE-----ECCGGGBSSTTCBBCHHHHHHHHHHHHHHHHC-----CTTEE
T ss_pred             HHCCCHHHHCCEEEEEEECCE-------EEEEE-----EECHHHCCCCCCCCCHHHHHHHHHHHHHHHCC-----CCEEE
T ss_conf             425101242311999997999-------99999-----98789904999968399999998744455326-----75499


Q ss_pred             EEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEECCCC
Q ss_conf             6304511410233798579999998896307857999999999999999999710699861768
Q gi|254780460|r  107 VSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTIDRG  170 (172)
Q Consensus       107 ~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~de~  170 (172)
                      ....+++|++++.+|+. ++.+.++.+.   ++.....+++++.||+++++++-..+ ...+++
T Consensus        70 t~~~~i~f~~pv~~g~~-l~~~a~v~~~---g~~~~~~~~~i~~~g~lva~a~~~~~-~~~~~~  128 (131)
T 1ixl_A           70 LGKAEVRFTKPVKVGDK-LVAKAKIIED---LGKKKIVEVKVYREEEVVLEGKFYCY-VLEKHV  128 (131)
T ss_dssp             EEEEEEEECSCCBTTCE-EEEEEEEEEE---ETTEEEEEEEEEETTEEEEEEEEEEE-ECSSCT
T ss_pred             EEEEEEEEEEECCCCCE-EEEEEEEEEE---CCCEEEEEEEEEECCEEEEEEEEEEE-EECHHH
T ss_conf             99999999872568988-9999999995---99499999999999999999999999-988304


No 14 
>>3f1t_A Uncharacterized protein Q9I3C8_pseae; PAR319A, NESG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.20A {Pseudomonas aeruginosa} (A:)
Probab=98.34  E-value=1.7e-06  Score=58.60  Aligned_cols=130  Identities=8%  Similarity=-0.042  Sum_probs=89.8

Q ss_pred             CHHHHHHHCCCCCCCCCCCCCC-CCCC--EEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHH
Q ss_conf             9889998418835579988899-8641--225689999718441342357887507865530045568995211275788
Q gi|254780460|r    9 TYEEILRCGEGEMFGEGNAQLP-KPPM--LMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLD   85 (172)
Q Consensus         9 ~~~~i~~~~~g~~fg~~~~rLP-~~p~--lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iE   85 (172)
                      |+||+.+..         .+++ .+||  +|-++|.+++++       +++....++++   +.+|++...+..|+|...
T Consensus         2 t~~~~~~~~---------~~~~~~~p~~~~~g~~i~~~~~~-------~~~~~~~~~~~---~~n~~~~g~v~GG~l~~l   62 (148)
T 3f1t_A            2 SENPLLERA---------RRFLSALRHCQVLGLTVEAADEK-------GLTLRLPYSQA---IIGNPESGVVHGGAITTL   62 (148)
T ss_dssp             --CHHHHHH---------HHHHTTCSHHHHHTCEEEEECSS-------CEEEEECGGGG---BCSCSSSCCBCHHHHHHH
T ss_pred             CCCHHHHHH---------HHHHHCCCHHHHCCCEEEEEECC-------EEEEEEECCHH---HCCCCCCCEECHHHHHHH
T ss_conf             987699999---------99886295888769899999499-------89999992789---938999977717897888


Q ss_pred             HHHHHHHHHCCCCCCCCCEEEEEE-CCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEEC--CEEEEEEEEEE
Q ss_conf             879988640123346882667630-451141023379857999999889630785799999999999--99999997106
Q gi|254780460|r   86 ALWQLTGFFLGWLGELGKGRAVSV-SNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVN--GKEIYQANDLR  162 (172)
Q Consensus        86 a~~Ql~~~~~~~~~~~~~~~~~~~-~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vd--g~~i~~a~~l~  162 (172)
                      +..+++.......+.  ......+ .+++|++++.+|+. ++.+.++.+   .++...+.+++++.|  |+++++++-..
T Consensus        63 ~D~~~~~~~~~~~~~--~~~~~t~~l~i~f~~p~~~g~~-i~~~a~i~~---~~~~~~~~~~~v~~~~~g~~va~~~~t~  136 (148)
T 3f1t_A           63 XDTTCGISTVCVLPD--FEICPTLDLRIDYXHPAEPHKD-VYGFAECYR---VTPNVIFTRGFAYQDDPGQPIAHVVGAF  136 (148)
T ss_dssp             HHHHHHHHGGGTCSS--CCCCCEEEEEEEECSCCCTTSC-EEEEEEEEE---ECSSEEEEEEEEESSCTTSCSEEEEEEE
T ss_pred             HHHHHHHHHHHHCCC--CCEEEEEEEEEEEEECCCCCCE-EEEEEEEEE---ECCCEEEEEEEEEECCCCCEEEEEEEEE
T ss_conf             888878888743578--8447997788999970589975-999999999---4896999999999999994999999999


Q ss_pred             E
Q ss_conf             9
Q gi|254780460|r  163 V  163 (172)
Q Consensus       163 v  163 (172)
                      +
T Consensus       137 ~  137 (148)
T 3f1t_A          137 X  137 (148)
T ss_dssp             E
T ss_pred             E
T ss_conf             9


No 15 
>>3ir3_A HTD2, 3-hydroxyacyl-thioester dehydratase 2; structural genomics, structural genomics consortium, SGC, lyase; 1.99A {Homo sapiens} (A:)
Probab=98.34  E-value=4.2e-06  Score=56.16  Aligned_cols=103  Identities=17%  Similarity=0.088  Sum_probs=76.5

Q ss_pred             EECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCC
Q ss_conf             50786553004556899521127578887998864012334688266763045114102337985799999988963078
Q gi|254780460|r   59 MDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGR  138 (172)
Q Consensus        59 k~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~  138 (172)
                      ..++-|+.|.+.++.++|+.||.+....+.+++.-.+     .......+..+++|+++|.||| +++.+.++.++... 
T Consensus        44 ~pih~D~~~A~~~g~~~~ia~g~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~f~~Pv~~Gd-tl~~~~~v~~~~~~-  116 (148)
T 3ir3_A           44 NPLHLNEDFAKHTKFGNTIVHGVLINGLISALLGTKM-----PGPGCVFLSQEISFPAPLYIGE-VVLASAEVKKLKRF-  116 (148)
T ss_dssp             SCGGGSSCC--------CBCCHHHHHHHHHHHHHHTS-----SCTTCEEEEEEEECCSCCBTTC-EEEEEEEEEEEETT-
T ss_pred             CCCCCCHHHHHHCCCCCEEECCEEEEEEEHHHHCCCC-----CCHHHHHHHHHEEECCCCCCCC-EEEEEEEEEEEECC-
T ss_conf             8330588798145789715025000100012101356-----7315413112006458999998-99999999999579-


Q ss_pred             CEEEEEEEEEEECCEEEEEEEEEEEEEECCC
Q ss_conf             5799999999999999999971069986176
Q gi|254780460|r  139 VVLGAADGWVKVNGKEIYQANDLRVCLTIDR  169 (172)
Q Consensus       139 ~~~~~~~g~~~vdg~~i~~a~~l~vgl~~de  169 (172)
                      ...+..+..+..+|+++++++- .+.+.+.+
T Consensus       117 ~~~~~~~~~~~~~g~~v~~~~~-~~~~~~~~  146 (148)
T 3ir3_A          117 IAIIAVSCSVIESKKTVMEGWV-KVMVPEAS  146 (148)
T ss_dssp             EEEEEEEEEETTTCCEEEEEEE-EEECCCCC
T ss_pred             CCEEEEEEEEEECCEEEEEEEE-EEEECCCC
T ss_conf             8899999999979999999999-99944888


No 16 
>>2f3x_A Transcription factor FAPR; 'HOT-DOG' fold / malonyl-COA complex, gene regulation; HET: MLC; 3.10A {Bacillus subtilis} (A:40-157)
Probab=98.29  E-value=9.3e-05  Score=48.18  Aligned_cols=108  Identities=11%  Similarity=0.067  Sum_probs=79.0

Q ss_pred             EEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEE
Q ss_conf             22568999971844134235788750786553004556899521127578887998864012334688266763045114
Q gi|254780460|r   35 LMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKF  114 (172)
Q Consensus        35 lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkf  114 (172)
                      .|.+++.++++++      +++....+.++++++.     ..++.|.++...+-+++++.+.     .........+++|
T Consensus         3 ~lg~~~~~~~~~~------~~~~~~~~~~~~~~~~-----~g~~hGG~~~~l~d~~~~~~~~-----~~~~~t~~l~~~f   66 (118)
T 2f3x_A            3 EVIGEIIDLELDD------QAISILEIKQEHVFSR-----NQIARGHHLFAQANSLAVAVID-----DELALTASADIRF   66 (118)
T ss_dssp             GSSSEEEEEETTT------EEEEEEECCGGGBCTT-----TCBBCHHHHHHHHHHHHHHTSC-----SSCCEEEEEEEEE
T ss_pred             HHHEEEEEEECCC------EEEEEEECCHHHHCCC-----CCEEEHHHHHHHHHHHHHHHCC-----CCCEEEEEEEEEE
T ss_conf             6311269997894------1799951437883699-----8588888999999999999719-----9848999999899


Q ss_pred             EEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEE--ECCEEEEEEEEEE
Q ss_conf             10233798579999998896307857999999999--9999999997106
Q gi|254780460|r  115 RGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVK--VNGKEIYQANDLR  162 (172)
Q Consensus       115 r~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~--vdg~~i~~a~~l~  162 (172)
                      ++++.|||. +..+.++.+..++   ..+.+++++  .+++++++++-..
T Consensus        67 ~~pv~~Gd~-i~~~a~v~~~g~~---~~~~~~~v~~~~~~~~va~a~~~~  112 (118)
T 2f3x_A           67 TRQVKQGER-VVAKAKVTAVEKE---KGRTVVEVNSYVGEEIVFSGRFDM  112 (118)
T ss_dssp             CSCCBTTCE-EEEEEEEEEEETG---GGEEEEEEEEEETTEEEEEEEEEE
T ss_pred             EECCCCCCE-EEEEEEEEEECCC---EEEEEEEEEEEECCEEEEEEEEEE
T ss_conf             562666747-9999999998792---899999999843999999989999


No 17 
>>2h4u_A Thioesterase superfamily member 2; structural genomics, structural genomics consortium, SGC, hydrolase; 2.20A {Homo sapiens} (A:)
Probab=98.19  E-value=0.00011  Score=47.68  Aligned_cols=118  Identities=15%  Similarity=0.046  Sum_probs=82.0

Q ss_pred             CCC-CCCC---EEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             899-8641---225689999718441342357887507865530045568995211275788879988640123346882
Q gi|254780460|r   28 QLP-KPPM---LMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGK  103 (172)
Q Consensus        28 rLP-~~p~---lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~  103 (172)
                      +++ .+|+   ++-.++++++++       .+.....+.      ..|.....++.|..+.+.+-+++++++. ......
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~v~------~~~~n~~g~vhgG~~~~~~d~~~~~~~~-~~~~~~   84 (145)
T 2h4u_A           19 YFQSMRNFERVLGKITLVSAAPG-------KVICEMKVE------EEHTNAIGTLHGGLTATLVDNISTMALL-CTERGA   84 (145)
T ss_dssp             -----CCGGGGGTTCEEEEEETT-------EEEEEEECC------GGGBCTTSBBCHHHHHHHHHHHHHHHHH-TSSSCC
T ss_pred             HHHHCCCHHHHCCCEEEEEECCC-------EEEEEEECC------HHHCCCCCCEEHHHHHHHHHHHHHHHHH-HHCCCC
T ss_conf             44412566776085699998199-------899999869------9993999969189999988887899998-637886


Q ss_pred             EEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE--CCEEEEEEEEEEE
Q ss_conf             66763045114102337985799999988963078579999999999--9999999971069
Q gi|254780460|r  104 GRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV--NGKEIYQANDLRV  163 (172)
Q Consensus       104 ~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v--dg~~i~~a~~l~v  163 (172)
                      .......+++|++++.+|+. ++.+.++.+   .++..++.+++++.  +|+++++++-..+
T Consensus        85 ~~~t~~~~i~f~~pv~~g~~-v~~~~~v~~---~g~~~~~~~~~v~~~~~g~lva~~~~t~~  142 (145)
T 2h4u_A           85 PGVSVDMNITYMSPAKLGED-IVITAHVLK---QGKTLAFTSVDLTNKATGKLIAQGRHTKH  142 (145)
T ss_dssp             CCEEEEEEEEECSCCBTTCE-EEEEEEEEE---ECSSEEEEEEEEEETTTCCEEEEEEEEEE
T ss_pred             CEEEEEEHHCCCCCCCCCCE-EEEEEEEEE---CCCCEEEEEEEEEECCCCEEEEEEEEEEE
T ss_conf             10222110000257789987-988899999---38989999999999999989999989997


No 18 
>>1iq6_A (R)-hydratase, (R)-specific enoyl-COA hydratase; polyhydroxyalkanoate, aeromonas caviae, the hydratase 2 motif, lyase; 1.50A {Aeromonas punctata} (A:)
Probab=98.15  E-value=1.4e-05  Score=53.01  Aligned_cols=94  Identities=14%  Similarity=0.093  Sum_probs=70.7

Q ss_pred             ECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCC
Q ss_conf             07865530045568995211275788879988640123346882667630451141023379857999999889630785
Q gi|254780460|r   60 DITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRV  139 (172)
Q Consensus        60 ~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~  139 (172)
                      .++-|+.|.+.++.++|++||.+..--+.+++.-.     ........+..+++|+++|.||| +++.+.+++++...+.
T Consensus        35 pih~D~~~a~~~g~~~~i~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~f~~pv~~GD-~i~~~~~v~~~~~~~g  108 (134)
T 1iq6_A           35 PLHLDPAFAATTAFERPIVHGMLLASLFSGLLGQQ-----LPGKGSIYLGQSLSFKLPVFVGD-EVTAEVEVTALREDKP  108 (134)
T ss_dssp             HHHHCHHHHTTSTTCSCBCCHHHHHHHHHHHHHHT-----SSCTTCEEEEEEEEECSCCBTTC-EEEEEEEEEEECSSSS
T ss_pred             CCEECHHHHHHCCCCCCEECCHHHHHHHHHHHHCC-----CCCCEEEEEEEEEEECCCCCCCC-EEEEEEEEEEEECCCC
T ss_conf             53237999965699984650166888986542311-----68850787453208867856899-9999999999995899


Q ss_pred             EEEEEEEEEEE-CCEEEEEEEE
Q ss_conf             79999999999-9999999971
Q gi|254780460|r  140 VLGAADGWVKV-NGKEIYQAND  160 (172)
Q Consensus       140 ~~~~~~g~~~v-dg~~i~~a~~  160 (172)
                       .+.++..+.. +|+++++++-
T Consensus       109 -~v~~~~~~~nq~g~~v~~g~~  129 (134)
T 1iq6_A          109 -IATLTTRIFTQGGALAVTGEA  129 (134)
T ss_dssp             -EEEEEEEEECTTSCEEEEEEE
T ss_pred             -EEEEEEEEEECCCCEEEEEEE
T ss_conf             -999999999899989999999


No 19 
>>2f41_A Transcription factor FAPR; 'HOT-DOG' fold, gene regulation; 2.50A {Bacillus subtilis} (A:)
Probab=98.12  E-value=9e-05  Score=48.26  Aligned_cols=108  Identities=9%  Similarity=0.039  Sum_probs=71.2

Q ss_pred             EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEE
Q ss_conf             25689999718441342357887507865530045568995211275788879988640123346882667630451141
Q gi|254780460|r   36 MFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFR  115 (172)
Q Consensus        36 miDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr  115 (172)
                      +++++.++.++..      .+....+.+++..|     ..++++|.++...+.+.++.++..     ........+++|+
T Consensus         7 l~~~~~~~~~d~~------~i~~~~~~~~~~~~-----~~~i~hGg~~~~~~d~~~~~~~~~-----~~~~~~~~~i~f~   70 (121)
T 2f41_A            7 VIGEIIDLELDDQ------AISILEIKQEHVFS-----RNQIARGHHLFAQANSLAVAVIDD-----ELALTASADIRFT   70 (121)
T ss_dssp             CSSEEEEEETTTE------EEEEEECCGGGBCS-----TTCBBCHHHHHHHHHHHHHHTC--------CCCEEEEEEEEC
T ss_pred             HCCEEEEEECCCC------EEEEEEECCCEECC-----CCCCCCCCHHHHHHHHHHHHHCCC-----CCEEEEEEEEEEE
T ss_conf             3371799948950------89999731200038-----888746243999999999987399-----6236034331757


Q ss_pred             EEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEE
Q ss_conf             0233798579999998896307857999999999999999999710
Q gi|254780460|r  116 GMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDL  161 (172)
Q Consensus       116 ~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l  161 (172)
                      ++|.|||. ++.+.++.+...+.. .+.+......+|+++++++--
T Consensus        71 ~pv~~Gd~-i~~~a~v~~~~~~~~-~~~~~i~~~~~~~~v~~~~~~  114 (121)
T 2f41_A           71 RQVKQGER-VVAKAKVTAVEKEKG-RTVVEVNSYVGEEIVFSGRFD  114 (121)
T ss_dssp             SCCBTTCE-EEEEEEEEEECSSSS-CEEEEEEEEETTEEEEEEEEE
T ss_pred             ECCCCCCE-EEEEEEEEEEECEEE-EEEEEEEEEECCEEEEEEEEE
T ss_conf             52352638-999999999823057-999999997899999999999


No 20 
>>2b3n_A Hypothetical protein AF1124; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.25A {Archaeoglobus fulgidus} (A:)
Probab=98.00  E-value=6.1e-05  Score=49.29  Aligned_cols=90  Identities=10%  Similarity=-0.070  Sum_probs=66.9

Q ss_pred             CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCE
Q ss_conf             78655300455689952112757888799886401233468826676304511410233798579999998896307857
Q gi|254780460|r   61 ITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVV  140 (172)
Q Consensus        61 i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~  140 (172)
                      ++-|+=|.+.+-.++|++||.+..-.+++++.       ........+..+++|+++|.||| +++++.++++.   +..
T Consensus        66 iH~D~~~A~~~g~~~~i~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~rf~~Pv~~Gd-tl~~~~~v~~~---~~~  134 (159)
T 2b3n_A           66 VHFDEDFASKTRFGGRVVHGMLTTSLVSAAVA-------RLPGTVVLLEQSFRYTSPVRIGD-VVRVEGVVSGV---EKN  134 (159)
T ss_dssp             HHHCHHHHHHSTTSSCCCCHHHHHHHHHHHHH-------TSSSCEEEEEEEEEECSCCCTTC-EEEEEEEEEEE---ETT
T ss_pred             CEECHHHHHHCCCCCEEECHHHHHHHHHHHHH-------HCCHHHHHHHHHEEEECCCCCCC-EEEEEEEEEEE---ECC
T ss_conf             51537778546788613014778999999986-------14314534413106643548999-99999999999---799


Q ss_pred             EEEEEEEEEECCEEEEEEEEE
Q ss_conf             999999999999999999710
Q gi|254780460|r  141 LGAADGWVKVNGKEIYQANDL  161 (172)
Q Consensus       141 ~~~~~g~~~vdg~~i~~a~~l  161 (172)
                      ...++..+.++|+++++++-.
T Consensus       135 ~~~~~~~~~~~g~~v~~~~~~  155 (159)
T 2b3n_A          135 RYTIDVKCYTGDKVVAEGVVK  155 (159)
T ss_dssp             EEEEEEEEEETTEEEEEEEEE
T ss_pred             EEEEEEEEEECCEEEEEEEEE
T ss_conf             899999999999999999999


No 21 
>>2cwz_A Thioesterase family protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.85A {Thermus thermophilus HB8} (A:)
Probab=97.63  E-value=0.0018  Score=40.55  Aligned_cols=108  Identities=16%  Similarity=-0.056  Sum_probs=76.0

Q ss_pred             EEEEEEECCCCC-CCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEE
Q ss_conf             578875078655-3004556899521127578887998864012334688266763045114102337985799999988
Q gi|254780460|r   54 VVRAEMDITPNL-WFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFK  132 (172)
Q Consensus        54 ~i~aek~i~~d~-wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik  132 (172)
                      .+..++.|+++. .-|..+.-.+|+.-|-..+-.+-.++++.+...-....+....-.+++|+++|.||+ +++.+.++.
T Consensus         9 ~~~~~~~vt~~~~~~fa~t~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~Pv~~G~-~l~~~~~v~   87 (141)
T 2cwz_A            9 EAVFETVVTPEXTVRFEELGPVHPVYATYWXVKHXELAGRKIILPFLEEGEEGIGSYVEARHLASALPGX-RVRVVARHE   87 (141)
T ss_dssp             EEEEEEECCGGGEEEETTTEEEEEEECHHHHHHHHHHHHHHHHTTTCCTTEEEEEEEEEEEECSCCCTTC-EEEEEEEEE
T ss_pred             EEEEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCC-EEEEEEEEE
T ss_conf             7999999899999998736886731157899999999999998854899983899999999934677998-899999999


Q ss_pred             EEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEE
Q ss_conf             963078579999999999-999999997106998
Q gi|254780460|r  133 KILRGRVVLGAADGWVKV-NGKEIYQANDLRVCL  165 (172)
Q Consensus       133 ~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl  165 (172)
                      ++   ++..+.++++++. +|++|++++--.+-+
T Consensus        88 ~~---~~~~~~~~~~~~n~~g~~v~~g~~~~~~~  118 (141)
T 2cwz_A           88 KT---EGNRVYARVEAYNELGDLIGVGRTEQVIL  118 (141)
T ss_dssp             EE---ETTEEEEEEEEEETTCCEEEEEEEEEEEE
T ss_pred             EE---CCCEEEEEEEEEECCCCEEEEEEEEEEEE
T ss_conf             97---69799999999969999999999999995


No 22 
>>2hbo_A Hypothetical protein (NP_422103.1); structural genomics, PSI- 2, protein structure initiative, joint center for structural genomics, JCSG; HET: MSE PE4; 1.85A {Caulobacter vibrioides} (A:)
Probab=97.48  E-value=0.004  Score=38.48  Aligned_cols=104  Identities=10%  Similarity=-0.047  Sum_probs=72.6

Q ss_pred             EEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEE
Q ss_conf             57887507865530045568995211275788879988640123346882667630451141023379857999999889
Q gi|254780460|r   54 VVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKK  133 (172)
Q Consensus        54 ~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~  133 (172)
                      .++.+..+.+      .|.....++.|..+..-+-++++..+....+  ......--+++|++++.+||. ++.+..+.+
T Consensus        43 ~~~~~~~v~~------~~~~~~G~v~gg~~~~~~d~a~~~~~~~~~~--~~~vt~~~~~~f~~pv~~gd~-l~~~~~v~~  113 (158)
T 2hbo_A           43 QARLAFRVEE------HHTNGLGNCHGGXLXSFADXAWGRIISLQKS--YSWVTVRLXCDFLSGAKLGDW-VEGEGELIS  113 (158)
T ss_dssp             TTCEEEECCG------GGBCSSSBBCHHHHHHHHHHHHHHHHHHHHC--EEEEEEEEEEEECSCCBTTCE-EEEEEEEEE
T ss_pred             EEEEEEEECH------HHCCCCCEECCCHHHHHHHHHHHHHHHCCCC--CCEEEEEEEEEECCCCCCCCE-EEEEEEEEE
T ss_conf             8999999857------8704898677812055677668866340479--841777888898765689999-999999999


Q ss_pred             EECCCCEEEEEEEEEEECCEEEEEEEEEEEEEECCC
Q ss_conf             630785799999999999999999971069986176
Q gi|254780460|r  134 ILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTIDR  169 (172)
Q Consensus       134 v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~de  169 (172)
                      +   ++..++..++++.+|+++++++-..+.+-.+.
T Consensus       114 ~---g~~~~~~~~~~~~~g~~va~a~~~~v~~~~~~  146 (158)
T 2hbo_A          114 E---EDXLFTVRGRIWAGERTLITGTGVFKALSARK  146 (158)
T ss_dssp             E---ETTEEEEEEEEEETTEEEEEEEEEEEEEEECC
T ss_pred             E---CCCEEEEEEEEEECCEEEEEEEEEEEECCCCC
T ss_conf             5---88699999999999999999999999858999


No 23 
>>2pim_A Phenylacetic acid degradation-related protein; YP_298971.1, thioesterase superfamily, structural genomics; 2.20A {Ralstonia eutropha JMP134} (A:)
Probab=97.43  E-value=0.0026  Score=39.60  Aligned_cols=111  Identities=14%  Similarity=0.048  Sum_probs=75.0

Q ss_pred             EEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEE
Q ss_conf             56899997184413423578875078655300455689952112757888799886401233468826676304511410
Q gi|254780460|r   37 FHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRG  116 (172)
Q Consensus        37 iDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~  116 (172)
                      -.++..++.+.     |+++....+++.  +.    -....+-|-.+...+-++++..+...............+++|++
T Consensus        26 ~~~~~~~~~~~-----~~~~~~~~v~~~--~~----n~~g~vhGG~l~~l~D~a~~~~~~~~~~~~~~~~t~~l~i~f~~   94 (141)
T 2pim_A           26 GGVIRAVDLEA-----GSLESDYVATDA--FL----NPVGQVQGGXLGAXLDDVTAXLVTATLEDGASCSTLNLNLSFLR   94 (141)
T ss_dssp             TCEEEEEETTT-----TEEEEEEEECGG--GB----CTTSSBCHHHHHHHHHHHHHHHHHHTCCTTCCCEEEEEEEEECS
T ss_pred             CCEEEEEECCC-----CEEEEEEECCHH--HC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEC
T ss_conf             99559987569-----899999973899--93----98883719999999999999999864676530111217889981


Q ss_pred             EECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEE
Q ss_conf             23379857999999889630785799999999999999999971069
Q gi|254780460|r  117 MVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRV  163 (172)
Q Consensus       117 ~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~v  163 (172)
                      +|.+|+  ++.+.++.   +.++..++.+++++.+|+++++++-..+
T Consensus        95 pv~~g~--v~~~a~v~---~~gr~~~~v~v~i~~~g~lva~~~~t~~  136 (141)
T 2pim_A           95 PAQAGL--LRGRARLE---RRGRNVCNVVGELSQDGKLVATATATCX  136 (141)
T ss_dssp             CCCSEE--EEEEEEEE---EECSSEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             CCCCCE--EEEEEEEE---EECCCEEEEEEEEEECCEEEEEEEEEEE
T ss_conf             377878--99999999---9799899999999999989999999999


No 24 
>>2c2i_A RV0130; hotdog, hydratase, lyase, structural proteomics in europe, spine, structural genomics; 1.8A {Mycobacterium tuberculosis} (A:)
Probab=97.31  E-value=0.0011  Score=41.82  Aligned_cols=130  Identities=12%  Similarity=-0.038  Sum_probs=70.3

Q ss_pred             CC-CCCCEEEEEEEEEECCCCCCCCEEEEEE-EECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf             99-8641225689999718441342357887-507865530045568995211275788879988640123346882667
Q gi|254780460|r   29 LP-KPPMLMFHRITQISETGGNYNQGVVRAE-MDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRA  106 (172)
Q Consensus        29 LP-~~p~lmiDrV~~i~~~~g~~g~G~i~ae-k~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~  106 (172)
                      ++ ..|....+.|++-+-..  +..  +.+. -.++-|+.|.+....+.++.||.+..=.+...+ .-............
T Consensus        14 vG~~~~~~~~~~vt~~~i~~--~a~--~~gd~np~h~d~~~A~~~g~~~~ia~g~~~~~~~~~~~-~~~~~~~~~~~~~~   88 (151)
T 2c2i_A           14 AGEKVGQSDWVTITQEEVNL--FAD--ATGDHQWIHVDPERAAAGPFGTTIAHGFXTLALLPRLQ-HQXYTVKGVKLAIN   88 (151)
T ss_dssp             TTSEEEECCCEECCHHHHHH--HHH--HHSCCCHHHHCHHHHHTSTTSSCBCCHHHHHHTHHHHH-HTTCEESSCSCEEE
T ss_pred             CCCEECCCCCEEECHHHHHH--HHH--HHCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCC-CCEECCCCCCEEEE
T ss_conf             69983489999988999999--999--77899945158467411576861002311221222202-31000255413674


Q ss_pred             EEECCCEEEEEECCCCCEEEEEEEEEEEEC--CCC--EEEEEEEEEEECCEEEEEEEEEEEEE
Q ss_conf             630451141023379857999999889630--785--79999999999999999997106998
Q gi|254780460|r  107 VSVSNIKFRGMVTPDCKLVEYGIDFKKILR--GRV--VLGAADGWVKVNGKEIYQANDLRVCL  165 (172)
Q Consensus       107 ~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~--~~~--~~~~~~g~~~vdg~~i~~a~~l~vgl  165 (172)
                      .+..+++|+++|.||| +++.+.++..+..  .+.  .++.+.+++..+|+++++++- .+.+
T Consensus        89 ~~~~~~~f~~pv~~GD-~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~  149 (151)
T 2c2i_A           89 YGLNKVRFPAPVPVGS-RVRATSSLVGVEDLGNGTVQATVSTTVEVEGSAKPACVAES-IVRY  149 (151)
T ss_dssp             EEEEEEECCSCCBTTC-EEEEEEEEEEEEEEETTEEEEEEEEEEEETTCSSCSEEEEE-EEEE
T ss_pred             ECCEEEEECCCCCCCC-EEEEEEEEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEE-EEEE
T ss_conf             0101659857471153-88999999999993799289999999999799851999987-3400


No 25 
>>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* (G:1283-1670)
Probab=97.31  E-value=0.00083  Score=42.56  Aligned_cols=95  Identities=14%  Similarity=0.115  Sum_probs=66.5

Q ss_pred             ECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCC
Q ss_conf             07865530045568995211275788879988640123346882667630451141023379857999999889630785
Q gi|254780460|r   60 DITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRV  139 (172)
Q Consensus        60 ~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~  139 (172)
                      .|+-|+.|.+.+-...|+++|.+..-.+.+++.-.+..    .........+++|+++|.|||+ ++...+++.... +.
T Consensus       289 piH~d~~~A~~~g~~~~i~~G~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~f~~pv~~gd~-l~~~~~~~~~~~-~~  362 (388)
T 2uva_G          289 PIHVSRVFSSYANLPGTITHGMYTSAAVRSLVETWAAE----NNIGRVRSYHVNMVGMVLPNDA-ITVKLEHVGMIA-GR  362 (388)
T ss_dssp             HHHHCHHHHHHTTCSSSCCCHHHHHHHHHHHHHHHTST----TCTTSCCEEEEEECSCCCTTCE-EEEEEEEEEEET-TE
T ss_pred             HHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC----CCCCCEEEEEEEEEEEECCCCE-EEEEEEEEEEEC-CC
T ss_conf             21158889986599987125104999999999997503----8875237899887885348998-899999998856-88


Q ss_pred             EEEEEEEEEEECCEEEEEEEE
Q ss_conf             799999999999999999971
Q gi|254780460|r  140 VLGAADGWVKVNGKEIYQAND  160 (172)
Q Consensus       140 ~~~~~~g~~~vdg~~i~~a~~  160 (172)
                      ..+.++..+.++|+++++++-
T Consensus       363 ~~~~~~~~~~~~~~~v~~g~~  383 (388)
T 2uva_G          363 KIIKVDARNKDTDESVLQGEA  383 (388)
T ss_dssp             EEEEEEEEETTTCCEEEEEEE
T ss_pred             CEEEEEEEECCCCCEEEEEEE
T ss_conf             589999998579968999899


No 26 
>>1yoc_A Hypothetical protein PA1835; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa PAO1} (A:)
Probab=97.23  E-value=0.014  Score=35.22  Aligned_cols=116  Identities=10%  Similarity=-0.001  Sum_probs=72.2

Q ss_pred             CCCCE--EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
Q ss_conf             86412--2568999971844134235788750786553004556899521127578887998864012334688266763
Q gi|254780460|r   31 KPPML--MFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVS  108 (172)
Q Consensus        31 ~~p~l--miDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~  108 (172)
                      ..||.  +=-+++++++       |+++.+..++++  ..    -...++-|-.+.-.+--+++..+ ............
T Consensus        25 ~~p~~~~~g~~~~~~~~-------~~~~~~~~~~~~--~~----n~~g~vhGG~~~~l~D~~~g~~~-~~~~~~~~~~~t   90 (147)
T 1yoc_A           25 FAPYFASIAPQFVELRP-------GYAEVTFPKRRE--VL----NHIGTVHAIALCNAAELAAGTMT-DASIPAGHRWIP   90 (147)
T ss_dssp             HSGGGGGGCCEEEEEET-------TEEEEEECCCGG--GB----CTTSSBCHHHHHHHHHHHHHHHH-HHHSCTTEEEEE
T ss_pred             HCCHHHCCCCEEEEEEC-------CEEEEEEEECHH--HH----CCHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCEEEE
T ss_conf             18912213749999939-------999999995579--93----85124338898999999999999-975898760688


Q ss_pred             E-CCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEE
Q ss_conf             0-451141023379857999999889630785799999999999999999971069
Q gi|254780460|r  109 V-SNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRV  163 (172)
Q Consensus       109 ~-~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~v  163 (172)
                      + -+++|++++..|+.   .++++.++.++++..++.+++++.+|+++++++...+
T Consensus        91 ~~l~i~f~~p~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~va~~~~t~~  143 (147)
T 1yoc_A           91 RGMTVEYLAKATGDVR---AVADGSQIDWQATGNLVVPVVAYVDDKPVFRAEITMY  143 (147)
T ss_dssp             EEEEEEECSCCCSCEE---EEEECTTSCTTCCEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             EEEEEEEEEECCCCEE---EEEEEEEHHCCCCCEEEEEEEEECCCCEEEEEEEEEE
T ss_conf             8888998740469779---9999974006564059999999849958999999999


No 27 
>>1o0i_A Hypothetical protein HI1161; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.70A {Haemophilus influenzae} (A:)
Probab=96.99  E-value=0.026  Score=33.68  Aligned_cols=128  Identities=11%  Similarity=-0.044  Sum_probs=82.4

Q ss_pred             CCCCHHHHHHHCCCCCCCCCCCCCCCCC--CEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHH
Q ss_conf             5589889998418835579988899864--12256899997184413423578875078655300455689952112757
Q gi|254780460|r    6 SSYTYEEILRCGEGEMFGEGNAQLPKPP--MLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLG   83 (172)
Q Consensus         6 ~~f~~~~i~~~~~g~~fg~~~~rLP~~p--~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~   83 (172)
                      ..++.+++..+             +.+|  -.+=-++++++++       +++.+..++++      |.-....+-|..+
T Consensus         5 ~~~~~~~~~~~-------------~~~p~~~~lg~~i~~~~~g-------~~~~~~~~~~~------~~n~~g~~hGG~~   58 (138)
T 1o0i_A            5 KTFTLENLNQL-------------CSNSAVSHLGIEISAFGED-------WIEATXPVDHR------TXQPFGVLHGGVS   58 (138)
T ss_dssp             SCCCHHHHHHH-------------TSSSHHHHTTCEEEEECSS-------CEEEEEECSTT------TBCTTSSBCHHHH
T ss_pred             CCCCHHHHHHH-------------CCCHHHHHCCCEEEEEECC-------EEEEEEECCHH------HCCCCCEECHHHH
T ss_conf             75899999765-------------6320888559899999699-------89999997989------9599980838999


Q ss_pred             HHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEE
Q ss_conf             8887998864012334688266763045114102337985799999988963078579999999999-999999997106
Q gi|254780460|r   84 LDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLR  162 (172)
Q Consensus        84 iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~  162 (172)
                      ...+-.++++.+...-...........+++|.+++.+|+  ++.+.++   .+.++..++.+++++. ||+++++++...
T Consensus        59 ~~l~D~a~~~~~~~~~~~~~~~~t~~~~i~f~~p~~~g~--i~~~a~v---~~~g~~~~~~~~~i~~~~g~lva~~~~~~  133 (138)
T 1o0i_A           59 VALAETIGSLAGSLCLEEGKTVVGLDINANHLRPVRSGK--VTARATP---INLGRNIQVWQIDIRTEENKLCCVSRLTL  133 (138)
T ss_dssp             HHHHHHHHHHHHHHTSCTTEEEEEEEEEEEECSCCCSSE--EEEEEEE---EEECSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCE--EEEEEEE---EECCCCEEEEEEEEECCCCCEEEEEEEEE
T ss_conf             999999999999984688842688778899975688977--9999999---97488799999999918998999999999


Q ss_pred             EE
Q ss_conf             99
Q gi|254780460|r  163 VC  164 (172)
Q Consensus       163 vg  164 (172)
                      +.
T Consensus       134 ~~  135 (138)
T 1o0i_A          134 SV  135 (138)
T ss_dssp             EE
T ss_pred             EE
T ss_conf             99


No 28 
>>2fs2_A Phenylacetic acid degradation protein PAAI; operon, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} (A:)
Probab=96.91  E-value=0.03  Score=33.26  Aligned_cols=117  Identities=9%  Similarity=-0.068  Sum_probs=78.1

Q ss_pred             CCCCCC-EEEE-EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf             998641-2256-89999718441342357887507865530045568995211275788879988640123346882667
Q gi|254780460|r   29 LPKPPM-LMFH-RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRA  106 (172)
Q Consensus        29 LP~~p~-lmiD-rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~  106 (172)
                      ++.+|| ..++ ++.+++++       .++....+.++....      ...+.|..+.+.+-.+++++....   +....
T Consensus        14 ~~~~p~~~~l~~~~~~~~~~-------~~~~~~~v~~~~~n~------~G~v~gG~~~~l~d~~~~~~~~~~---~~~~~   77 (151)
T 2fs2_A           14 YENDACAKALGIDIISXDEG-------FAVVTXTVTAQXLNG------HQSCHGGQLFSLADTAFAYACNSQ---GLAAV   77 (151)
T ss_dssp             HHHHHHHHHHTCEEEEEETT-------EEEEEEECCGGGBCT------TSBBCHHHHHHHHHHHHHHHHHTT---TCCCE
T ss_pred             HHCCHHHHHCCCEEEEEECC-------EEEEEEEECHHHCCC------CCCCCCCHHEEHHHHHHHHHHHHC---CCCEE
T ss_conf             84589888639999999599-------999999907999899------993976503006889999999746---98706


Q ss_pred             EEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEE
Q ss_conf             63045114102337985799999988963078579999999999-999999997106998
Q gi|254780460|r  107 VSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCL  165 (172)
Q Consensus       107 ~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl  165 (172)
                      ....+++|.+++.+|+. ++.+.++   .+.++..++.+++++. ||+++++++-..+.+
T Consensus        78 t~~~~i~f~~pv~~g~~-v~~~a~v---~~~g~~~~~~~~~v~~~~g~lva~~~~~~~~~  133 (151)
T 2fs2_A           78 ASACTIDFLRPGFAGDT-LTATAQV---RHQGKQTGVYDIEIVNQQQKTVALFRGKSHRI  133 (151)
T ss_dssp             EEEEEEEECSCCBTTCE-EEEEEEE---EEECSSEEEEEEEEECTTSCEEEEEEEEEEC-
T ss_pred             EEEEEEEEEECCCCCCE-EEEEEEE---EEECCEEEEEEEEEECCCCCEEEEEEEEEEEE
T ss_conf             78767789852689989-9999999---99331289999999978994999999999997


No 29 
>>3exz_A MAOC-like dehydratase; Q2RSA1_rhort, NESG, RRR103A, structural genomics, PSI-2, protein structure initiative; 2.30A {Rhodospirillum rubrum atcc 11170} (A:)
Probab=96.74  E-value=0.03  Score=33.28  Aligned_cols=96  Identities=8%  Similarity=-0.044  Sum_probs=60.7

Q ss_pred             CCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECC----CCEEE
Q ss_conf             00455689952112757888799886401233468826676304511410233798579999998896307----85799
Q gi|254780460|r   67 FFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRG----RVVLG  142 (172)
Q Consensus        67 ff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~----~~~~~  142 (172)
                      |.+..=.+++++||.+..--+..++.   .+.............+++|+++|.||| +++.+.+|..+...    +..++
T Consensus        44 ~A~~~g~~~~ia~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~f~~pv~~Gd-tl~~~~~v~~~~~~~~~~~~~~v  119 (154)
T 3exz_A           44 AARHSLFGGLAASGWHTAAITXRLLV---TSGLPLAQGIIGAGTELSWPNPTRPGD-ELHVETTVLAITPSKSRPDRAIV  119 (154)
T ss_dssp             HHHTSTTCSCCCCHHHHHHHHHHHHH---HTTSCBTTCCCEEEEEEECSSCCCTTC-EEEEEEEEEEEEECSSCTTEEEE
T ss_pred             HHHHCCCCCCCHHHHHHHHHHHHHHH---HCCCCCCCCEEEECCEEEECCCCCCCC-EEEEEEEEEEEEECCCCCCCEEE
T ss_conf             75234567632167889999998876---314566410464020128888889998-56899999888733656983499


Q ss_pred             EEEEEEEE-CCEEEEEEEEEEEEEEC
Q ss_conf             99999999-99999999710699861
Q gi|254780460|r  143 AADGWVKV-NGKEIYQANDLRVCLTI  167 (172)
Q Consensus       143 ~~~g~~~v-dg~~i~~a~~l~vgl~~  167 (172)
                      ..+.++.. +|++|++.+.. +.+.+
T Consensus       120 ~~~~~~~nq~g~~V~~~~~~-~~~~~  144 (154)
T 3exz_A          120 TCQSDTLNQRGEVVQRSTAK-VVVFR  144 (154)
T ss_dssp             EEEEEEECTTSCEEEEEEEE-EEEEC
T ss_pred             EEEEEEEECCCCEEEEEEEE-EEEEC
T ss_conf             99999997999899998999-99988


No 30 
>>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* (G:1261-1643)
Probab=96.72  E-value=6.6e-05  Score=49.07  Aligned_cols=117  Identities=12%  Similarity=0.062  Sum_probs=75.6

Q ss_pred             CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCC--CCCEEEEE
Q ss_conf             8641225689999718441342357887507865530045568995211275788879988640123346--88266763
Q gi|254780460|r   31 KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGE--LGKGRAVS  108 (172)
Q Consensus        31 ~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~--~~~~~~~~  108 (172)
                      +.|++..++|++-+..        ..+...-+.|..++..||...+.+||.+ +.+|++++.........  ........
T Consensus       259 ~~~~~~~~~v~~~~~~--------~~a~~sgd~npiH~d~~~A~~~g~~~~i-~hG~~~~~~~~~~~~~~~~~~~~~~~~  329 (383)
T 2uv8_G          259 PIPIAVLDSYTPSTNE--------PYARVSGDLNPIHVSRHFASYANLPGTI-THGMFSSASVRALIENWAADSVSSRVR  329 (383)
T ss_dssp             HHHHTSEEECSEEEEE--------EEEEEEEEEEECCSCSHHHHHHHTCCCG-GGTCHHHHHHTTCSSSCCCHHHHHHHH
T ss_pred             HHHHCCCCCCCCCCCC--------CCCCCCCEEEECCCCCCCCHHHCCCCCH-HHCCHHHHHHCCCCCCEECCCHHHHHH
T ss_conf             8875698644554467--------8876662257678888730233278772-115888898659998713501288999


Q ss_pred             ECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEE
Q ss_conf             045114102337985799999988963078579999999999-9999999971
Q gi|254780460|r  109 VSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQAND  160 (172)
Q Consensus       109 ~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~  160 (172)
                      ..+++|+++|.|||+ ++.+.++.+.   +...+.++.++.+ +|+++++++-
T Consensus       330 ~~~~~f~~pv~~gd~-l~~~~~~~~~---~~~~~~~~~~~~~~~g~~v~~~~~  378 (383)
T 2uv8_G          330 GYTCQFVDMVLPNTA-LKTSIQHVGM---INGRKLIKFETRNEDDVVVLTGEA  378 (383)
T ss_dssp             HHHHHHHHSTTCGGG-EEEEEEEECS---CCCSSCEEEEEEEEEEEETTEEEE
T ss_pred             HHHHHHHHCCCCCCC-EEEEEEEEEE---EECCCCEEEEEEEEEEEECCCEEE
T ss_conf             999999850598750-6889999788---534899899999999894688079


No 31 
>>3gek_A Putative thioesterase YHDA; X-RAY, structure genomics, NESG, KR113, Q9CHK5_lacla, structural genomics, PSI-2; 2.24A {Lactococcus lactis subsp} (A:)
Probab=96.64  E-value=0.049  Score=32.01  Aligned_cols=108  Identities=10%  Similarity=-0.139  Sum_probs=70.8

Q ss_pred             CCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEE
Q ss_conf             13423578875078655300455689952112757888799886401233468826676304511410233798579999
Q gi|254780460|r   49 NYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYG  128 (172)
Q Consensus        49 ~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~  128 (172)
                      .+..|+++.+..+.++      |.....++-|......+-.+++..+.............-.++.|++++.+|+. ++.+
T Consensus        24 ~~~~~~~~~~~~v~~~------~~n~~G~v~gg~~~~l~d~~~g~~~~~~~~~~~~~v~~~~~i~f~~p~~~g~~-i~i~   96 (146)
T 3gek_A           24 VSKIYKFSSKXILSDF------HAQPQGFLNGGASLALAEITAGXASNAIGSGQYFAFGQSINANHLNPKKCEGF-VNAR   96 (146)
T ss_dssp             SSCCEEEEEEEECCGG------GBCTTSBBCHHHHHHHHHHHHHHHHHHHHTTSCEEEEEEEEEEECSCCBSSSE-EEEE
T ss_pred             EEEEEEEEEEEECCHH------HCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCC-EEEE
T ss_conf             2333689999874654------16999888499799999999876631417754532304211054025556771-7999


Q ss_pred             EEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEEE
Q ss_conf             9988963078579999999999-9999999971069986
Q gi|254780460|r  129 IDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCLT  166 (172)
Q Consensus       129 i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl~  166 (172)
                      .++.+   .++.....++.++. ||+++++++-..+.+-
T Consensus        97 ~~v~~---~gr~~~~~~~~~~~~dg~lva~~~~~~v~~~  132 (146)
T 3gek_A           97 GLLLK---NGKRNHVWEIKITDENETLISQITVVNALVP  132 (146)
T ss_dssp             EEEEE---ECSSEEEEEEEEEETTCCEEEEEEEEEEEEC
T ss_pred             EEEEE---CCCEEEEEEEEEECCCCCEEEEEEEEEEEEC
T ss_conf             99995---4741899999999399989999999999968


No 32 
>>1zki_A Hypothetical protein PA5202; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa PAO1} (A:)
Probab=96.54  E-value=0.057  Score=31.62  Aligned_cols=117  Identities=9%  Similarity=0.010  Sum_probs=66.5

Q ss_pred             CCCCCCE-EEE-EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf             9986412-256-89999718441342357887507865530045568995211275788879988640123346882667
Q gi|254780460|r   29 LPKPPML-MFH-RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRA  106 (172)
Q Consensus        29 LP~~p~l-miD-rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~  106 (172)
                      ...+||. .+. +|.+++++       +++.+..+.++  +.. |   ...+=|-.+.=.+-.++++.............
T Consensus        11 ~~~~p~~~~~g~~i~~~~~~-------~~~~~~~~~~~--~~n-~---~g~~hGG~~~tl~D~~~g~~~~~~~~~~~~~~   77 (133)
T 1zki_A           11 QXISAYSELVGLDPVSLGDG-------VAEVRLPXAAH--LRN-R---GGVXHGGALFSLXDVTXGLACSSSHGFDRQSV   77 (133)
T ss_dssp             GSCCHHHHHHTCEEEEECSS-------EEEEEEECCGG--GBC-T---TSSBCHHHHHHHHHHHHHHHHHHHHCTTSCEE
T ss_pred             HHHHHHHHHHCCEEEEEECC-------EEEEEEECCHH--HCC-C---CCCEECEEEEEECCCCCCCCEEHHCCCCCCCE
T ss_conf             14549999749999999599-------99999997989--949-9---99491452385311144100000113344211


Q ss_pred             EEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEE
Q ss_conf             630451141023379857999999889630785799999999999999999971069
Q gi|254780460|r  107 VSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRV  163 (172)
Q Consensus       107 ~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~v  163 (172)
                      ..-.+++|.+++..|+  ++.+.++   .+.++..++.+++++.+|+++++++-..+
T Consensus        78 t~~l~i~fl~p~~~g~--l~~~a~~---~~~g~~~~~~~~~i~~~g~~va~a~~t~~  129 (133)
T 1zki_A           78 TLECKINYIRAVADGE--VRCVARV---LHAGRRSLVVEAEVRQGDKLVAKGQGTFA  129 (133)
T ss_dssp             EEEEEEEECSCCCSSE--EEEEEEE---EEECSSEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             EEEEEEEEECCCCCCE--EEEEEEE---EEECCCEEEEEEEEEECCEEEEEEEEEEE
T ss_conf             1015889964899988--9999999---99089899999999999999999999999


No 33 
>>3f5o_A Thioesterase superfamily member 2; hotdog fold, hydrolase; HET: UOC COA P6G; 1.70A {Homo sapiens} PDB: 2f0x_A* 2cy9_A (A:)
Probab=96.46  E-value=0.065  Score=31.31  Aligned_cols=119  Identities=15%  Similarity=0.018  Sum_probs=79.5

Q ss_pred             CCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
Q ss_conf             99864122568999971844134235788750786553004556899521127578887998864012334688266763
Q gi|254780460|r   29 LPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVS  108 (172)
Q Consensus        29 LP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~  108 (172)
                      .|--+.++-.++.+++++       +++....+.++      |.....++-|..+...+-++.+..+. ...........
T Consensus        19 ~~~~~~~~~~~~~~~~~~-------~~~~~~~v~~~------~~n~~G~v~gG~~~~~~d~~~~~~~~-~~~~~~~~~~~   84 (148)
T 3f5o_A           19 RNFERVLGKITLVSAAPG-------KVICEMKVEEE------HTNAIGTLHGGLTATLVDNISTMALL-CTERGAPGVSV   84 (148)
T ss_dssp             SSGGGGGTTCEEEEEETT-------EEEEEEECCGG------GBCTTSBBCHHHHHHHHHHHHHHHHH-TSSSCCCCEEE
T ss_pred             CCHHHHHCCEEEEEECCC-------EEEEEEECCHH------HCCCCCCCCHHHHHHHHHHHHHHHHH-HCCCCCCCEEE
T ss_conf             887898598699998199-------99999996999------96988957163689999888888998-60789721224


Q ss_pred             ECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE--CCEEEEEEEEEEEEE
Q ss_conf             045114102337985799999988963078579999999999--999999997106998
Q gi|254780460|r  109 VSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV--NGKEIYQANDLRVCL  165 (172)
Q Consensus       109 ~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v--dg~~i~~a~~l~vgl  165 (172)
                      ..+++|+++|..|+. +..+.++.+   .++...+.+++++.  +|+++++++...+.+
T Consensus        85 ~~~i~f~~pv~~g~~-l~~~~~v~~---~g~~~~~~~~~i~~~~~~~~~a~a~~~~v~~  139 (148)
T 3f5o_A           85 DMNITYMSPAKLGED-IVITAHVLK---QGKTLAFTSVDLTNKATGKLIAQGRHTKHLG  139 (148)
T ss_dssp             EEEEEECSCCBTTCE-EEEEEEEEE---ECSSEEEEEEEEEETTTCCEEEEEEEEEECC
T ss_pred             EEEEEEECCCCCCCE-EEEEEEEEE---ECCCEEEEEEEEEECCCCEEEEEEEEEEEEE
T ss_conf             688899605799998-999999999---4887999999999999998999999999984


No 34 
>>2bi0_A Hypothetical protein RV0216; conserved hypothetical, hotdog-fold, structural proteomics in europe, spine, structural genomics; 1.9A {Mycobacterium tuberculosis} (A:1-175)
Probab=96.45  E-value=0.066  Score=31.27  Aligned_cols=98  Identities=6%  Similarity=-0.054  Sum_probs=60.7

Q ss_pred             CCCCCCCC-CCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCC----
Q ss_conf             55300455-6899521127578887998864012334688266763045114102337985799999988963078----
Q gi|254780460|r   64 NLWFFDCH-FKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGR----  138 (172)
Q Consensus        64 d~wff~gH-Fp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~----  138 (172)
                      |+.|.+.. |.+.++.||.+..-.+.+++.-     .........+..+++|+++|.|||+ ++.+.++..+...+    
T Consensus        53 D~~~A~~~g~~g~~i~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~f~~Pv~~GDt-l~~~~~v~~~~~~~~~~~  126 (175)
T 2bi0_A           53 DSDLCAAVTGXPGPLAHPGLVCDVAIGQSTL-----ATQRVKANLFYRGLRFHRFPAVGDT-LYTRTEVVGLRANSPKPG  126 (175)
T ss_dssp             CHHHHHHHHCCSSCBCCHHHHHHHHHHHHTT-----TTTTCSEEEEEECEEBSSCCBTTCE-EEEEEEEEEEEECCCCTT
T ss_pred             CHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC-----CCCCCCEEEEEEEEEEECCCCCCCE-EEEEEEEEEEEECCCCCC
T ss_conf             9999985078887542528899998763003-----4676104434315578135689999-999999999860577888


Q ss_pred             ---CEEEEEEEEEEE-CCEEEEEEEEEEEEEECC
Q ss_conf             ---579999999999-999999997106998617
Q gi|254780460|r  139 ---VVLGAADGWVKV-NGKEIYQANDLRVCLTID  168 (172)
Q Consensus       139 ---~~~~~~~g~~~v-dg~~i~~a~~l~vgl~~d  168 (172)
                         ..++..+.++.. +|++|++++.. +.+-+.
T Consensus       127 ~~~~~~v~~~~~~~nq~g~~V~~~~~~-~~~~~~  159 (175)
T 2bi0_A          127 RAPTGLAGLRXTTIDRTDRLVLDFYRC-AXLPAS  159 (175)
T ss_dssp             SCCEEEEEEEEEEECTTCCEEEEEEEE-EEEECC
T ss_pred             CCCCEEEEEEEEEECCCCCEEEEEEEE-EEEECC
T ss_conf             886379999999998999778999998-899826


No 35 
>>1wlu_A PAAI protein, phenylacetic acid degradation protein PAAI; thioesterase, hot DOG fold, structural genomics; 1.45A {Thermus thermophilus HB8} (A:)
Probab=95.76  E-value=0.14  Score=29.26  Aligned_cols=99  Identities=8%  Similarity=-0.100  Sum_probs=64.0

Q ss_pred             EEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEE
Q ss_conf             35788750786553004556899521127578887998864012334688266763045114102337985799999988
Q gi|254780460|r   53 GVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFK  132 (172)
Q Consensus        53 G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik  132 (172)
                      ++++.+..|.+++==      ...++-|......+-.+++.++..    .......-.+++|++++.+|+. ++.+.++.
T Consensus        19 ~~~~~~~~v~~~~~d------~~G~v~gg~~~~~~d~a~~~~~~~----~~~~v~~~~~i~f~~p~~~g~~-i~i~a~v~   87 (136)
T 1wlu_A           19 GEAVVAGEVRADHLN------LHGTAHGGFLYALADSAFALASNT----RGPAVALSCRMDYFRPLGAGAR-VEARAVEV   87 (136)
T ss_dssp             TEEEEEEECCGGGBC------TTSSBCHHHHHHHHHHHHHHHHHT----TSCEEEEEEEEEECSCCCTTCE-EEEEEEEE
T ss_pred             CEEEEEEEECHHHCC------CCCEECCCHHHHHHHHHHHHHHHC----CCCCCEEEEEEEEEECCCCCCE-EEEEEEEE
T ss_conf             999999996999989------998191532233225667766642----4553258889999625579988-99999999


Q ss_pred             EEECCCCEEEEEEEEEEECCEEEEEEEEEEEEE
Q ss_conf             963078579999999999999999997106998
Q gi|254780460|r  133 KILRGRVVLGAADGWVKVNGKEIYQANDLRVCL  165 (172)
Q Consensus       133 ~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl  165 (172)
                      ++   ++..+..+++++.+|+++++++-..+.+
T Consensus        88 ~~---g~~~~~~~~~i~~~~~~~a~~~~~~~~~  117 (136)
T 1wlu_A           88 NL---SRRTATYRVEVVSEGKLVALFTGTVFRL  117 (136)
T ss_dssp             EE---CSSEEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred             EC---CCCEEEEEEEEEECCEEEEEEEEEEEEE
T ss_conf             86---8849999999999999999999999999


No 36 
>>1s9c_A Peroxisomal multifunctional enzyme type 2; hot-DOG fold, hydratase 2 motif, lyase; 3.00A {Homo sapiens} (A:)
Probab=95.54  E-value=0.046  Score=32.16  Aligned_cols=89  Identities=10%  Similarity=-0.039  Sum_probs=50.8

Q ss_pred             CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCE
Q ss_conf             78655300455689952112757888799886401233468826676304511410233798579999998896307857
Q gi|254780460|r   61 ITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVV  140 (172)
Q Consensus        61 i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~  140 (172)
                      |+-|.-|.+..=.+.++++|.+..-.+..++.-    ......+...+..+++|+++|.|||+ ++...++.    .+  
T Consensus       197 iH~d~~~a~~~g~~~~i~~G~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~f~~pv~~gd~-l~~~~~~~----~~--  265 (298)
T 1s9c_A          197 LHIDPNFASLAGFDKPILHGLCTFGFSARRVLQ----QFADNDVSRFKAVKARFAKPVYPGQT-LQTEMWKE----GN--  265 (298)
T ss_dssp             GGTCHHHHHTTTCSSCCCCHHHHHHHHHHHHHH----HHSTTCGGGEEEEEEEECSCCCTTCE-EEEEEEEE----TT--
T ss_pred             EECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHH----HHCCCCHHHEEEEEEEECCCCCCCCE-EEEEEEEE----CC--
T ss_conf             776999995568887101556788998753333----31355700078899998468799999-99999997----99--


Q ss_pred             EEEEEEEEEECCEEEEEEEE
Q ss_conf             99999999999999999971
Q gi|254780460|r  141 LGAADGWVKVNGKEIYQAND  160 (172)
Q Consensus       141 ~~~~~g~~~vdg~~i~~a~~  160 (172)
                      .+.++.....+|+++++++-
T Consensus       266 ~~~~~~~~~~~g~~v~~~~~  285 (298)
T 1s9c_A          266 RIHFQTKVQETGDIVISNAY  285 (298)
T ss_dssp             EEEEEEEETTTTEEEEEEEE
T ss_pred             EEEEEEEECCCCEEEEECCE
T ss_conf             99999999239949995948


No 37 
>>3khp_A MAOC family protein; ssgcid, NIH, niaid, decode, university of washington, emerald biostructures, SBRI, dehydrogenase; HET: TLA; 2.30A {Mycobacterium tuberculosis H37RV} (A:)
Probab=95.36  E-value=0.066  Score=31.25  Aligned_cols=92  Identities=11%  Similarity=0.013  Sum_probs=50.3

Q ss_pred             CCCCCCCC-CCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCC
Q ss_conf             78655300-45568995211275788879988640123346882667630451141023379857999999889630785
Q gi|254780460|r   61 ITPNLWFF-DCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRV  139 (172)
Q Consensus        61 i~~d~wff-~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~  139 (172)
                      |+-|..|- +..-..+++++|.+..=.+..+..-..    ...........+++|+++|.|||+ ++.+.+++   ..+.
T Consensus       211 iH~d~~~~a~~~G~~~~ivhG~~~~~~~~~~~~~~~----~~~~~~~~~~~~~rf~~Pv~~gd~-l~~~~~~~---~~~~  282 (311)
T 3khp_A          211 LHSDPWFATQLAGFPKPILHGLCTYGVAGRALVAEL----GGGVAANITSIAARFTKPVFPGET-LSTVIWRT---EPGR  282 (311)
T ss_dssp             GGTCHHHHHHTTCCSSCCCCHHHHHHHHHHHHHHHT----TTTCGGGEEEEEEEECSCCCTTCC-EEEEEEEE---ETTE
T ss_pred             CCCCHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHH----CCCCCEEEEEEEEEEECCCCCCCE-EEEEEEEE---CCCE
T ss_conf             588888998635899725027788888865456753----688762699999993036799999-99999996---6986


Q ss_pred             EEEEEEEEEEE-CCEEEEEEEE
Q ss_conf             79999999999-9999999971
Q gi|254780460|r  140 VLGAADGWVKV-NGKEIYQAND  160 (172)
Q Consensus       140 ~~~~~~g~~~v-dg~~i~~a~~  160 (172)
                      ..+..+..+.+ +|+++++.+-
T Consensus       283 ~~~~~~~~~~n~~g~~v~~~~~  304 (311)
T 3khp_A          283 AVFRTEVAGSDGAEARVVLDDG  304 (311)
T ss_dssp             EEEEEEECC----CCEEEEEEE
T ss_pred             EEEEEEEEEEECCCCCEEEECE
T ss_conf             9999999998388883999077


No 38 
>>1pn2_A Peroxisomal hydratase-dehydrogenase-epimerase; hot-DOG fold, hydratase 2 motif, lyase; 1.95A {Candida tropicalis} (A:)
Probab=95.32  E-value=0.067  Score=31.22  Aligned_cols=47  Identities=13%  Similarity=-0.020  Sum_probs=32.4

Q ss_pred             EECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEE
Q ss_conf             30451141023379857999999889630785799999999999999999971
Q gi|254780460|r  108 SVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQAND  160 (172)
Q Consensus       108 ~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~  160 (172)
                      ...+++|+++|.|||+ +++.+++.     ....+.++..+..+|+++++++-
T Consensus       224 ~~~~~rf~~pv~~gd~-l~~~~~~~-----~~~~~~~~~~~~~~~~~v~~g~~  270 (280)
T 1pn2_A          224 NEIKARFTGIVFPGET-LRVLAWKE-----SDDTIVFQTHVVDRGTIAINNAA  270 (280)
T ss_dssp             EEEEEEECSCCCTTCE-EEEEEEEC-----SSSEEEEEEEETTTTEEEEEEEE
T ss_pred             EEEEEEECCCCCCCCE-EEEEEEEE-----CCCEEEEEEEECCCCEEEEECCE
T ss_conf             6899997268578999-99999994-----79889999999339989995978


No 39 
>>3kg8_A CURJ; polyketide synthase, double hotdog fold, dehydratase; 2.45A {Lyngbya majuscula} (A:)
Probab=95.26  E-value=0.22  Score=28.20  Aligned_cols=124  Identities=11%  Similarity=-0.052  Sum_probs=77.2

Q ss_pred             CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCC--EEEEE
Q ss_conf             8641225689999718441342357887507865530045568995211275788879988640123346882--66763
Q gi|254780460|r   31 KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGK--GRAVS  108 (172)
Q Consensus        31 ~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~--~~~~~  108 (172)
                      ++.|.-|.+|.. ..       +...++-.++.+....    .+..+-|  .+++++.|++.+++........  ..-.+
T Consensus       179 g~~f~~i~~i~~-~~-------~~~~a~~~~~~~~~~~----~~~~~hP--~llD~~~q~~~~~~~~~~~~~~~~~vP~~  244 (308)
T 3kg8_A          179 GQSFRWIEQVWL-GE-------GEVLCQMKVPKTILNT----TKYQLHP--TLVDSCFQSIIALVLDQSGNKNETFVPFS  244 (308)
T ss_dssp             CGGGCCEEEEEE-CS-------SEEEEEEECCTTCCCG----GGCSSCH--HHHHHHHHGGGGGSTTCCSCTTCEEEEEE
T ss_pred             CCCCCCCCEEEE-CC-------CCEEEEEECCCCCCCC----CCCCCCH--HHHHHHHHHHHHHHCCCCCCCCCEEEECE
T ss_conf             885322317998-89-------9179988567333556----6654590--89869999999972455678982783048


Q ss_pred             ECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEEECCCCC
Q ss_conf             045114102337985799999988963078579999999999-999999997106998617688
Q gi|254780460|r  109 VSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCLTIDRGV  171 (172)
Q Consensus       109 ~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl~~de~~  171 (172)
                      ++.+.+.+...+.....  .+. .+..........+|..++- +|+++++++++.+.-.+.+.+
T Consensus       245 i~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~di~l~d~~G~~~~~~~gl~~~~v~~~~~  305 (308)
T 3kg8_A          245 IDKFTFYNSSDNDLLWC--YTC-GSKDKQSGEKFKADIQLFDQHGQLVAQVIGFEGRKANPKIL  305 (308)
T ss_dssp             EEEEEECCCCCCSEEEE--EEE-EEECSSCTTEEEEEEEEECTTSCEEEEEEEEEEEEECGGGG
T ss_pred             EEEEEEECCCCCCEEEE--EEE-EECCCCCCCEEEEEEEEECCCCCEEEEEEEEEEEECCHHHH
T ss_conf             95999972488875999--999-30466689889999999989999999997689987899997


No 40 
>>3kg7_A CURH; polyketide synthase, double hotdog fold, dehydratase; 2.77A {Lyngbya majuscula} (A:)
Probab=95.25  E-value=0.14  Score=29.25  Aligned_cols=122  Identities=14%  Similarity=0.099  Sum_probs=71.5

Q ss_pred             CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCE-EEEEE
Q ss_conf             86412256899997184413423578875078655300455689952112757888799886401233468826-67630
Q gi|254780460|r   31 KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKG-RAVSV  109 (172)
Q Consensus        31 ~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~-~~~~~  109 (172)
                      +|.|..|.++.. ..       +.+.++..++.+.......   ..+-|  ..++++.|++.++.......... .-.++
T Consensus       165 G~~fq~i~~i~~-~~-------~~~~a~~~~~~~~~~~~~~---~~~hP--~llD~~~q~~~~~~~~~~~~~~~~lP~~i  231 (293)
T 3kg7_A          165 GPXLQAVRQAWI-GE-------ETSLLEIEVPKALAFQLAG---EPIHP--VLIDACTRLTPDLFDFSSDSGVFWAPWRV  231 (293)
T ss_dssp             CTTTCCEEEEEE-CS-------SCEEEEEECCTTTGGGCCS---CSSCH--HHHHHTTSCCTTGGGSCCSSCCEEEEEEE
T ss_pred             CCCCCCCEEEEE-CC-------CEEEEEEECCCCCCCCCCC---CCCCH--HHHHHHHHHHHHHHCCCCCCCCEEEEEEE
T ss_conf             764332307999-79-------8058888548411345556---65687--89889999999973555678953410799


Q ss_pred             CCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEEECC
Q ss_conf             45114102337985799999988963078579999999999-999999997106998617
Q gi|254780460|r  110 SNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCLTID  168 (172)
Q Consensus       110 ~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl~~d  168 (172)
                      +.+.+.++......   +.+..+...........+|..++- ||+++++++++.+.-.+.
T Consensus       232 ~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~di~v~d~~G~~l~~i~g~~~~~v~~  288 (293)
T 3kg7_A          232 KEXTLSHPTPSRFY---AYVEEPSRVNEQLQTRSYDIQLLDETGQAFGRINGFTVKRAPS  288 (293)
T ss_dssp             EEEEESSCCCSEEE---EEECSCCEEETTTTEEEEEEEEECSSSBEEEEEEEEEEEEECH
T ss_pred             EEEEEECCCCCEEE---EEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEEEEEEECCH
T ss_conf             89999668997399---9999932447889769999999999999999998699999998


No 41 
>>2ov9_A Hypothetical protein; rhodococcus SP. RHA1, RHA08564, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Rhodococcus SP} (A:)
Probab=94.88  E-value=0.28  Score=27.55  Aligned_cols=101  Identities=15%  Similarity=0.118  Sum_probs=64.1

Q ss_pred             EEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEE
Q ss_conf             35788750786553004556899521127578887998864012334688266763045114102337985799999988
Q gi|254780460|r   53 GVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFK  132 (172)
Q Consensus        53 G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik  132 (172)
                      |.++....+.+.  +.    -...++-|-.+.-.+-.++++....   ..........++.|+++|..|+. ++++.++.
T Consensus       110 ~~~~~~~~~~~~--~~----n~~g~vhGG~l~~~~D~~~~~~~~~---~~~~~~t~~~~i~f~~pv~~g~~-l~~~a~v~  179 (216)
T 2ov9_A          110 GSVRGTVTLTIP--YQ----GPPGHVHGGVSALLLDHVLGVANAW---GGKAGXTAQLSTRYHRPTPLFEP-LTLTGKLX  179 (216)
T ss_dssp             SCEEEEEECCGG--GB----SSTTBBCHHHHHHHHHHHHHHHHHH---TTCCCEEEEEEEEECSCCBSSSE-EEEEEEEE
T ss_pred             CEEEEEEEECHH--HC----CCCCEEEHHHHHHHHHHHHHHHHHH---CCCCEEEEEEEEEEEECCCCCCE-EEEEEEEE
T ss_conf             989999998989--96----9998025889999999999999970---59972777888888444677968-99999999


Q ss_pred             EEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEEE
Q ss_conf             963078579999999999-9999999971069986
Q gi|254780460|r  133 KILRGRVVLGAADGWVKV-NGKEIYQANDLRVCLT  166 (172)
Q Consensus       133 ~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl~  166 (172)
                      ++   ++..++.++.++. ||+++++++-..+.+-
T Consensus       180 ~~---~~r~~~v~~~i~~~~g~~~a~a~~~~v~~~  211 (216)
T 2ov9_A          180 SV---DGRKITTAGDIRTADGQVCVSVEGLFVDKT  211 (216)
T ss_dssp             EE---ETTEEEEEEEEECTTCCEEEEEEEEEEC--
T ss_pred             EE---CCCEEEEEEEEEECCCCEEEEEEEEEEECC
T ss_conf             96---797999999999599999999999999658


No 42 
>>3e29_A Uncharacterized protein Q7WE92_borbr; Q7WE92 NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Bordetella bronchiseptica} (A:)
Probab=94.66  E-value=0.32  Score=27.21  Aligned_cols=117  Identities=8%  Similarity=0.049  Sum_probs=70.2

Q ss_pred             CCCC--EEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
Q ss_conf             8641--22568999971844134235788750786553004556899521127578887998864012334688266763
Q gi|254780460|r   31 KPPM--LMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVS  108 (172)
Q Consensus        31 ~~p~--lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~  108 (172)
                      .+||  .|=-+|++++++       +++.+..++++  +..+|.  -.++-|..+...+--++++.+.....  ......
T Consensus        15 ~~p~~~~lg~~i~~~~~g-------~~~~~~~~~~~--~~~~~~--~G~~hGG~l~~l~D~~~~~~~~~~~~--~~~vt~   81 (144)
T 3e29_A           15 RSPFNRWLGXSVLEAGEQ-------GIVLGIKWREE--LISSPE--IRSTHGGILATLVDAAGDYAVALKTG--HPVPTX   81 (144)
T ss_dssp             TCHHHHHTTCEEEEESSS-------CEEEEECCCGG--GBSCTT--TTCBCHHHHHHHHHHHHHHHHHHHHS--SCCCEE
T ss_pred             CCCHHHHHCCEEEEEECC-------EEEEEEECCHH--HCCCCC--CCEEECCCCCCCCCCCCCEEEEECCC--CCEEEE
T ss_conf             685899809899999699-------99999992899--928888--86581453212345501013451169--832789


Q ss_pred             ECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEE
Q ss_conf             045114102337985799999988963078579999999999-999999997106998
Q gi|254780460|r  109 VSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCL  165 (172)
Q Consensus       109 ~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl  165 (172)
                      -.++.|.+++.+|+  ++.+.+   +.+.++...+.+++++- ||+++++++-..+.+
T Consensus        82 ~~~i~fl~p~~~g~--v~~~a~---v~~~gr~~~~~~~~v~~~~g~~va~a~~t~~~~  134 (144)
T 3e29_A           82 DXHVDYHRVATPGD--LRAEGQ---VIHFGKRFATAHARVLDXDGNLVASGRALYLIR  134 (144)
T ss_dssp             EEEEEECSCCCSSC--EEEEEE---EEEECSSEEEEEEEEEETTCCEEEEEEEEEECC
T ss_pred             EEEEEEECCCCCCE--EEEEEE---EEEECCCEEEEEEEEEECCCCEEEEEEEEEEEC
T ss_conf             98999962699977--999999---999489799999999979999999999999956


No 43 
>>3kg6_A CURF; polyketide synthase, double hotdog fold, dehydratase; 2.70A {Lyngbya majuscula} (A:)
Probab=94.63  E-value=0.32  Score=27.17  Aligned_cols=76  Identities=12%  Similarity=0.072  Sum_probs=45.3

Q ss_pred             EEEEEEEECCCCC-CCCCCCC-CCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEC-CCCCEEEEEE
Q ss_conf             3578875078655-3004556-89952112757888799886401233468826676304511410233-7985799999
Q gi|254780460|r   53 GVVRAEMDITPNL-WFFDCHF-KNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVT-PDCKLVEYGI  129 (172)
Q Consensus        53 G~i~aek~i~~d~-wff~gHF-p~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~-Pgd~~i~~~i  129 (172)
                      +.++.+..++.++ +|+.+|- -+.|++||+..+|.+++++.....      ......+.+++|..++. +.+..+++++
T Consensus        18 ~~~~~~~~l~~~~~~~l~dH~v~g~~i~P~~~~lel~~~a~~~~~~------~~~~~~l~di~~~~pl~~~~~~~~~~~i   91 (285)
T 3kg6_A           18 DQHRFQSYIGAESPGYLNHHQVFGKVLFPSTGYLEIAASAGKSLFT------SQEQVVVSDVDILQSLVIPETEIKTVQT   91 (285)
T ss_dssp             SEEEEEEEEBTTBTGGGGGEEETTEEECCHHHHHHHHHHHHHHHCC------SSSEEEEEEEEECSCCEECTTCCEEEEE
T ss_pred             CEEEEEEEECCCCCCHHHCCEECCEEEECHHHHHHHHHHHHHHHCC------CCCCEEEEEEEEEECCCCCCCCCEEEEE
T ss_conf             8189999987886975217889999983279999999999998526------5774699989998233028999889999


Q ss_pred             EEEEE
Q ss_conf             98896
Q gi|254780460|r  130 DFKKI  134 (172)
Q Consensus       130 ~ik~v  134 (172)
                      .+...
T Consensus        92 ~l~~~   96 (285)
T 3kg6_A           92 VVSFA   96 (285)
T ss_dssp             EEEEE
T ss_pred             EEECC
T ss_conf             99716


No 44 
>>1q4t_A Thioesterase; hot-DOG, hydrolase; HET: 4CO; 1.60A {Arthrobacter SP} (A:)
Probab=94.58  E-value=0.33  Score=27.09  Aligned_cols=118  Identities=9%  Similarity=-0.099  Sum_probs=68.3

Q ss_pred             CCCCE--EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCC-CCCCCCEEEE
Q ss_conf             86412--25689999718441342357887507865530045568995211275788879988640123-3468826676
Q gi|254780460|r   31 KPPML--MFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGW-LGELGKGRAV  107 (172)
Q Consensus        31 ~~p~l--miDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~-~~~~~~~~~~  107 (172)
                      .+||.  +=-++.++++       |+++....++++  +..    ....+-|..+.-.+--++++.+.. ..........
T Consensus        27 ~~p~~~~lg~~~~~~~~-------g~~~~~~~~~~~--~~n----~~g~vhGG~l~~l~D~~~~~~~~~~~~~~~~~~~t   93 (151)
T 1q4t_A           27 EQTLDGTVGFVIDEMTP-------ERATASVEVTDT--LRQ----RWGLVHGGAYCALAEMLATEATVAVVHEKGMMAVG   93 (151)
T ss_dssp             GGSHHHHHTCEEEEECS-------SEEEEEEECCGG--GBC----TTSSBCHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             HHHHHHHCCEEEEEEEC-------CEEEEEEECCHH--HCC----CCCCEEHHHEEEEHHCCCCCEEEEEECCCCCEEEE
T ss_conf             44476406849999809-------989999987989--949----99827246335413304411257650677706775


Q ss_pred             EECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEEE
Q ss_conf             3045114102337985799999988963078579999999999-9999999971069986
Q gi|254780460|r  108 SVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCLT  166 (172)
Q Consensus       108 ~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl~  166 (172)
                      ...+++|++++.+|+-  +.+.+   +.+.++..++.+++++. +|+++++++.-.+-+-
T Consensus        94 ~~l~i~f~~pv~~g~i--~~~a~---~~~~~~~~~~~~~~v~~~~g~~~a~a~~t~~~~~  148 (151)
T 1q4t_A           94 QSNHTSFFRPVKEGHV--RAEAV---RIHAGSTTWFWDVSLRDDAGRLCAVSSMSIAVRP  148 (151)
T ss_dssp             EEEEEEESSCCCSSEE--EEEEE---EEEECSSEEEEEEEEECTTCCEEEEEEEEEEEEE
T ss_pred             EEEEEEEEECCCCCCE--EEEEE---EEECCCCEEEEEEEEECCCCCEEEEEEEEEEEEC
T ss_conf             5335578500379943--89999---9985788999999999899999999989998867


No 45 
>>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* (A:833-1109)
Probab=93.45  E-value=0.36  Score=26.87  Aligned_cols=73  Identities=12%  Similarity=0.136  Sum_probs=45.9

Q ss_pred             EEEEEECCCCCCCCCCC-CCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEE-CCCCCEEEEEEE
Q ss_conf             78875078655300455-68995211275788879988640123346882667630451141023-379857999999
Q gi|254780460|r   55 VRAEMDITPNLWFFDCH-FKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMV-TPDCKLVEYGID  130 (172)
Q Consensus        55 i~aek~i~~d~wff~gH-Fp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V-~Pgd~~i~~~i~  130 (172)
                      +....+++.+++|.++| .-+.||+||+..+|.+++++.-.....   .......+.+++|..++ ++.+..+...+.
T Consensus        30 ~~~~l~~~~~~~~l~dH~v~g~~vlP~~~~le~~~~a~~~~~~~~---~~~~~~~l~~i~~~~pl~l~~~~~~~i~~~  104 (277)
T 2vz8_A           30 YKFDVSPESPDHYLVDHCIDGRVLFPGTGYLWLTWKTLARALSQN---LEETPVVFEDVTLHQATILPKTGTVSLEVR  104 (277)
T ss_dssp             EEEECSTTSGGGGGGGCEETTEEECCHHHHHHHHHHHHHHHTTCC---GGGCCEEEEEEEECSCCEECSSSEEEEEEE
T ss_pred             CCCCCCCCCCHHHHCCEEECCEEEEECHHHHHHHHHHHHHHHCCC---CCCCCEEEEEECCCCCCEECCCCCEEEEEE
T ss_conf             025768543101102102588288504648999999999751455---665752886530346717579986899999


No 46 
>>3kg9_A CURK; polyketide synthase, double hotdog fold, dehydratase; 1.70A {Lyngbya majuscula} (A:)
Probab=93.43  E-value=0.56  Score=25.76  Aligned_cols=74  Identities=14%  Similarity=0.096  Sum_probs=36.9

Q ss_pred             EEEEEEECCCCC-CCCCCCCC-CCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECC-CCCEEEEEEE
Q ss_conf             578875078655-30045568-99521127578887998864012334688266763045114102337-9857999999
Q gi|254780460|r   54 VVRAEMDITPNL-WFFDCHFK-NDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTP-DCKLVEYGID  130 (172)
Q Consensus        54 ~i~aek~i~~d~-wff~gHFp-~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~P-gd~~i~~~i~  130 (172)
                      .++.+..++.++ +|..+|-. +.||+||+..+|.+++++.....      ......+.+++|..++.- .+..+.+++.
T Consensus        24 ~~~~~~~~~~~~~~~l~dH~v~g~~vlP~a~~~e~~~~a~~~~~~------~~~~~~~~~v~~~~pl~~~~~~~~~i~v~   97 (296)
T 3kg9_A           24 QHHFQSYLTAESPAYLSQHQVFNKVLFPATGYLEIAAAVGKNLLT------TGEQVVVSDVTIVRGLVIPETDIKTVQTV   97 (296)
T ss_dssp             EEEEEEEEETTBSGGGGGEEETTEEBCCHHHHHHHHHHHHHHSCC------SSCEEEEEEEEECSCCBCCTTCEEEEEEE
T ss_pred             EEEEEEEECCCCCCCCCCCEECCEEEEEHHHHHHHHHHHHHHHCC------CCCCEEEEEEEECCCCCCCCCCCEEEEEE
T ss_conf             289999988887973148899999986279999999999998527------88747999889825630489998799999


Q ss_pred             EEE
Q ss_conf             889
Q gi|254780460|r  131 FKK  133 (172)
Q Consensus       131 ik~  133 (172)
                      +..
T Consensus        98 ~~~  100 (296)
T 3kg9_A           98 IST  100 (296)
T ss_dssp             EEE
T ss_pred             EEE
T ss_conf             972


No 47 
>>2eis_A Hypothetical protein TTHB207; COA binding motif, NPPSFA, national project on protein structural and functional analyses; HET: COA; 2.10A {Thermus thermophilus HB8} (A:)
Probab=93.19  E-value=0.61  Score=25.53  Aligned_cols=101  Identities=14%  Similarity=-0.026  Sum_probs=63.5

Q ss_pred             EEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEE
Q ss_conf             78875078655300455689952112757888799886401233468826676304511410233798579999998896
Q gi|254780460|r   55 VRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKI  134 (172)
Q Consensus        55 i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v  134 (172)
                      ++.+..|.+.+=      -..-++-|.....-+-.+.+.++. .............+++|++++.+||. ++.+.++.++
T Consensus         4 ~~~~~~V~~~~~------d~~G~v~gg~~~~~~d~a~~~~~~-~~~~~~~~~~~~~~i~f~~p~~~gd~-l~~~~~v~~~   75 (133)
T 2eis_A            4 TRXVYPVFPGET------NHYGTLFGGTVLAWXDQAAFVAAT-RHARKKVVTVHADAVDFKRPVPLGAI-VELVARLKEV   75 (133)
T ss_dssp             EEEEEECCGGGB------CTTSBBCHHHHHHHHHHHHHHHHH-HHHTSCEEEEEEEEEEECSCCBTTCE-EEEEEEEEEE
T ss_pred             EEEEEEECHHHC------CCCCCCHHHHHHHHHHHHHHHHHH-HHCCCCCCEEEEEEEEEEECCCCCCE-EEEEEEEEEC
T ss_conf             199999883345------889829499999999999999999-85699862799878999720167748-9999999982


Q ss_pred             ECCCCEEEEEEEEEEEC-------CEEEEEEEEEEEEEE
Q ss_conf             30785799999999999-------999999971069986
Q gi|254780460|r  135 LRGRVVLGAADGWVKVN-------GKEIYQANDLRVCLT  166 (172)
Q Consensus       135 ~~~~~~~~~~~g~~~vd-------g~~i~~a~~l~vgl~  166 (172)
                         ++..+..+++++..       ++++++++-..+.+-
T Consensus        76 ---g~~s~~~~~~~~~~~~~~~~~~~lva~a~~t~v~~~  111 (133)
T 2eis_A           76 ---GRTSXRVEVEXWVEPVKEGEEAYLAARGGFVLVAVD  111 (133)
T ss_dssp             ---CSSEEEEEEEEEECCCSTTCCCEEEEEEEEEEEEBC
T ss_pred             ---CCEEEEEEEEEEEEECCCCCEEEEEEEEEEEEEEEC
T ss_conf             ---554399989999960677978999999999999989


No 48 
>>3kg7_A CURH; polyketide synthase, double hotdog fold, dehydratase; 2.77A {Lyngbya majuscula} (A:)
Probab=93.06  E-value=0.37  Score=26.83  Aligned_cols=60  Identities=18%  Similarity=0.197  Sum_probs=44.2

Q ss_pred             CCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCC-CCCCCCC-CCCCEEEHHHHHHHHHHHHHH
Q ss_conf             89986412256899997184413423578875078655-3004556-899521127578887998864
Q gi|254780460|r   28 QLPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNL-WFFDCHF-KNDPVMPGCLGLDALWQLTGF   93 (172)
Q Consensus        28 rLP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~-wff~gHF-p~~PvmPGvL~iEa~~Ql~~~   93 (172)
                      +++.++--|+++.+.....      +..+.+..++.++ ||..+|- -+.||+||+..+|.+++++.-
T Consensus         3 ~~~~~~hpllg~~~~~~~~------~~~~~~~~l~~~~~p~l~dH~v~g~~vlP~~~~le~~~~a~~~   64 (293)
T 3kg7_A            3 ASGQQVHRLLGNKLELAST------GQTIYHQDINLNNHPWIGDHRVYDTPVIPGVSYIAXTLAAVGV   64 (293)
T ss_dssp             -----CBTTTBEEEECTTT------CCEEEEEEESTTTCGGGGGEEETTEEBCCTTHHHHHHHHHHCS
T ss_pred             CCCCCCCCCCCCCCCCCCC------CCEEEEEEECCCCCCCCCCCEECCEEEECHHHHHHHHHHHHHC
T ss_conf             8889988889973456899------9479999987887960006789999995779999999998524


No 49 
>>1sh8_A Hypothetical protein PA5026; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.50A {Pseudomonas aeruginosa} (A:)
Probab=91.37  E-value=1  Score=24.17  Aligned_cols=122  Identities=16%  Similarity=0.046  Sum_probs=71.8

Q ss_pred             CCCCE-EEE-EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCC-CCCC-EEE
Q ss_conf             86412-256-8999971844134235788750786553004556899521127578887998864012334-6882-667
Q gi|254780460|r   31 KPPML-MFH-RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLG-ELGK-GRA  106 (172)
Q Consensus        31 ~~p~l-miD-rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~-~~~~-~~~  106 (172)
                      .+||. .+. ||.+++++       +++.+..+.++   ..    ....|-|-.+. +++-..+.++.... .... ...
T Consensus        17 ~~p~~~~lg~~i~~~~~g-------~~~~~~~~~~~---~n----~~g~~hGG~~~-~laD~a~g~a~~~~~~~~~~~~~   81 (154)
T 1sh8_A           17 KIAFVQRSGLRAEVLEPG-------YVRLRMPGAGN---EN----HIGSMYAGALF-TLAELPGGALFLTSFDSARFYPI   81 (154)
T ss_dssp             SSHHHHHHTCEEEEEETT-------EEEEEECSTTC---BC----TTSSBCHHHHH-HHHHTHHHHHHHHHSCTTTEEEE
T ss_pred             HCHHHHHCCCEEEEEECC-------EEEEEEECCCC---CC----CCCCEEEEHHH-HHHHHHHHHHHHHHCCCCCCEEE
T ss_conf             374999749799999799-------99999985720---18----98718982116-76889999999962788880699


Q ss_pred             EEECCCEEEEEECCCCCEEEEEEE------EE-EEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEEECC
Q ss_conf             630451141023379857999999------88-963078579999999999-999999997106998617
Q gi|254780460|r  107 VSVSNIKFRGMVTPDCKLVEYGID------FK-KILRGRVVLGAADGWVKV-NGKEIYQANDLRVCLTID  168 (172)
Q Consensus       107 ~~~~~vkfr~~V~Pgd~~i~~~i~------ik-~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl~~d  168 (172)
                      ..--++.|.+++..|. ++++++.      +. ++.+.++..++.+++++. ||+++++++....-+-.+
T Consensus        82 t~~~~v~f~~p~~~g~-~~~~~~~~~~~~~~~~~~~~~gr~~~~~~~~i~~~~G~~~a~~~~~~~~~~~~  150 (154)
T 1sh8_A           82 VKEMTLRFRRPAKGDI-RVEARLDAERIRQLETEAGERGKAEYSLELQLTDEQGEVVAESAALYQLRSHA  150 (154)
T ss_dssp             EEEEEEEECSCCCSCE-EEEEECCHHHHHHHHHHHHHHSEEEEEEEEEEECTTCCEEEEEEEEEEEEECC
T ss_pred             EEEEEEEEEECCCCCE-EEEEEEEEEHHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEEEEEEEECCCC
T ss_conf             9873568850457868-99999721157678888751683699999999979999999999999997799


No 50 
>>1vh9_A P15, hypothetical protein YBDB; structural genomics, unknown function; 2.15A {Escherichia coli} (A:)
Probab=91.29  E-value=1  Score=24.12  Aligned_cols=118  Identities=12%  Similarity=-0.056  Sum_probs=73.8

Q ss_pred             CCCCCCE--EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf             9986412--25689999718441342357887507865530045568995211275788879988640123346882667
Q gi|254780460|r   29 LPKPPML--MFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRA  106 (172)
Q Consensus        29 LP~~p~l--miDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~  106 (172)
                      +..+||.  |=-|+.++++       |+++.+..++++      |.-...++-|..+.-.+-.++++..... .......
T Consensus        17 ~~~~p~~~~lg~~~~~~~~-------~~~~~~~~~~~~------~~n~~g~vhGG~~~~l~D~a~g~~~~~~-~~~~~~~   82 (149)
T 1vh9_A           17 TSDNTMVAHLGIVYTRLGD-------DVLEAEMPVDTR------THQPFGLLHGGASAALAETLGSMAGFMM-TRDGQCV   82 (149)
T ss_dssp             TSTTSHHHHTTCEEEEECS-------SCEEEEEECSTT------TBCTTSSBCHHHHHHHHHHHHHHHHHTT-CCTTCCE
T ss_pred             HCCCHHHHHCCCEEEEEEC-------CEEEEEEECCHH------HCCCCCCCCCEEEEEEHHHHHHHHHHHH-CCCCCEE
T ss_conf             4733188856959999969-------989999984999------9199982725014550557899999752-2466445


Q ss_pred             EEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEE
Q ss_conf             63045114102337985799999988963078579999999999-99999999710699
Q gi|254780460|r  107 VSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVC  164 (172)
Q Consensus       107 ~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vg  164 (172)
                      ..++..-|..++.+|+. ++.+.++   .+.++..++.+++++. ||+++++++-..+-
T Consensus        83 ~~~~~~~~~~~~~~g~~-v~~~a~v---~~~g~~~~~v~~~~~~~~g~~va~a~~t~~~  137 (149)
T 1vh9_A           83 VGTELNATHHRPVSEGK-VRGVCQP---LHLGRQNQSWEIVVFDEQGRRCCTCRLGTAV  137 (149)
T ss_dssp             EEEEEEEEECSCCCSSE-EEEEEEE---EEECSSEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred             EEEEEEEEEECCCCCCE-EEEEEEE---EEECCCEEEEEEEEECCCCCEEEEEEEEEEE
T ss_conf             52001113551368976-9999999---9807889999999990899899999899999


No 51 
>>3e8p_A Uncharacterized protein; X-RAY Q8E9M7 SOR246 NESG structure, structural genomics, PSI-2, protein structure initiative; 2.30A {Shewanella oneidensis} (A:)
Probab=91.19  E-value=1.1  Score=24.06  Aligned_cols=115  Identities=10%  Similarity=0.079  Sum_probs=67.4

Q ss_pred             CCCCCC--EEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCC--CCC--
Q ss_conf             998641--22568999971844134235788750786553004556899521127578887998864012334--688--
Q gi|254780460|r   29 LPKPPM--LMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLG--ELG--  102 (172)
Q Consensus        29 LP~~p~--lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~--~~~--  102 (172)
                      .+.+||  +|=-||++++++       +++.+..++++..-.    +....+-|-.+.= ++...+.++....  ...  
T Consensus        28 ~~~~p~~~~lg~~i~~~~~~-------~~~~~~~~~~~~~n~----~~~G~vHGG~~~t-laD~~~g~~~~~~~~~~~~~   95 (164)
T 3e8p_A           28 DQHVPFHNLLGLDIKRYDID-------GVEVAINXKPELIGN----IHQQILHGGVTAT-VLDVVGGLTAFAGLVASRDD   95 (164)
T ss_dssp             HHSCHHHHHHTCEEEEESSS-------CEEEEEECCGGGEEE----TTTTEECHHHHHH-HHHHHHHHHHHHHHHTTCSC
T ss_pred             HHCCCHHHHCCCEEEEEECC-------EEEEEEECCHHHCCC----CCCCEEECCHHHH-HHHHHHHHHHHHHCCCCCCC
T ss_conf             62588899789899999699-------899999858999088----9897573313156-78899999999744322233


Q ss_pred             ---------CEEE-EEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEE
Q ss_conf             ---------2667-63045114102337985799999988963078579999999999-9999999971
Q gi|254780460|r  103 ---------KGRA-VSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQAND  160 (172)
Q Consensus       103 ---------~~~~-~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~  160 (172)
                               ..+. ..--++.|.+++..+.  ++.+.   ++.+.++..++.+++++. ||+++++++-
T Consensus        96 ~~~~~~~~~~~~~vt~~l~v~fl~p~~~~~--i~~~a---~~~~~gr~~~~v~~~i~~~~g~lva~~~~  159 (164)
T 3e8p_A           96 WTIEELQQRLQTLGTIDXRVDYLRPGRGQI--FTGTG---SVIRAGNRVSVCRXELHNEQGTHIAFGTG  159 (164)
T ss_dssp             CCHHHHHHHHHHCEEEEEEEEECSCCCCSE--EEEEE---EEEECCSSEEEEEEEEEETTCCEEEEEEE
T ss_pred             CCCCCCCCCCCCEEEEEEEEEEECCCCCCE--EEEEE---EEEECCCCEEEEEEEEEECCCCEEEEEEE
T ss_conf             211112345651267787999863676756--99999---99985897999999999699999999999


No 52 
>>2oiw_A Putative 4-hydroxybenzoyl-COA thioesterase; structural genomics, PSI-2, protein structure initiative; 2.00A {Geobacillus stearothermophilus} (A:)
Probab=89.93  E-value=1.4  Score=23.39  Aligned_cols=107  Identities=9%  Similarity=-0.051  Sum_probs=62.2

Q ss_pred             EEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEEC
Q ss_conf             87507865530045568995211275788879988640123346882667630451141023379857999999889630
Q gi|254780460|r   57 AEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILR  136 (172)
Q Consensus        57 aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~  136 (172)
                      .+..|.+.+==+.||-.+ +...- .+-+|-...+.-+.......+.+....-.+++|++++.+||.+ +.+..+..+  
T Consensus         7 ~~~~V~~~d~D~~g~v~~-~~y~~-~~~~ar~~~~~~~g~~~~~~~~~~~v~~~~i~y~~~~~~gd~i-~v~~~~~~~--   81 (136)
T 2oiw_A            7 TVITPRVSETDGVGHINN-TTVPV-WFEAGRHEIFKLFTPDLSFKRWRXVIIRXEVDYVNQXYYGQDV-TVYTGIERI--   81 (136)
T ss_dssp             EEECCCGGGBCTTSSBCG-GGHHH-HHHHHTHHHHHHHSTTCCGGGCCEEEEEEEEEECSCCCTTSCE-EEEEEEEEE--
T ss_pred             EEEEECHHHCCCCCCCCH-HHHHH-HHHHHHHHHHHCCCCCCHHCCCCEEEEEEEEEEEEECCCCCCC-CEEEEEEEC--
T ss_conf             988807257788883546-99999-9999987544034566000587358778998863412579763-146898861--


Q ss_pred             CCCEEEEEEEEEEECCEEEEEEEEEEEEEECCC
Q ss_conf             785799999999999999999971069986176
Q gi|254780460|r  137 GRVVLGAADGWVKVNGKEIYQANDLRVCLTIDR  169 (172)
Q Consensus       137 ~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~de  169 (172)
                       ++..+.....++.+|+++++++...|.+-.+.
T Consensus        82 -~~~s~~~~~~i~~~g~~~a~~~~~~v~~d~~~  113 (136)
T 2oiw_A           82 -GNTSLTIYEEIHQNGVVCAKGRSVYVNFNFDT  113 (136)
T ss_dssp             -CSSEEEEEEEEEETTEEEEEEEEEEEEEETTT
T ss_pred             -CCEEEEEEEEECCCCEEEEEEEEEEEEEECCC
T ss_conf             -97499999999189879999999999998999


No 53 
>>1y7u_A Acyl-COA hydrolase; structural genomics, coenzyme A, protein structure initiative, PSI, midwest center for structural genomics, MCSG; HET: COA; 2.80A {Bacillus cereus} (A:1-156)
Probab=89.89  E-value=1.4  Score=23.37  Aligned_cols=103  Identities=12%  Similarity=-0.037  Sum_probs=64.5

Q ss_pred             EEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEE
Q ss_conf             35788750786553004556899521127578887998864012334688266763045114102337985799999988
Q gi|254780460|r   53 GVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFK  132 (172)
Q Consensus        53 G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik  132 (172)
                      |.++....+.+.      |--...++-|..+...+-.+++.. ...............++.|++++..|+ .++++.+  
T Consensus        18 ~~~~~~~~~~~~------~~n~~G~vhGG~~~~l~d~a~~~~-~~~~~~~~~~~t~~~~i~f~~pv~~g~-~i~~~a~--   87 (156)
T 1y7u_A           18 SRVFKTSRVFPT------DLNDHNTLFGGKILSEXDXVASIS-ASRHSRKECVTASXDWVDFLHPVRSSD-CVSYESF--   87 (156)
T ss_dssp             GCEEEEEECCGG------GBCTTSSBCHHHHHHHHHHHHHHH-HHHHHCSEEEEEEECCCCCCSCCCTTC-EEEEEEE--
T ss_pred             CEEEEEEEECHH------HCCCCCCEEHHHHHHHHHHHHHHH-HHHHCCCCCEEEEEEEEEEEECCCCCC-EEEEEEE--
T ss_conf             648999997823------368788353899999999999999-999728996189982589850357895-7999999--


Q ss_pred             EEECCCCEEEEEEEEEEE------CCEEEEEEEEEEEEEE
Q ss_conf             963078579999999999------9999999971069986
Q gi|254780460|r  133 KILRGRVVLGAADGWVKV------NGKEIYQANDLRVCLT  166 (172)
Q Consensus       133 ~v~~~~~~~~~~~g~~~v------dg~~i~~a~~l~vgl~  166 (172)
                       +.+.++..++.+++++.      ++++++++..-.+.+-
T Consensus        88 -v~~~g~~~~~v~~~i~~~d~~~~~~~~~a~a~~t~v~~~  126 (156)
T 1y7u_A           88 -VIWTGRTSXEVFVKVVSEYLISGEKRIAATSFVTFVALS  126 (156)
T ss_dssp             -EEEECSSEEEEEEEEEEECTTTCCEEEEEEEEEEEEEEC
T ss_pred             -EEECCCCEEEEEEEEEEEECCCCCEEEEEEEEEEEEEEC
T ss_conf             -701588228999999997077892899867799999987


No 54 
>>2gf6_A Conserved hypothetical protein; 13815598, structural genomics, PSI, protein structure initiative, joint center for structural genomics; HET: COA; 1.91A {Sulfolobus solfataricus} (A:)
Probab=88.24  E-value=1.8  Score=22.67  Aligned_cols=107  Identities=6%  Similarity=-0.241  Sum_probs=60.7

Q ss_pred             EEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH-CCC--CCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEE
Q ss_conf             887507865530045568995211275788879988640-123--34688266763045114102337985799999988
Q gi|254780460|r   56 RAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFF-LGW--LGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFK  132 (172)
Q Consensus        56 ~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~-~~~--~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik  132 (172)
                      +.+..|.+.+==..||-.+ ..... .+-||....+.-+ ...  ....+......-.+++|++++.+||. ++.+..+ 
T Consensus         8 ~~~~~V~~~d~D~~g~v~~-~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~vv~~~~i~y~~~~~~gd~-i~v~~~v-   83 (135)
T 2gf6_A            8 VFEDVVRIYDTDAQGIAHY-AAYYR-FFTNTIEKFIKEKVGIPYPIVNENLWFVIAESHAIYHRPVKLGDK-LTVLLNP-   83 (135)
T ss_dssp             EEEEECCGGGBCTTSSBCH-HHHHH-HHHHHHHHHHHHHHCSCSSEEETTEEEEEEEEEEEECSCCCTTCE-EEEEEEE-
T ss_pred             EEEEEECHHHCCCCCCCCH-HHHHH-HHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEEEEEEEEEHHHCCH-HHEEEEE-
T ss_conf             9998948888088881557-99999-999988999887406616666348614899873001131000310-1101232-


Q ss_pred             EEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEECC
Q ss_conf             963078579999999999999999997106998617
Q gi|254780460|r  133 KILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTID  168 (172)
Q Consensus       133 ~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~d  168 (172)
                        ...++..+.....++.+|+++++++...+-+-.+
T Consensus        84 --~~~~~~~~~~~~~i~~~g~~~a~~~~~~v~~d~~  117 (135)
T 2gf6_A           84 --KILSNKTIKFEFKVLKDGELTTEGYVIQIAINPK  117 (135)
T ss_dssp             --EECSSSEEEEEEEEEETTEEEEEEEEEEEEEETT
T ss_pred             --CCCCCCEEEEEEEECCCCEEEEEEEEEEEEEECC
T ss_conf             --2467879999999714987999999999999999


No 55 
>>3hrq_A PKS, aflatoxin biosynthesis polyketide synthase; hot-DOG fold, iterative type I PKS, norsolorinic acid, product template domain; HET: PLM; 1.80A {Aspergillus parasiticus} PDB: 3hrr_A* (A:)
Probab=88.14  E-value=1.9  Score=22.63  Aligned_cols=117  Identities=12%  Similarity=0.052  Sum_probs=60.4

Q ss_pred             CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCC--CCC--EEE
Q ss_conf             8641225689999718441342357887507865530045568995211275788879988640123346--882--667
Q gi|254780460|r   31 KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGE--LGK--GRA  106 (172)
Q Consensus        31 ~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~--~~~--~~~  106 (172)
                      ++.|.-|.+|..-+. .       ..++-.++.+......+|.-+   |  -.++|+.|++.+++.....  ...  ..-
T Consensus       199 g~~f~~i~~i~~~~~-~-------~~a~~~~~~~~~~~~~~~~~h---P--~llDa~lq~~~~~~~~~~~~~~~~~~~iP  265 (357)
T 3hrq_A          199 NPDYMLLDYLVLNEA-E-------NEAASGVDFSLGSSEGTFAAH---P--AHVDAITQVAGFAMNANDNVDIEKQVYVN  265 (357)
T ss_dssp             CGGGCCEEEEEEEGG-G-------TEEEEEEEGGGSCCCSCCSSC---H--HHHHHHHHHHHHHHHTSTTCCTTTEEEEE
T ss_pred             CCCCCCCHHEEECCC-C-------EEEEEEECCCCCCCCCCCCCC---H--HHHHHHHHHHHHHHCCCCCCCCCCEEEEC
T ss_conf             774445500487498-4-------389999648777777872348---3--57778998999985066666889807951


Q ss_pred             EEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEE-ECCEEEEEEEEEEEE
Q ss_conf             6304511410233798579999998896307857999999999-999999999710699
Q gi|254780460|r  107 VSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVK-VNGKEIYQANDLRVC  164 (172)
Q Consensus       107 ~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~-vdg~~i~~a~~l~vg  164 (172)
                      .+++++++.++..|+...   .+.++ +.........+|..++ -+|+++++++++.+.
T Consensus       266 ~~i~~i~i~~~~~~~~~~---~~~~~-~~~~~~~~~~~di~~~d~~G~~~~~i~g~~~~  320 (357)
T 3hrq_A          266 HGWDSFQIYQPLDNSKSY---QVYTK-MGQAKENDLVHGDVVVLDGEQIVAFFRGLTLR  320 (357)
T ss_dssp             EEEEEEEECSCCCTTCEE---EEEEE-CCCC--CCEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred             CCCCCEEECCCCCCCCEE---EEEEE-EEECCCCCEEEEEEEEEECCCEEEEEEEEEEE
T ss_conf             312517982578999679---99999-87358998899999998099499999148999


No 56 
>>1vh5_A Hypothetical protein YDII; PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; 1.34A {Escherichia coli} (A:)
Probab=87.89  E-value=1.9  Score=22.54  Aligned_cols=119  Identities=10%  Similarity=-0.053  Sum_probs=68.1

Q ss_pred             CCCCCCE--EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf             9986412--25689999718441342357887507865530045568995211275788879988640123346882667
Q gi|254780460|r   29 LPKPPML--MFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRA  106 (172)
Q Consensus        29 LP~~p~l--miDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~  106 (172)
                      ++.+||.  |=-++.+++++       +++....+.++  +..    ....+-|-.+.-.+-.++++... .........
T Consensus        17 ~~~~p~~~~lg~~~~~~~~~-------~~~~~~~~~~~--~~n----~~g~vhGG~l~~l~D~~~~~~~~-~~~~~~~~~   82 (148)
T 1vh5_A           17 MGEGNMVGFLDIRFEHIGDD-------TLEATMPVDSR--TKQ----PFGLLHGGASVVLAESIGSVAGY-LCTEGEQKV   82 (148)
T ss_dssp             TTTTSHHHHTTCEEEEECSS-------CEEEEEECSTT--TBC----TTSSBCHHHHHHHHHHHHHHHHH-HTSCTTCEE
T ss_pred             HCCCCHHHHCCCEEEEEECC-------EEEEEEEECHH--HCC----CCCEEEHHHHHHHHHHHHHHEHH-HHCCCCEEE
T ss_conf             37350888629899999699-------89999992999--929----99826227877676644422312-233573045


Q ss_pred             EEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEE
Q ss_conf             63045114102337985799999988963078579999999999-999999997106998
Q gi|254780460|r  107 VSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCL  165 (172)
Q Consensus       107 ~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl  165 (172)
                      ..++..-|..++.+|+. ++.+.++.   +.++..++.+++++. ||+++++++-..+.+
T Consensus        83 ~t~~~~~~~~~~~~g~~-v~~~a~v~---~~g~~~~~~~~~i~~~~g~~~a~~~~t~~~~  138 (148)
T 1vh5_A           83 VGLEINANHVRSAREGR-VRGVCKPL---HLGSRHQVWQIEIFDEKGRLCCSSRLTTAIL  138 (148)
T ss_dssp             EEEEEEEEECSCCCSSE-EEEEEEEE---EECSSEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred             EEEEEEEEEECCCCCCC-CEEEEEEE---ECCCCEEEEEEEEEECCCCEEEEEEEEEEEE
T ss_conf             76666898851677875-23789999---8589899999999928998999997999998


No 57 
>>1t82_A Hypothetical acetyltransferase; structural genomics, alpha-beta dimeric protein with A fold resembling A hotdog, PSI; 1.70A {Shewanella oneidensis mr-1} (A:)
Probab=87.72  E-value=2  Score=22.48  Aligned_cols=110  Identities=12%  Similarity=0.007  Sum_probs=63.4

Q ss_pred             EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCC---CCCCCCEEEEEECCCEEE
Q ss_conf             89999718441342357887507865530045568995211275788879988640123---346882667630451141
Q gi|254780460|r   39 RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGW---LGELGKGRAVSVSNIKFR  115 (172)
Q Consensus        39 rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~---~~~~~~~~~~~~~~vkfr  115 (172)
                      ++++++++       +++.+..+++  +.-     ..+++=|-.+.=.+--++++.+..   ...........--++.|.
T Consensus        35 ~i~~~~~g-------~~~~~~~~~~--~~n-----~~g~vHGG~~a~l~D~~~g~~~~~~~~~~~~~~~~vt~~l~v~yl  100 (155)
T 1t82_A           35 APLSFTDG-------ELSVSAPLAP--NIN-----LHHTXFAGSIYTIXTLTGWGXVWLQQQLLNVDGDIVLADAHIRYL  100 (155)
T ss_dssp             EEEEEETT-------EEEEECCSGG--GBC-----TTSSBCHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEEEEEC
T ss_pred             EEEEECCC-------EEEEEECCHH--HCC-----CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEE
T ss_conf             99996298-------7999973554--157-----999711445566676767999999887557897368475778885


Q ss_pred             EEECCCCCEEEEEEEEE-----EEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEE
Q ss_conf             02337985799999988-----9630785799999999999999999971069986
Q gi|254780460|r  116 GMVTPDCKLVEYGIDFK-----KILRGRVVLGAADGWVKVNGKEIYQANDLRVCLT  166 (172)
Q Consensus       116 ~~V~Pgd~~i~~~i~ik-----~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~  166 (172)
                      +++..++. +  +.++.     ++.+.++.+.+.+++++.||+++++++-. ..+.
T Consensus       101 rpa~~~~~-~--~a~~~~~~~~~~~~~gr~~~~~~~~i~d~g~lvA~a~~t-~~v~  152 (155)
T 1t82_A          101 APVTSAPE-V--KVRWPDTNLSPLQRGRKAKVKLEVQLFCDGKLCAQFDGL-YVSV  152 (155)
T ss_dssp             SCCCSCCE-E--EEECCSCCCGGGGGTCCEEEEEEEEEEETTEEEEEEEEE-EEEE
T ss_pred             CCCCCCCE-E--EEEECHHHHHHHCCCCEEEEEEEEEEEECCEEEEEEEEE-EEEE
T ss_conf             13566748-9--999623544343138658999999999999999999999-9994


No 58 
>>1z54_A Probable thioesterase; hypothetical protein, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus HB8} (A:)
Probab=87.71  E-value=2  Score=22.48  Aligned_cols=66  Identities=15%  Similarity=0.039  Sum_probs=46.5

Q ss_pred             CCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEECCC
Q ss_conf             6882667630451141023379857999999889630785799999999999999999971069986176
Q gi|254780460|r  100 ELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTIDR  169 (172)
Q Consensus       100 ~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~de  169 (172)
                      ..+......-.++.|++++.+||. ++.+..+.++   +...+....+++.+|+++++++-..+-+-+.+
T Consensus        49 ~~~~~~~v~~~~i~y~~~~~~~d~-i~v~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~v~~d~~k  114 (132)
T 1z54_A           49 ARGVFFPVVELGLTFRAPARFGEV-VEVRTRLAEL---SSRALLFRYRVEREGVLLAEGFTRHLCQVGER  114 (132)
T ss_dssp             TTTEECCEEEEEEEECSCCCTTCE-EEEEEEEEEE---CSSEEEEEEEEEETTEEEEEEEEEEECEESSS
T ss_pred             HCCCCEEEEEEEEEEECCCCCCCE-EEEEEEEEEC---CCEEEEEEEEEEECCEEEEEEEEEEEEEECCC
T ss_conf             469615999999986100688868-9998999881---97899999999989999999999999930997


No 59 
>>3bnv_A CJ0977; virulence factor, hot-DOG fold, flagella, unknown function; HET: MSE; 2.60A {Campylobacter jejuni} (A:)
Probab=87.09  E-value=2.2  Score=22.26  Aligned_cols=118  Identities=12%  Similarity=0.026  Sum_probs=70.9

Q ss_pred             CCCCCCE--EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf             9986412--25689999718441342357887507865530045568995211275788879988640123346882667
Q gi|254780460|r   29 LPKPPML--MFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRA  106 (172)
Q Consensus        29 LP~~p~l--miDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~  106 (172)
                      ...+|+.  +=.++++++++       +++.+..+.++     .|.....++-|..+.-.+-.++++.+.     .....
T Consensus        26 ~~~~~~~~~~g~~i~~~~~g-------~~~~~~~~~~~-----~~~n~~g~~hGG~i~~l~D~~~~~a~~-----~~~~v   88 (152)
T 3bnv_A           26 LTCPELNTSLAGTIIEIDKN-------YAKSILITTSE-----XVADDQGLIFDAFIFAAANYVAQASIN-----KEFSV   88 (152)
T ss_dssp             CSSTTCCHHHHCEEEEEETT-------EEEEEEECCGG-----GBSSTTCBBCHHHHHHHHHHHHHHHHC-----CSSEE
T ss_pred             HCCCCHHHHHCEEEEEEECC-------EEEEEEEECHH-----HCCCCCCEEECHHHHHHHHHHHHHHHC-----CCCEE
T ss_conf             44830456517599999799-------99999996789-----920889707701756899999987616-----88589


Q ss_pred             EEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEE-EECCEEEEEEEEEEEEEECC
Q ss_conf             630451141023379857999999889630785799999999-99999999997106998617
Q gi|254780460|r  107 VSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWV-KVNGKEIYQANDLRVCLTID  168 (172)
Q Consensus       107 ~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~-~vdg~~i~~a~~l~vgl~~d  168 (172)
                      ....+++|++++.+|+. ++.+.+   +.+.++..++..+.+ ..+|+++++++-- ......
T Consensus        89 t~~l~i~f~~p~~~g~~-l~~~a~---v~~~g~~~~~~~~~~~~~~~~l~a~a~~t-~~~~~~  146 (152)
T 3bnv_A           89 IIGSKCFFYAPLKLGDV-LELEAH---ALFDETSKKRDVKVVGHVKEIKXFEGTIQ-VVSTDE  146 (152)
T ss_dssp             EEEEEEEECSCCBTTCE-EEEEEE---ECCCSSCSEEEEEEEEEETTEEEEEEEEE-EEECSS
T ss_pred             EEEEEEEEEEEECCCCE-EEEEEE---EEEECCCEEEEEEEEEEECCEEEEEEEEE-EEEECC
T ss_conf             97724458883059997-999999---99988977999999991099999999999-999586


No 60 
>>2egj_A Hypothetical protein AQ_1494; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.80A {Aquifex aeolicus} PDB: 2egi_A 2egr_A (A:)
Probab=86.75  E-value=2.2  Score=22.15  Aligned_cols=105  Identities=7%  Similarity=-0.142  Sum_probs=63.0

Q ss_pred             EEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCC---CCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEE
Q ss_conf             750786553004556899521127578887998864012---33468826676304511410233798579999998896
Q gi|254780460|r   58 EMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLG---WLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKI  134 (172)
Q Consensus        58 ek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~---~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v  134 (172)
                      +..|.+.+==..||-.+ .... .++-+|-...+.-+..   .....+......-..++|++++.+||. ++.+..+.++
T Consensus         6 ~~~V~~~d~D~~g~~~~-~~y~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~y~~~~~~gd~-i~v~t~v~~~   82 (128)
T 2egj_A            6 RRRVQFYETDAQGIVHH-SNYF-RYFEEARGEFLRSKGFPYSKMRDMGLEVVLLNAYCEYKKPLFYDDV-FEVHLNLEEL   82 (128)
T ss_dssp             EEECCGGGBCTTSSBCT-HHHH-HHHHHHHHHHHHHTTCCHHHHHHTTEEEEEEEEEEEECSCCCTTCE-EEEEEEEEEE
T ss_pred             EEEECHHHCCCCCEECH-HHHH-HHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEEEEEECCCCCCCCC-EEEEEEEEEE
T ss_conf             99989899588876668-9999-9999998866653372113366469629999976487342557982-6999999996


Q ss_pred             ECCCCEEEEEEEEEEECCEEEEEEEEEEEEEECC
Q ss_conf             3078579999999999999999997106998617
Q gi|254780460|r  135 LRGRVVLGAADGWVKVNGKEIYQANDLRVCLTID  168 (172)
Q Consensus       135 ~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~d  168 (172)
                         +.........++.+|+++++++-..+-+-+.
T Consensus        83 ---~~~~~~~~~~i~~~g~~~~~~~~~~v~~d~~  113 (128)
T 2egj_A           83 ---SRFTFTFSYIVFKEDIAVAKANTKHCMVKNG  113 (128)
T ss_dssp             ---CSSEEEEEEEEEETTEEEEEEEEEEEEEETT
T ss_pred             ---CCEEEEEEEEEEECCEEEEEEEEEEEEECCC
T ss_conf             ---9989999999999999999999999998899


No 61 
>>3d6l_A Putative hydrolase; hot DOG fold, thioesterase, acyl-COA; 2.59A {Campylobacter jejuni} (A:1-120)
Probab=85.52  E-value=2.6  Score=21.77  Aligned_cols=100  Identities=9%  Similarity=-0.103  Sum_probs=60.8

Q ss_pred             EEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEE
Q ss_conf             78875078655300455689952112757888799886401233468826676304511410233798579999998896
Q gi|254780460|r   55 VRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKI  134 (172)
Q Consensus        55 i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v  134 (172)
                      ++....+.++  +.    -...++-|-.+...+-.+++..+ ..............+++|++++.+|+. ++.+.++.  
T Consensus         7 ~~~~~~v~~~--~~----n~~g~vhGG~i~~l~D~~~~~a~-~~~~~~~~~~t~~~~i~f~~p~~~g~~-i~~~a~v~--   76 (120)
T 3d6l_A            7 PKLKIVAMPS--DT----NPAGNIFGGWILSQIDLAGAIAA-RELSPERVVTISMDKVVFKEPVFIGDI-ISCYSKVV--   76 (120)
T ss_dssp             CSEEEECCGG--GB----CTTSSBCHHHHHHHHHHHHHHHH-HTSSSSEEEEEEEEEEECCSCCCTTCE-EEEEEEEE--
T ss_pred             CEEEEECCHH--HC----CCCCEEEHHHHHHHHHHHHHHHH-HHHCCCCCCEEEEEEEEEEECCCCCCE-EEEEEEEE--
T ss_conf             1899980766--76----88975968999999999851556-865589861899836898612466638-99999999--


Q ss_pred             ECCCCEEEEEEEEEEECC---------EEEEEEEEEEEEE
Q ss_conf             307857999999999999---------9999997106998
Q gi|254780460|r  135 LRGRVVLGAADGWVKVNG---------KEIYQANDLRVCL  165 (172)
Q Consensus       135 ~~~~~~~~~~~g~~~vdg---------~~i~~a~~l~vgl  165 (172)
                       +.++..++.+++++.++         .+++++.-..+.+
T Consensus        77 -~~gr~~~~v~~~v~~~d~~~~~~~~~~~v~~a~~t~v~~  115 (120)
T 3d6l_A           77 -NVGNTSISVEVEVTAQRVDSQGCTSCINVTSALVTYVSV  115 (120)
T ss_dssp             -EECSSEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEE
T ss_pred             -EECCCEEEEEEEEEEEECCCCCCCEEEEEEEEEEEEEEE
T ss_conf             -944734999999999722568861799999999999998


No 62 
>>2cye_A Conserved hypothetical protein, TTHA1846; structural genomics, esterase, NPPSFA; HET: COA; 1.90A {Thermus thermophilus} (A:)
Probab=85.07  E-value=2.7  Score=21.65  Aligned_cols=105  Identities=13%  Similarity=-0.082  Sum_probs=59.2

Q ss_pred             EEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEE
Q ss_conf             88750786553004556899521127578887998864012334688266763045114102337985799999988963
Q gi|254780460|r   56 RAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKIL  135 (172)
Q Consensus        56 ~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~  135 (172)
                      +.+..|.+.+==+.||-.+ +. --.++-+|-.+.+.-+ ......+......-.+++|++++.+||. ++.+..+.++ 
T Consensus         7 ~~~~~V~~~d~D~~g~v~~-~~-y~~~~~~a~~~~~~~~-g~~~~~~~~~v~~~~~~~f~~~~~~gd~-i~v~~~v~~~-   81 (133)
T 2cye_A            7 RVRVDVRFRDLDPLGHVNN-AV-FLSYXELARIRYFQRI-SPDWLEEGHFVVARXEVDYLRPILLGDE-VFVGVRTVGL-   81 (133)
T ss_dssp             EEEEECCGGGBCTTSBBCH-HH-HHHHHHHHHHHHHTTC---CGGGGGGEEEEEEEEEECSCCBTTCE-EEEEEEEEEE-
T ss_pred             EEEEEECHHHCCCCCEECH-HH-HHHHHHHHHHHHHHHC-CCCCCCCCCEEEEEEEEEECCCCCCCCE-EEEEEEEEEE-
T ss_conf             9998707778786780114-89-8899887788777653-9750037747889999794727745610-1799999993-


Q ss_pred             CCCCEEEEEEEEEEECCEEEEEEEEEEEEEEC
Q ss_conf             07857999999999999999999710699861
Q gi|254780460|r  136 RGRVVLGAADGWVKVNGKEIYQANDLRVCLTI  167 (172)
Q Consensus       136 ~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~  167 (172)
                        +.........++.+|+++++++-..+-+-+
T Consensus        82 --~~~~~~~~~~i~~~g~~~a~~~~~~v~~d~  111 (133)
T 2cye_A           82 --GRSSLRXEHLVTANGESAAKGLGVLVWLEG  111 (133)
T ss_dssp             --CSSEEEEEEEEEETTEEEEEEEEEEEEEET
T ss_pred             --CCEEEEEEEEEEECCEEEEEEEEEEEEECC
T ss_conf             --998999999999899999999999999729


No 63 
>>1s5u_A Protein YBGC; structural genomics, hypothetical protein, thioesterase fold, PSI, protein structure initiative; 1.70A {Escherichia coli} (A:1-125)
Probab=84.55  E-value=2.9  Score=21.50  Aligned_cols=109  Identities=10%  Similarity=-0.061  Sum_probs=60.5

Q ss_pred             EEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH---CCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEE
Q ss_conf             7887507865530045568995211275788879988640---1233468826676304511410233798579999998
Q gi|254780460|r   55 VRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFF---LGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDF  131 (172)
Q Consensus        55 i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~---~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~i  131 (172)
                      .+.+..|.+.|==..||-.+ ....- ++-||-...+.-+   .......+......-..++|++++.+||. ++.+..+
T Consensus         8 ~~~~~~v~~~d~D~~g~v~~-~~y~~-~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~f~~~~~~gd~-i~v~~~~   84 (125)
T 1s5u_A            8 FRWPVRVYYEDTDAGGVVYH-ASYVA-FYERARTEMLRHHHFSQQALMAERVAFVVRKMTVEYYAPARLDDM-LEIQTEI   84 (125)
T ss_dssp             EEEEEECCGGGBCTTSSBCH-HHHHH-HHHHHHHHHHHHTTCCHHHHHHTTCEEEEEEEEEEECSCCCTTCE-EEEEEEE
T ss_pred             EEEEEEECHHHCCCCCCCCH-HHHHH-HHHHHEECHHHCCCCHHHHHHHCCCEEEEEEEEEEEEHHHCCCCE-EEEEEEE
T ss_conf             89889989999389985378-99988-888657001120464044575478059998640012033126842-7889999


Q ss_pred             EEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEEECCC
Q ss_conf             8963078579999999999-9999999971069986176
Q gi|254780460|r  132 KKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCLTIDR  169 (172)
Q Consensus       132 k~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl~~de  169 (172)
                      .++   +.........++. +|+++++++-..+.+-.+.
T Consensus        85 ~~~---~~~~~~~~~~i~~~~g~~~a~~~~~~v~~d~~~  120 (125)
T 1s5u_A           85 TSM---RGTSLVFTQRIVNAENTLLNEAEVLVVCVDPLK  120 (125)
T ss_dssp             EEE---CSSEEEEEEEEECTTCCEEEEEEEEEEEEETTT
T ss_pred             EEC---CCEEEEEEEEEEECCCEEEEEEEEEEEEEECCC
T ss_conf             875---975999999999258379999999999999999


No 64 
>>2qq2_A Cytosolic acyl coenzyme A thioester hydrolase; ACOT7, C-terminal domain, thioesterase, structural genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} (A:)
Probab=83.14  E-value=3.3  Score=21.15  Aligned_cols=92  Identities=10%  Similarity=0.040  Sum_probs=51.9

Q ss_pred             CCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEE
Q ss_conf             34235788750786553004556899521127578887998864012334688266763045114102337985799999
Q gi|254780460|r   50 YNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGI  129 (172)
Q Consensus        50 ~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i  129 (172)
                      ...|+++....+.++.  ..    ...++=|-.+...+-.+++ ++...............++.|+++|..|+ .++++.
T Consensus        38 ~~~~~~~~~~~v~~~~--~n----~~G~v~GG~l~~l~D~~~~-~a~~~~~~~~~~~t~~~~i~f~~pv~~g~-~i~~~a  109 (193)
T 2qq2_A           38 VSYSQSSLIHLVGPSD--CT----LHGFVHGGVTMKLMDEVAG-IVAARHCKTNIVTASVDAINFHDKIRKGC-VITISG  109 (193)
T ss_dssp             HHHHCEEEEEECCGGG--BC----SSSBBCHHHHHHHHHHHHH-HHHHHHHSSEEEEEEEEEEEECSCCBTTE-EEEEEE
T ss_pred             CCCCCEEEEEEECCCC--CC----CCCCCHHHHHHHHHHHHHH-HHHHHHHCCCCEEEEEEEEEEEECCCCCC-EEEEEE
T ss_conf             6615056467887010--49----8984908999999999999-99999859996279970599974135672-699999


Q ss_pred             EEEEEECCCCEEEEEEEEEEECC
Q ss_conf             98896307857999999999999
Q gi|254780460|r  130 DFKKILRGRVVLGAADGWVKVNG  152 (172)
Q Consensus       130 ~ik~v~~~~~~~~~~~g~~~vdg  152 (172)
                      ++.++   ++..++.++.++..+
T Consensus       110 ~v~~~---gr~~~~~~~~v~~~~  129 (193)
T 2qq2_A          110 RMTFT---SNKSMEIEVLVDADP  129 (193)
T ss_dssp             EEEEE---CSSEEEEEEEEEEEE
T ss_pred             EEEEC---CCCCEEEEEEEEEEC
T ss_conf             99861---775447888999960


No 65 
>>3bjk_A Acyl-COA thioester hydrolase HI0827; hotdog fold, trimer of dimers, YCIA, structural genomics, structure 2 function project, S2F; HET: CIT; 1.90A {Haemophilus influenzae rd KW20} PDB: 1yli_A* (A:)
Probab=82.74  E-value=3.4  Score=21.06  Aligned_cols=105  Identities=15%  Similarity=-0.065  Sum_probs=60.8

Q ss_pred             CCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEE
Q ss_conf             34235788750786553004556899521127578887998864012334688266763045114102337985799999
Q gi|254780460|r   50 YNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGI  129 (172)
Q Consensus        50 ~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i  129 (172)
                      .+.++++.+..+.+++==-      ..++=|..++.-+-.+ ...+................+.|++++.+||. ++.+.
T Consensus        11 ~~~~~~~~~~~v~~~~~d~------~G~v~gg~~~~~~d~~-~~~~~~~~~~~~~~~~~~~~i~f~~pv~~gd~-v~~~~   82 (153)
T 3bjk_A           11 QSKGVLLLRTLAMPSDTNA------NGDIFGGWIMSQMAMG-GAILAKEIAHGRVVTVAVESMNFIKPISVGDV-VCCYG   82 (153)
T ss_dssp             -CCSEEEEEEECCGGGBCT------TSSBCHHHHHHHHHHH-HHHHHHHHHTSCEEEEEEEEEEECSCCCTTCE-EEEEE
T ss_pred             CCCCEEEEEEEECCCCCCC------CCCCHHHHHHHHHHHH-HHHHHHHHCCCCCCEEEEEEEEEEECCCCCEE-EEEEE
T ss_conf             9976899999816523587------8818089999999999-99999997299973799736899511466539-99999


Q ss_pred             EEEEEECCCCEEEEEEEEEEEC---------CEEEEEEEEEEEEE
Q ss_conf             9889630785799999999999---------99999997106998
Q gi|254780460|r  130 DFKKILRGRVVLGAADGWVKVN---------GKEIYQANDLRVCL  165 (172)
Q Consensus       130 ~ik~v~~~~~~~~~~~g~~~vd---------g~~i~~a~~l~vgl  165 (172)
                      ++.++   ++..+..+.+++.+         +.++++++-..+.+
T Consensus        83 ~v~~~---g~~~~~~~~~i~~~~~~~~~~~~~~~v~~a~~~~v~~  124 (153)
T 3bjk_A           83 QCLKV---GRSSIKIKVEVWVKKVASEPIGERYCVTDAVFTFVAV  124 (153)
T ss_dssp             EEEEE---CSSEEEEEEEEEEECSSSSSTTCEEEEEEEEEEEEEB
T ss_pred             EEEEC---CCEEEEEEEEEEEECCCCCCCCEEEEEEEEEEEEEEE
T ss_conf             99881---4277999999999625667778599999999999998


No 66 
>>2w3x_A CALE7; hydrolase, hotdog fold, thioesterase, enediyne biosynthesis; HET: JEF; 1.75A {Micromonospora echinospora} (A:)
Probab=79.59  E-value=4.4  Score=20.39  Aligned_cols=108  Identities=3%  Similarity=-0.214  Sum_probs=60.1

Q ss_pred             EEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHH---HHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEE
Q ss_conf             7887507865530045568995211275788879988---6401233468826676304511410233798579999998
Q gi|254780460|r   55 VRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLT---GFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDF  131 (172)
Q Consensus        55 i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~---~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~i  131 (172)
                      .+.+..|.+.+==..||-.+ +...- .+-+|-.+.+   +.........+.........++|++++.+||. ++.+..+
T Consensus         7 ~~~~~~V~~~d~D~~g~v~~-~~y~~-~~~~~r~~~~~~~g~~~~~~~~~~~~~~v~~~~i~y~~~v~~gd~-i~v~~~v   83 (147)
T 2w3x_A            7 YEYRHVVGFEETNLVGNVYY-VNYLR-WQGRCREMFLYEHAPEILDELRADLKLFTLKAECEFFAELAPFDR-LAVRMRL   83 (147)
T ss_dssp             EEEEEECCGGGBCTTSSBCT-HHHHH-HHHHHHHHHHHHHCTHHHHHHTTTEEEEEEEEEEEECSCCCTTCE-EEEEEEE
T ss_pred             EEEEEEECHHHCCCCCCCCH-HHHHH-HHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHEEEEECCCCCCCCC-EEEEEEE
T ss_conf             79989978899489894458-99999-999999999876223378885268620543100112023457851-3899999


Q ss_pred             EEEECCCCEEEEEEEEEEE---CCEEEEEEEEEEEEEECC
Q ss_conf             8963078579999999999---999999997106998617
Q gi|254780460|r  132 KKILRGRVVLGAADGWVKV---NGKEIYQANDLRVCLTID  168 (172)
Q Consensus       132 k~v~~~~~~~~~~~g~~~v---dg~~i~~a~~l~vgl~~d  168 (172)
                      ..+.+.  .+ ...-.++.   +|+++++++-..+-+-.+
T Consensus        84 ~~~~~~--s~-~~~~~i~~~~~~g~~~a~~~~~~v~~d~~  120 (147)
T 2w3x_A           84 VELTQT--QM-ELGFDYLRLGGDDLLVARGRQRIACMRGP  120 (147)
T ss_dssp             EEECSS--EE-EEEEEEEEESSSEEEEEEEEEEEEEEESS
T ss_pred             EECCCC--EE-EEEEEEEECCCCCCEEEEEEEEEEEEECC
T ss_conf             981894--89-99999996289970899899999999888


No 67 
>>3dkz_A Thioesterase superfamily protein; Q7W9W5, borpa, PF03061, NESG, BPR208C, structural genomics, PSI-2, protein structure initiative; 2.40A {Bordetella parapertussis} (A:)
Probab=78.26  E-value=4.9  Score=20.15  Aligned_cols=115  Identities=11%  Similarity=0.044  Sum_probs=67.7

Q ss_pred             CCCCE-EE-EEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
Q ss_conf             86412-25-68999971844134235788750786553004556899521127578887998864012334688266763
Q gi|254780460|r   31 KPPML-MF-HRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVS  108 (172)
Q Consensus        31 ~~p~l-mi-DrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~  108 (172)
                      .+||. ++ =++.+++++       .++.+..+.++  ... |   ...+=|-.+. +++..++.++.............
T Consensus        12 ~~p~~~~~g~~~~~~~~~-------~~~~~~~~~~~--~~n-~---~g~vhGG~~~-~l~D~~~~~~~~~~~~~~~~~t~   77 (142)
T 3dkz_A           12 TIPFXQLLGVVPEHSGNG-------TARTRLPARAD--LVN-S---RGDIHGGTLX-SVLDFTLGAAIRGDTPEVGVATI   77 (142)
T ss_dssp             BCHHHHHHTCEEEEEETT-------EEEEEECCCST--TBC-S---SSSBCHHHHH-HHHHHHHHHTTTTSCTTSCEEEE
T ss_pred             CCCHHHHCCCEEEEEECC-------EEEEEEECCHH--HCC-C---CCCEECEEEE-EECCHHHHHHHHHCCCCCCCCCC
T ss_conf             679899759899999799-------99999997899--909-9---9958652444-32230245566640875553043


Q ss_pred             ECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEE
Q ss_conf             045114102337985799999988963078579999999999-999999997106998
Q gi|254780460|r  109 VSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCL  165 (172)
Q Consensus       109 ~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl  165 (172)
                      ..++.|.+++.-++ +  .+.++.   +.++..++++++++. ||+++++++-..+.+
T Consensus        78 ~l~i~f~~pv~~~~-~--~~a~v~---~~g~~~~~~~~~i~~~~g~~~a~~~~t~~~~  129 (142)
T 3dkz_A           78 DXNTSFXSPGRGDL-V--IETRCL---RRGASIAFCEGEIRDSAGELVAKATATFKII  129 (142)
T ss_dssp             EEEEEECSCCCSCE-E--EEEEEE---EECSSEEEEEEEEEETTCCEEEEEEEEEEEC
T ss_pred             EEEEEEECCCCCCE-E--EEEEEE---EECCCEEEEEEEEEECCCCEEEEEEEEEEEE
T ss_conf             30798724887879-9--999999---9698799999999989998999999999996


No 68 
>>3el6_A Erythromycin dehydratase; dehydratase double hotdog fold CIS-proline, acyltransferase, antibiotic biosynthesis; 1.85A {Saccharopolyspora erythraea} (A:)
Probab=76.27  E-value=5.6  Score=19.81  Aligned_cols=53  Identities=9%  Similarity=0.122  Sum_probs=31.1

Q ss_pred             CEEEEEEEEEECCCCCCCCEEEEEEEECCCC-CCCCCCC-CCCCCEEEHHHHHHHHHHHHH
Q ss_conf             1225689999718441342357887507865-5300455-689952112757888799886
Q gi|254780460|r   34 MLMFHRITQISETGGNYNQGVVRAEMDITPN-LWFFDCH-FKNDPVMPGCLGLDALWQLTG   92 (172)
Q Consensus        34 ~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d-~wff~gH-Fp~~PvmPGvL~iEa~~Ql~~   92 (172)
                      --++++...-.+..      .+..+..++.+ .+|..+| .-+.||+||+..+|.+++++.
T Consensus        37 ~~ll~~~~~~~~~~------~~~~~~~l~~~~~~~l~dH~v~g~~v~P~~~~ie~a~~a~~   91 (313)
T 3el6_A           37 HPLLLAAVDVPGHG------GAVFTGRLSTDEQPWLAEHVVGGRTLVPGSVLVDLALAAGE   91 (313)
T ss_dssp             STTEEEEEECTTTS------CEEEEEEECTTTCGGGGGEEETTEEBCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCC------CEEEEEEECCCCCCCCCCCEECCEEECCHHHHHHHHHHHHH
T ss_conf             98678704568999------46999997887686203567899982468999999999999


No 69 
>>2hx5_A Hypothetical protein; NP_895880.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.50A {Prochlorococcus marinus str} (A:)
Probab=76.26  E-value=5.6  Score=19.81  Aligned_cols=65  Identities=5%  Similarity=-0.064  Sum_probs=45.5

Q ss_pred             CCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEECCC
Q ss_conf             882667630451141023379857999999889630785799999999999999999971069986176
Q gi|254780460|r  101 LGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTIDR  169 (172)
Q Consensus       101 ~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~de  169 (172)
                      .+.+....-..+.|++++.++|. ++.+..+.++   +.......-.++.+|++++++....|.+-.+.
T Consensus        63 ~~~~~~v~~~~~~y~~~i~~~d~-i~v~t~v~~~---~~~s~~~~~~i~~~g~~~a~~~~~~v~~d~~~  127 (152)
T 2hx5_A           63 PEVALPIIHCQADFRRPIHTGDA-LAXELRPERL---NPNSFQVHFEFRCEEQIAAHALIRHLAINAQT  127 (152)
T ss_dssp             CSEECCEEEEEEEECSCCCTTCE-EEEEEEEEEE---ETTEEEEEEEEEETTEEEEEEEEEEECEETTT
T ss_pred             CCEEEEEEEEEEEECCCCCCCCE-EEEEEEEEEC---CCEEEEEEEEEEECCEEEEEEEEEEEEEECCC
T ss_conf             76368999999999045548850-5899999856---97099999999958957999999999998999


No 70 
>>2v1o_A Cytosolic acyl coenzyme A thioester hydrolase; alternative splicing, acyl-COA thioesterase 7, serine esterase, protein structure, domain duplication; HET: COA; 1.78A {Mus musculus} (A:)
Probab=76.23  E-value=5.6  Score=19.80  Aligned_cols=64  Identities=11%  Similarity=-0.063  Sum_probs=43.0

Q ss_pred             CCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE------CCEEEEEEEEEEEEEECCC
Q ss_conf             8266763045114102337985799999988963078579999999999------9999999971069986176
Q gi|254780460|r  102 GKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV------NGKEIYQANDLRVCLTIDR  169 (172)
Q Consensus       102 ~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v------dg~~i~~a~~l~vgl~~de  169 (172)
                      .........++.|++++..||. ++.+..|.++.   .........++.      +|++++++..-.|.+..|+
T Consensus        46 ~~~~~~~~~~i~f~~pv~~gd~-i~i~~~v~~~g---~~s~~~~~~i~~~~~~~~~~~~~~~a~~t~V~~~~~~  115 (151)
T 2v1o_A           46 CVAALARVERTDFLSPMCIGEV-AHVSAEITYTS---KHSVEVQVHVMSENILTGTKKLTNKATLWYVPLSLKN  115 (151)
T ss_dssp             EEEEEEEECCEECCSCCBTTCE-EEEEEEEEEEC---SSCEEEEEEEEEECTTTCCEEEEEEEEEEEEEEESSS
T ss_pred             CEEEEEEEEEEEEEECCCCCCE-EEEEEEEEECC---CCEEEEEEEEEEECCCCCCEEEEEEEEEEEEEEEECC
T ss_conf             2699999879999850364418-99999998548---6248999999996278996999999999999998479


No 71 
>>2gvh_A AGR_L_2016P; 15159470, acyl-COA hydrolase, structural genomics, joint center for structural genomics, JCSG; 2.50A {Agrobacterium tumefaciens str} (A:1-155)
Probab=75.56  E-value=5.8  Score=19.70  Aligned_cols=101  Identities=14%  Similarity=-0.045  Sum_probs=53.2

Q ss_pred             EEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEE
Q ss_conf             57887507865530045568995211275788879988640123346882667630451141023379857999999889
Q gi|254780460|r   54 VVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKK  133 (172)
Q Consensus        54 ~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~  133 (172)
                      .++.+..+.+.+--..||-.+      -.++. ++..++.++...............++.|++++..|+ .++++.++.+
T Consensus        28 ~~~~~~~v~~~~~n~~g~v~g------G~~~~-~~D~~~~~~~~~~~~~~~~~~~~~~i~f~~pv~~g~-~i~~~~~v~~   99 (155)
T 2gvh_A           28 TTRLIDIVFPGDTNHHGTLFG------GTGLA-LXDRVAFIAATRFGRTPFVTASCERIDFRQPARIGH-IVEFTARPVK   99 (155)
T ss_dssp             CEEEEEEECTTCHHHHHHHTT------HHHHH-HHHHHHHHHHHHHHCSCEEEEEECCEECCCCCSSCE-EEEEEEEEEE
T ss_pred             EEEEEEEECHHHCCCCCCCHH------HHHHH-HHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCC-EEEEEEEEEE
T ss_conf             269999988678698986949------99999-999999999998479965999984079867888996-7898899998


Q ss_pred             EECCCCEEEEEEEEEEEC------CEEEEEEEEEEEEE
Q ss_conf             630785799999999999------99999997106998
Q gi|254780460|r  134 ILRGRVVLGAADGWVKVN------GKEIYQANDLRVCL  165 (172)
Q Consensus       134 v~~~~~~~~~~~g~~~vd------g~~i~~a~~l~vgl  165 (172)
                      +   ++..+..++.++..      ++++++++-..+-+
T Consensus       100 ~---g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v~i  134 (155)
T 2gvh_A          100 A---GRRSLTVEVEXVAETIIGRQQHTCTRGIFHXVAI  134 (155)
T ss_dssp             E---CSSEEEEEEEEEEEETTTCCEEEEEEEEEEEEEC
T ss_pred             C---CCCEEEEEEEEEEEECCCCCEEEEEEEEEEEEEE
T ss_conf             2---8718999999999817899299999999999999


No 72 
>>2fuj_A Conserved hypothetical protein; structural genomics, X-RAY diffraction, hot DOG domain acyl-COA thioesterase, hydrolase; 1.70A {Xanthomonas campestris PV} (A:)
Probab=73.66  E-value=6.5  Score=19.41  Aligned_cols=108  Identities=9%  Similarity=-0.070  Sum_probs=63.0

Q ss_pred             EEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEE
Q ss_conf             78875078655300455689952112757888799886401233468826676304511410233798579999998896
Q gi|254780460|r   55 VRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKI  134 (172)
Q Consensus        55 i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v  134 (172)
                      .+.+..|.+.+==+.||-.+.-.  -...-+|-.+-+.-+.......+......-.++.|++++.+||. +..+..+.++
T Consensus        11 ~~~~~~v~~~d~D~~g~v~~~~y--~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~-i~v~~~~~~~   87 (137)
T 2fuj_A           11 ARVPISVRWRDMDSMGHVNNAKY--ISYLEEARVRWMLGVEGVAMTDRIAPVVAATNVNYKRPLVWPND-ILVELFVERL   87 (137)
T ss_dssp             EEEEECCCGGGBCTTSSBCHHHH--HHHHHHHHHHHHHHSSSCCCCCSSEEEEEEEEEEECSCCCTTCC-EEEEEEEEEE
T ss_pred             EEEEEEECHHHCCCCCCCCHHHH--HHHHHHHHHHHHHCCCCCHHHCCEEEEEEEEEEEECCCCCCCCC-EEEEEEEEEE
T ss_conf             89988946999188883077999--99998767877630154132255546999999888246668974-4899999992


Q ss_pred             ECCCCEEEEEEEEEEE---CCEEEEEEEEEEEEEECC
Q ss_conf             3078579999999999---999999997106998617
Q gi|254780460|r  135 LRGRVVLGAADGWVKV---NGKEIYQANDLRVCLTID  168 (172)
Q Consensus       135 ~~~~~~~~~~~g~~~v---dg~~i~~a~~l~vgl~~d  168 (172)
                         +.....+...++.   ||+++++++...|-+-.+
T Consensus        88 ---~~~s~~~~~~i~~~~~~g~~~a~~~~~~v~~~~~  121 (137)
T 2fuj_A           88 ---GSSSVTIGHRILDQKDEGVLYSDGNVVVVWIDTQ  121 (137)
T ss_dssp             ---CSSEEEEEEEEEESSCTTCEEEEEEEEEEEESSS
T ss_pred             ---CCCEEEEEEEEEECCCCCEEEEEEEEEEEEEECC
T ss_conf             ---8829999999999899989999999999999999


No 73 
>>2gvh_A AGR_L_2016P; 15159470, acyl-COA hydrolase, structural genomics, joint center for structural genomics, JCSG; 2.50A {Agrobacterium tumefaciens str} (A:156-288)
Probab=69.87  E-value=7.9  Score=18.89  Aligned_cols=102  Identities=11%  Similarity=-0.118  Sum_probs=58.7

Q ss_pred             EEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEE
Q ss_conf             35788750786553004556899521127578887998864012334688266763045114102337985799999988
Q gi|254780460|r   53 GVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFK  132 (172)
Q Consensus        53 G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik  132 (172)
                      |+++.+..+.++.=-      ..-.+=|-.+..-+-+++++. ...............++.|++++..|+. +..+.++.
T Consensus         3 g~~~~~~~~~~~~~n------~~G~~hGG~~~~l~D~a~~~a-a~~~~~~~~~~t~~~~i~f~~pv~~g~~-v~~~a~v~   74 (133)
T 2gvh_A            3 DAVTXVEIVFPDQAN------SAGRXFGGEAIAYXTKAAFVA-ASRYCGKLVVLASSERIDFARAIEIGEI-VEAQAHVE   74 (133)
T ss_dssp             -CEEEEEECCGGGBC------TTSBBCHHHHHHHHHHHHHHH-HHHHHSSEEEEEEECCEEBSSCCBTTEE-EEEEEEEE
T ss_pred             CCEEEEEEECHHHCC------CCCCCHHHHHHHHHHHHHHHH-HHHHCCCCCEEEEECCEEEECCEEECCE-EEEEEEEE
T ss_conf             661778898723557------788740999999999999999-9986599767999767897500212429-99999999


Q ss_pred             EEECCCCEEEEEEEEEEEC----CE--EEEEEEEEEEEE
Q ss_conf             9630785799999999999----99--999997106998
Q gi|254780460|r  133 KILRGRVVLGAADGWVKVN----GK--EIYQANDLRVCL  165 (172)
Q Consensus       133 ~v~~~~~~~~~~~g~~~vd----g~--~i~~a~~l~vgl  165 (172)
                         +.++...+.+++++..    ++  .++++.-..+.+
T Consensus        75 ---~~gr~~~~~~~~v~~~~~~~~~~~~v~~~~~~~v~~  110 (133)
T 2gvh_A           75 ---RVGRSSXSIQTKLWSENLLTGERHITATGHFTXVAV  110 (133)
T ss_dssp             ---EECSSEEEEEEEEEEEETTTCCEEEEEEEEEEEEEE
T ss_pred             ---EECCEEEEEEEEEEEEECCCCCEEEEEEEEEEEEEE
T ss_conf             ---848669999999999947899689999999999998


No 74 
>>2q78_A Uncharacterized protein; TM0581, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE MLC; 2.20A {Thermotoga maritima MSB8} (A:1-132)
Probab=67.91  E-value=8.7  Score=18.64  Aligned_cols=104  Identities=12%  Similarity=0.081  Sum_probs=59.3

Q ss_pred             EEEEEECCCCC-C-CCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEE
Q ss_conf             78875078655-3-004556899521127578887998864012334688266763045114102337985799999988
Q gi|254780460|r   55 VRAEMDITPNL-W-FFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFK  132 (172)
Q Consensus        55 i~aek~i~~d~-w-ff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik  132 (172)
                      ...+..|+++. | .+.+. .+-||+--.-++.-|-+++.-++...-..+..---.--+++...+..+|. +++++.+++
T Consensus        24 ~t~~~~V~~~~ta~~~~g~-g~~~VlaTp~mi~~mE~aa~~~l~~~L~~g~~sVG~~v~v~Hlaptp~G~-~V~v~a~l~  101 (132)
T 2q78_A           24 LTEDVALDETXVWNEDIEX-LDLHLVATSALIGVVHRVSYELLSRYLPNDYTAVVVETLARHVKAVPTGT-RVAVGVRVV  101 (132)
T ss_dssp             EEEEEEECGGGBCCSCGGG-GGGCBBCHHHHHHHHHHHHHHHHHTTSCTTEEEEEEEEEEEECSCCBSSE-EEEEEEEEE
T ss_pred             EEEEEEECCCCCCCCCCCC-CCCCEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCC-EEEEEEEEE
T ss_conf             8899996321145668552-25516725999999999999999965899974899999999941579998-999999999


Q ss_pred             EEECCCCEEEEEEEEEEECCEEEEEEEEEEE
Q ss_conf             9630785799999999999999999971069
Q gi|254780460|r  133 KILRGRVVLGAADGWVKVNGKEIYQANDLRV  163 (172)
Q Consensus       133 ~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~v  163 (172)
                      ++..++   +.|+.+++-++.+|.+++--.+
T Consensus       102 ~v~gr~---i~F~v~A~d~~~~Ig~G~H~R~  129 (132)
T 2q78_A          102 GVVGNR---VKFRGIVXSGDEKILEAEFVRA  129 (132)
T ss_dssp             EEETTE---EEEEEEEEETTEEEEEEEEEEE
T ss_pred             EEECCE---EEEEEEEEECCCCEEEEEEEEE
T ss_conf             996999---9999999999970999999999


No 75 
>>2q2b_A Cytosolic acyl coenzyme A thioester hydrolase; ACOT7, C-terminal domain; 2.50A {Mus musculus} (A:)
Probab=65.32  E-value=9.8  Score=18.34  Aligned_cols=92  Identities=10%  Similarity=0.041  Sum_probs=55.4

Q ss_pred             CCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEE
Q ss_conf             34235788750786553004556899521127578887998864012334688266763045114102337985799999
Q gi|254780460|r   50 YNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGI  129 (172)
Q Consensus        50 ~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i  129 (172)
                      ...|+++....+.+.  +-.    ...++-|..++..+-.+++..+. .............++.|++++..|+ .++++.
T Consensus        22 ~~~~~~~~~~~v~p~--~~n----~~G~vhGG~i~~l~D~~~~~~a~-~~~~~~~~~t~~~~i~fl~p~~~g~-~i~~~a   93 (179)
T 2q2b_A           22 VSYSQSSLIHLVGPS--DCT----LHGFVHGGVTMKLMDEVAGIVAA-RHCKTNIVTASVDAINFHDKIRKGC-VITISG   93 (179)
T ss_dssp             HHHHCEEEEEECC------------CCBCCHHHHHHHHHHHHHHHHH-HHHCSCCEEEEEEEEEECSCCBTTE-EEEEEE
T ss_pred             CCCCCEEEEEEECHH--HCC----CCCCCHHHHHHHHHHHHHHHHHH-HHHCCCCCEEEEEEEEEEEECCCEE-EEEEEE
T ss_conf             775603667898864--659----89849499999999999999999-9708997468987689963013215-799999


Q ss_pred             EEEEEECCCCEEEEEEEEEEECC
Q ss_conf             98896307857999999999999
Q gi|254780460|r  130 DFKKILRGRVVLGAADGWVKVNG  152 (172)
Q Consensus       130 ~ik~v~~~~~~~~~~~g~~~vdg  152 (172)
                      ++.++   ++...+.+++++.++
T Consensus        94 ~v~~~---g~~~~~v~~~v~~~~  113 (179)
T 2q2b_A           94 RMTFT---SNKSMEIEVLVDADP  113 (179)
T ss_dssp             EEEEE---ETTEEEEEEEEEEEE
T ss_pred             EEEEC---CCCCEEEEEEEEEEC
T ss_conf             99972---885237889999851


No 76 
>>3hdu_A Putative thioesterase; YP_461911.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.50A {Syntrophus aciditrophicus SB} (A:)
Probab=64.17  E-value=10  Score=18.21  Aligned_cols=53  Identities=4%  Similarity=-0.189  Sum_probs=37.3

Q ss_pred             EEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEE
Q ss_conf             66763045114102337985799999988963078579999999999-99999999710
Q gi|254780460|r  104 GRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDL  161 (172)
Q Consensus       104 ~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l  161 (172)
                      .....--++.|++++.+++  ++.+-   ++.+.++..++.+++++. ||+++++++.-
T Consensus       100 ~~~t~~l~v~~~~p~~~~~--v~~~a---~~~~~gr~~~~~~~~i~~~~g~lva~a~~t  153 (157)
T 3hdu_A          100 RLSTXSLHVEYLRPGLGRE--FVCTG---YNVRTGNKVAVIRTELXNDQDELIAVGSVS  153 (157)
T ss_dssp             GEEEEEEEEEESSCCCCSE--EEEEE---EEEEECSSEEEEEEEEEETTCCEEEEEEEE
T ss_pred             CEEEEEEEEEEECCCCCCE--EEEEE---EEEEECCCEEEEEEEEEECCCCEEEEEEEE
T ss_conf             2377999999851554433--68899---999918979999999996899899999999


No 77 
>>2o5u_A Thioesterase; putative thioesterese,, hydrolase; 1.91A {Pseudomonas aeruginosa} (A:)
Probab=61.41  E-value=12  Score=17.91  Aligned_cols=108  Identities=8%  Similarity=-0.178  Sum_probs=62.2

Q ss_pred             EEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHH-HHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEE
Q ss_conf             78875078655300455689952112757888799886-40123346882667630451141023379857999999889
Q gi|254780460|r   55 VRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTG-FFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKK  133 (172)
Q Consensus        55 i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~-~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~  133 (172)
                      ...+..|.+.+==+.||-.+.-.+  .++-+|..+.+. ..+......+......-..++|++++..||.+ +....+.+
T Consensus        15 ~~~~~~V~~~d~D~~g~v~~~~y~--~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~v-~v~~~~~~   91 (148)
T 2o5u_A           15 HFQPISTRWHDNDIYGHVNNVTYY--AFFDTAVNTYLIERGGLDIQGGEVIGLVVSSSCDYFAPVAFPQRI-EMGLRVAR   91 (148)
T ss_dssp             EEEEECCCGGGBCTTSSBCHHHHH--HHHHHHHHHHHHHHHCCCTTTCSEEEEEEEEEEEECSCCCTTSCE-EEEEEEEE
T ss_pred             EEEEEECCHHHCCCCCCCCHHHHH--HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCE-EEEEEECC
T ss_conf             799744298884867841549999--999999998764036531001575304446789993656789733-89999800


Q ss_pred             EECCCCEEEEEEEEEEE--CCEEEEEEEEEEEEEECC
Q ss_conf             63078579999999999--999999997106998617
Q gi|254780460|r  134 ILRGRVVLGAADGWVKV--NGKEIYQANDLRVCLTID  168 (172)
Q Consensus       134 v~~~~~~~~~~~g~~~v--dg~~i~~a~~l~vgl~~d  168 (172)
                      +   +.........++.  +|++++++....+.+-.+
T Consensus        92 ~---~~~~~~~~~~i~~~~~g~~~a~~~~~~v~~d~~  125 (148)
T 2o5u_A           92 L---GNSSVQYELALFLEGQREACAAGRFVHVFVERR  125 (148)
T ss_dssp             E---CSSEEEEEEEEEESSCCBCSEEEEEEEEEEETT
T ss_pred             C---CCCEEEEEEEEEECCCCEEEEEEEEEEEEEECC
T ss_conf             4---873599999998557874999999999999899


No 78 
>>1vpm_A Acyl-COA hydrolase; NP_241664.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: COA; 1.66A {Bacillus halodurans c-125} (A:)
Probab=57.77  E-value=13  Score=17.53  Aligned_cols=88  Identities=10%  Similarity=-0.044  Sum_probs=50.4

Q ss_pred             EEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEE
Q ss_conf             35788750786553004556899521127578887998864012334688266763045114102337985799999988
Q gi|254780460|r   53 GVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFK  132 (172)
Q Consensus        53 G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik  132 (172)
                      |+++.+..+.+.  +..    ...++=|-.+...+-.++++ +...............++.|++++..|+ .++++.++.
T Consensus        22 ~~~~~~~~v~~~--~~n----~~G~vhGG~l~~l~D~a~~~-~~~~~~~~~~~~t~~~~i~f~~pv~~g~-~i~~~a~v~   93 (169)
T 1vpm_A           22 SRTIQTRLVLPP--DTN----HLGTIFGGKVLAYIDEIAAL-TAXKHANSAVVTASIDSVDFKSSATVGD-ALELEGFVT   93 (169)
T ss_dssp             TCEEEEEECCGG--GBC----TTSBBCHHHHHHHHHHHHHH-HHHHHHTSEEEEEEECCCCCCSCCBTTE-EEEEEEEEE
T ss_pred             CEEEEEEEECHH--HCC----CCCCCHHHHHHHHHHHHHHH-HHHHHCCCCCEEEEEEEEEEEEECCCCC-EEEEEEEEE
T ss_conf             628999998844--578----78859389999999999999-9998538985289986789975016784-799999998


Q ss_pred             EEECCCCEEEEEEEEEEEC
Q ss_conf             9630785799999999999
Q gi|254780460|r  133 KILRGRVVLGAADGWVKVN  151 (172)
Q Consensus       133 ~v~~~~~~~~~~~g~~~vd  151 (172)
                      ++   ++...+.+++++..
T Consensus        94 ~~---g~~~~~~~~~v~~~  109 (169)
T 1vpm_A           94 HT---GRTSXEVYVRVHSN  109 (169)
T ss_dssp             EE---CSSEEEEEEEEEEE
T ss_pred             EE---CCEEEEEEEEEEEE
T ss_conf             61---45168776899982


No 79 
>>3ck1_A Putative thioesterase; YP_296387.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.74A {Ralstonia eutropha JMP134} (A:)
Probab=55.72  E-value=15  Score=17.32  Aligned_cols=108  Identities=9%  Similarity=-0.123  Sum_probs=60.2

Q ss_pred             EEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH-CCC----CCCCCCEEEEEECCCEEEEEECCCCCEEEEEE
Q ss_conf             7887507865530045568995211275788879988640-123----34688266763045114102337985799999
Q gi|254780460|r   55 VRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFF-LGW----LGELGKGRAVSVSNIKFRGMVTPDCKLVEYGI  129 (172)
Q Consensus        55 i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~-~~~----~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i  129 (172)
                      .+.+..|.+.|==+.|| .+......- +-+|-.+.+.-. ...    ....+.+....-..++|++++.+||. ++.+.
T Consensus         6 ~~~~~~V~~~d~D~~g~-v~~~~y~~~-~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~y~~~~~~gd~-i~v~t   82 (150)
T 3ck1_A            6 FRNTVLVRFKHCDAAGI-VFYPRYFEX-LNDFIEDWFAQALDWPFDAXHGAGQAGVPTADLHCRFVAPSRLGET-LTREL   82 (150)
T ss_dssp             EEEEEECCGGGBCTTSB-BCHHHHHHH-HHHHHHHHHHHTSSCCHHHHHTTTCEECCEEEEEEEECSCCBTTCE-EEEEE
T ss_pred             EEEEEEECHHHCCCCCC-CCHHHHHHH-HHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEEEEEEEHHHHHHCCC-CEEEE
T ss_conf             58988838788098773-527899999-9999998861033466888864489518999877441232001001-00488


Q ss_pred             EEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEEECC
Q ss_conf             988963078579999999999-999999997106998617
Q gi|254780460|r  130 DFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCLTID  168 (172)
Q Consensus       130 ~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl~~d  168 (172)
                      .+.++   ++......-.++. ||+++++++...+-+-.+
T Consensus        83 ~v~~~---~~~~~~~~~~i~~~dg~~~a~~~~~~v~vd~~  119 (150)
T 3ck1_A           83 RVVKL---GQSSFTVQVRFXGPDSGLRLEVTQRLVCVDTD  119 (150)
T ss_dssp             EEEEE---CSSEEEEEEEEECTTSCEEEEEEEEEECEEET
T ss_pred             EEEEC---CCCEEEEEEEEECCCCEEEEEEEEEEEEEECC
T ss_conf             99971---88189987453425765889999999999899


No 80 
>>3e1e_A Thioesterase family protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Silicibacter pomeroyi} (A:)
Probab=53.08  E-value=16  Score=17.07  Aligned_cols=109  Identities=11%  Similarity=0.026  Sum_probs=61.6

Q ss_pred             EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEE
Q ss_conf             89999718441342357887507865530045568995211275788879988640123346882667630451141023
Q gi|254780460|r   39 RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMV  118 (172)
Q Consensus        39 rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V  118 (172)
                      ++.++++       |+++....++++  +..    ....+-|-.+...+-.++++. .............++...|..++
T Consensus        27 ~~~~~~~-------~~~~~~~~~~~~--~~n----~~g~vhGG~l~~~~D~~~~~~-a~~~~~~~~~~~t~~~~~~~~~~   92 (141)
T 3e1e_A           27 RIDTLLP-------GRVELCMPYDRA--LTQ----QHGFLHAGIVSTVLDSACGYA-AFSLMEEEAAVLTVEFKVNFLNP   92 (141)
T ss_dssp             EEEEEET-------TEEEEEEECCGG--GBC----TTSSBCHHHHHHHHHHHHHHH-HHTTSCTTEEEEEEEEEEEECSC
T ss_pred             EEEEEEC-------CEEEEEEECCHH--HCC----CCCCEEHHHHHHHHHHHHHHH-HHHHCCCCCCEEEEEEEEEEECC
T ss_conf             9999959-------999999997989--949----999383888888877668888-88644643310214799998727


Q ss_pred             CCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE----CCEEEEEEEEEEEEE
Q ss_conf             37985799999988963078579999999999----999999997106998
Q gi|254780460|r  119 TPDCKLVEYGIDFKKILRGRVVLGAADGWVKV----NGKEIYQANDLRVCL  165 (172)
Q Consensus       119 ~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v----dg~~i~~a~~l~vgl  165 (172)
                      .+|+. ++.+.++.   +.++..++.++++++    +|+++++++-..+.+
T Consensus        93 ~~g~~-l~~~a~v~---~~~~~~~~~~~~v~~~~~~~g~~va~~~~t~~~~  139 (141)
T 3e1e_A           93 AEGER-FAFRAEVV---KPGRTLTVATATAYAFRDGEERAIATMTATLMAL  139 (141)
T ss_dssp             CCSSE-EEEEEEEE---ECCSSEEEEEEEEEEESSSCEEEEEEEEEEEEEE
T ss_pred             CCCCE-EEEEEEEE---ECCCCEEEEEEEEEEEECCCCCEEEEEEEEEEEE
T ss_conf             76647-99999999---9489699999999998689982999999999994


No 81 
>>2oaf_A Thioesterase superfamily; YP_508616.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: CIT PGE; 2.00A {Jannaschia SP} (A:)
Probab=51.53  E-value=17  Score=16.92  Aligned_cols=107  Identities=12%  Similarity=-0.056  Sum_probs=60.9

Q ss_pred             EEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHC------CCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEE
Q ss_conf             8875078655300455689952112757888799886401------2334688266763045114102337985799999
Q gi|254780460|r   56 RAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFL------GWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGI  129 (172)
Q Consensus        56 ~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~------~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i  129 (172)
                      +.+..|.+.+==+.||-.+.-. . ..+-+|-.....-+.      ......+......-..++|++++.+|+.+ +.+.
T Consensus        18 ~~~~~V~~~d~D~~g~v~~~~y-~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~~gd~i-~v~t   94 (151)
T 2oaf_A           18 VHDVRVTWGDCDPAKIAYTGHL-P-RFALEAIDAWWSEYHGPGGWYHLELDTNVGTPFVRLEXDFKSPVTPRHIL-KCHT   94 (151)
T ss_dssp             EEEECCCGGGBCTTSSBCGGGH-H-HHHHHHHHHHHHHHTCTTHHHHHHHTTCEECCEEEEEEEECSCCCTTSCE-EEEE
T ss_pred             EEEEEECHHHCCCCCEECHHHH-H-HHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEEEEEEEEEECCCEE-EEEE
T ss_conf             9999928899488772354999-9-99999877576543354303678986497639997841885200078444-4677


Q ss_pred             EEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEECC
Q ss_conf             988963078579999999999999999997106998617
Q gi|254780460|r  130 DFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTID  168 (172)
Q Consensus       130 ~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~d  168 (172)
                      .+.++   +.....++..++.+|+++++++...+-+-.+
T Consensus        95 ~i~~~---~~~~~~~~~~i~~~g~~~a~~~~~~v~~d~~  130 (151)
T 2oaf_A           95 WPTRL---GTKSITFRVDGVQDGVTCFVGAFTCVFTIAD  130 (151)
T ss_dssp             EEEEE---CSSEEEEEEEEEETTEEEEEEEEEEEEEEGG
T ss_pred             EEEEC---CCCEEEEEEEEEECCCEEEEEEEEEEEEECC
T ss_conf             77204---7625899999983331156888999999899


No 82 
>>3hm0_A Probable thioesterase; niaid, ssgcid, decode, UW, SBRI, infectious disease, rhizobiales, bacteremia, endocarditis, bacillary angiomatosis; 2.50A {Bartonella henselae} (A:)
Probab=48.85  E-value=19  Score=16.66  Aligned_cols=106  Identities=6%  Similarity=-0.177  Sum_probs=62.5

Q ss_pred             EEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCC-------CCCCCCCEEEEEECCCEEEEEECCCCCEEEEE
Q ss_conf             88750786553004556899521127578887998864012-------33468826676304511410233798579999
Q gi|254780460|r   56 RAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLG-------WLGELGKGRAVSVSNIKFRGMVTPDCKLVEYG  128 (172)
Q Consensus        56 ~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~-------~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~  128 (172)
                      .-...|.+.|==+.||-.+.-.+-  .+-||-...+.-+..       .....+.+....-.++.|++++.+||. ++.+
T Consensus        38 ~~~~~v~~~d~D~~g~v~~~~y~~--~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~i~y~~~i~~gd~-i~v~  114 (167)
T 3hm0_A           38 DFQARVYVADTDFSGVVYHARYLE--FFERGRSEFLRDTGFNNTLLASGVEGEKLFFVVRHMEINFSRPAQIDNL-LTIK  114 (167)
T ss_dssp             EEEEECCGGGBCTTSSBCTTHHHH--HHHHHHHHHHHTTSCCHHHHHHTTTSSCEEEEEEEEEEEECSCCCTTCE-EEEE
T ss_pred             EEEEEECHHHCCCCCEECHHHHHH--HHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCE-EEEE
T ss_conf             857997389958987675899999--9999999999983998889755552287699999873447256658835-6899


Q ss_pred             EEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEEC
Q ss_conf             998896307857999999999999999999710699861
Q gi|254780460|r  129 IDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTI  167 (172)
Q Consensus       129 i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~  167 (172)
                      ..+.++   +........+++.+|+++++++-..+.+-+
T Consensus       115 ~~~~~~---~~~~~~~~~~i~~~g~~~a~~~~~~v~id~  150 (167)
T 3hm0_A          115 TRISRL---QGARFFMEQYILHGESMLVTAKVEIALINE  150 (167)
T ss_dssp             EEEEEE---CSSEEEEEEEEEETTEEEEEEEEEEEEEET
T ss_pred             EEEEEC---CCEEEEEEEEEEECCEEEEEEEEEEEEECC
T ss_conf             999980---866999999999899999999999999989


No 83 
>>3b7k_A Acyl-coenzyme A thioesterase 12; hotdog fold, structural genomics, structural genomics consortium, SGC, cytoplasm, fatty acid metabolism, hydrolase; HET: COA; 2.70A {Homo sapiens} (A:)
Probab=47.40  E-value=20  Score=16.53  Aligned_cols=108  Identities=12%  Similarity=-0.064  Sum_probs=62.1

Q ss_pred             CCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
Q ss_conf             99864122568999971844134235788750786553004556899521127578887998864012334688266763
Q gi|254780460|r   29 LPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVS  108 (172)
Q Consensus        29 LP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~  108 (172)
                      +..+++.+.....-.....     |.++.+..+.+  |+..    ..-++-|-.+.-.+=.+++.. .............
T Consensus       179 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--~~~n----~~g~vhGG~l~~l~D~~~~~~-~~~~~~~~~~~t~  246 (333)
T 3b7k_A          179 SKFDDLIFDEEEGAVSTRG-----TSVQSIELVLP--PHAN----HHGNTFGGQIMAWMETVATIS-ASRLCWAHPFLKS  246 (333)
T ss_dssp             -----------------CC-----CCEEEEEECCG--GGBC----TTCBBCHHHHHHHHHHHHHHH-HHTSBSSCCEEEE
T ss_pred             HHHCCCCCCCCCCCCCCCC-----CEEEEEEEECC--HHHC----CCCCEEHHHHHHHHHHHHHHH-HHHHCCCCCEEEE
T ss_conf             1000000147777644456-----21799999764--2303----579809899999999999999-9997599846999


Q ss_pred             ECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECC
Q ss_conf             04511410233798579999998896307857999999999999
Q gi|254780460|r  109 VSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNG  152 (172)
Q Consensus       109 ~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg  152 (172)
                      ..++.|++++..|+ .++++.++.++   ++...+.+++++..+
T Consensus       247 ~l~i~f~~p~~~g~-~l~~~a~v~~~---g~~~~~~~~~v~~~~  286 (333)
T 3b7k_A          247 VDMFKFRGPSTVGD-RLVFTAIVNNT---FQTCVEVGVRVEAFD  286 (333)
T ss_dssp             ECCEECCSCCBTTC-EEEEEEEEEEE---ETTEEEEEEEEEEEC
T ss_pred             EEEEEEEEEEECCE-EEEEEEEEEEE---CCEEEEEEEEEEEEE
T ss_conf             51289973671470-99999999994---674999999999981


No 84 
>>2ali_A Hypothetical protein PA2801; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.75A {Pseudomonas aeruginosa} (A:)
Probab=44.17  E-value=22  Score=16.23  Aligned_cols=108  Identities=10%  Similarity=-0.131  Sum_probs=64.0

Q ss_pred             EEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEE
Q ss_conf             78875078655300455689952112757888799886401233468826676304511410233798579999998896
Q gi|254780460|r   55 VRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKI  134 (172)
Q Consensus        55 i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v  134 (172)
                      .+.+..|.+.+-=..||-.+ .... ...-+|-.+.+.-+.........+....-..++|++++.+||. +..+..+..+
T Consensus        30 ~~~~~~v~~~d~D~~g~v~~-~~y~-~~~~~ar~~~~~~~g~~~~~~~~~~v~~~~~~~f~~~~~~gd~-i~i~~~v~~~  106 (158)
T 2ali_A           30 HTAHIPVRWGDXDSYGHVNN-TLYF-QYLEEARVAWFETLGIDLEGAAEGPVVLQSLHTYLKPVVHPAT-VVVELYAGRL  106 (158)
T ss_dssp             EEEEEECCGGGBCTTSSBCT-THHH-HHHHHHHHHHHHHTTCCCSSCSEEEEEEEEEEEECSCCCSSCE-EEEEEEEEEE
T ss_pred             EEEEEEECHHHCCCCCCEEH-HHHH-HHHHHHHHHHHHHHCCCHHHCCCCCEEHHHHHHCCCCCCCCCC-EEEEEEEEEC
T ss_conf             89997836789687782440-9999-9999999999998544744515540000222210112148962-3899999967


Q ss_pred             ECCCCEEEEEEEEEEE---CCEEEEEEEEEEEEEECC
Q ss_conf             3078579999999999---999999997106998617
Q gi|254780460|r  135 LRGRVVLGAADGWVKV---NGKEIYQANDLRVCLTID  168 (172)
Q Consensus       135 ~~~~~~~~~~~g~~~v---dg~~i~~a~~l~vgl~~d  168 (172)
                         +.........++.   +|+++++++...|.+-.+
T Consensus       107 ---~~~s~~~~~~i~~~~~~g~~~a~~~~~~v~~d~~  140 (158)
T 2ali_A          107 ---GTSSLVLEHRLHTLEDPQGTYGEGHCKLVWVRHA  140 (158)
T ss_dssp             ---CSSEEEEEEEEEESSCTTSCCEEEEEEEEEEEGG
T ss_pred             ---CCCEEEEEEEEEECCCCCEEEEEEEEEEEEEECC
T ss_conf             ---9838999999999799988999999999999999


No 85 
>>2own_A Putative oleoyl-[acyl-carrier protein] thioesterase; NP_784467.1, oleoyl thioesterase (putative), structural genomics; 2.00A {Lactobacillus plantarum} (A:)
Probab=43.24  E-value=23  Score=16.14  Aligned_cols=52  Identities=8%  Similarity=-0.001  Sum_probs=31.3

Q ss_pred             CCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEE-ECCEEEEEEEEEEEEE
Q ss_conf             4511410233798579999998896307857999999999-9999999997106998
Q gi|254780460|r  110 SNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVK-VNGKEIYQANDLRVCL  165 (172)
Q Consensus       110 ~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~-vdg~~i~~a~~l~vgl  165 (172)
                      ..+.|++++.+||. ++....+.++  ++..+.+ .-.++ .||+++++++-..+.+
T Consensus       205 ~~i~y~~~~~~gd~-i~v~~~~~~~--~~~~~~~-~~~i~~~~g~~~a~~~~~~v~~  257 (262)
T 2own_A          205 VDVRYENEVKYGQT-VTAHANILPS--EVADQVT-TSHLIEVDDEKCCEVTIQWRTL  257 (262)
T ss_dssp             EEEEECSCCCTTCE-EEEEEEEECC--SSTTEEE-EEEEEEETTEEEEEEEEEEEEC
T ss_pred             EEEEEECCCCCCCE-EEEEEEEEEC--CCCCCEE-EEEEEECCCEEEEEEEEECCCC
T ss_conf             99999534689998-9999999524--7754159-9999979799999999992579


No 86 
>>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} (A:)
Probab=40.71  E-value=3.4  Score=21.12  Aligned_cols=12  Identities=17%  Similarity=0.523  Sum_probs=4.5

Q ss_pred             CCCCCCCCCCCC
Q ss_conf             553004556899
Q gi|254780460|r   64 NLWFFDCHFKND   75 (172)
Q Consensus        64 d~wff~gHFp~~   75 (172)
                      -.|.|-||+|+.
T Consensus       106 G~~~~HCHi~~H  117 (129)
T 2ccw_A          106 ENYAYFCSFPGH  117 (129)
T ss_dssp             CCEEEECCSTTG
T ss_pred             CEEEEEECCCCC
T ss_conf             619999699980


No 87 
>>2nuj_A Thioesterase superfamily; YP_509914.1, structural genomics, PSI-2, protein structure initiative, joint center for structural genomics, JCSG; 2.00A {Jannaschia} (A:)
Probab=40.11  E-value=26  Score=15.85  Aligned_cols=108  Identities=5%  Similarity=-0.181  Sum_probs=59.9

Q ss_pred             EEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHH-HCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEE
Q ss_conf             788750786553004556899521127578887998864-0123346882667630451141023379857999999889
Q gi|254780460|r   55 VRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGF-FLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKK  133 (172)
Q Consensus        55 i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~-~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~  133 (172)
                      .+.+..|.+.+-=+.||-.+.-.+  .++-+|..+.+.- ........+......-..++|++++..||. ++.+..+..
T Consensus        27 ~~~~~~v~~~d~D~~g~v~~~~yl--~~~~~a~~~~~~~~g~~~~~~~~~~~vv~~~~i~y~~~~~~gd~-i~v~~~~~~  103 (163)
T 2nuj_A           27 FGLADRVRFGELDAIGHVNHTAYL--RWYESFRLPFLKARHVTDYGPTSPRLVLKQVHCTYLAEXGXGED-YVITGRVSN  103 (163)
T ss_dssp             EEEEEECCGGGBCTTSSBCHHHHH--HHHHHHHHHHHHHTTSCCCSSSSCEEEEEEEEEEECSCCCTTCE-EEEEEEEEE
T ss_pred             CEEEEEEEEHHCCCCCCEEEHHHH--HHHHHHHHHHHHHHHCCCHHCCCCCCCCCEEEEEEEECCCEEEE-EEEEEEEEE
T ss_conf             077789841676777851208999--99999999999973312010015530022689998504410048-999998873


Q ss_pred             EECCCCEEEEEEEEEEE---CCEEEEEEEEEEEEEECC
Q ss_conf             63078579999999999---999999997106998617
Q gi|254780460|r  134 ILRGRVVLGAADGWVKV---NGKEIYQANDLRVCLTID  168 (172)
Q Consensus       134 v~~~~~~~~~~~g~~~v---dg~~i~~a~~l~vgl~~d  168 (172)
                      +..  . .......+++   +|+++++++...|-+-.+
T Consensus       104 ~~~--~-s~~~~~~~~~~~~~g~~~a~~~~~~v~id~~  138 (163)
T 2nuj_A          104 FRT--T-SFTXEFACWRLGDAVECTSEGSAVVVLLNRD  138 (163)
T ss_dssp             ECS--S-EEEEEEEEEECSSSCEEEEEEEEEEEEECTT
T ss_pred             CCC--C-EEEEEEEEEECCCCCCEEEEEEEEEEEEECC
T ss_conf             698--5-8999999996188731399999999999899


No 88 
>>1tbu_A Peroxisomal acyl-coenzyme A thioester hydrolase 1; yeast peroxisomal thioesterase, , domain swapping, iodine SOAK, siras; 2.20A {Saccharomyces cerevisiae} (A:)
Probab=37.16  E-value=29  Score=15.57  Aligned_cols=47  Identities=15%  Similarity=0.110  Sum_probs=33.7

Q ss_pred             ECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEE
Q ss_conf             045114102337985799999988963078579999999999999999997
Q gi|254780460|r  109 VSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQAN  159 (172)
Q Consensus       109 ~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~  159 (172)
                      .-.+-|-+++.|+.. ++|++  +.+ +.++.+......++-||++++++.
T Consensus        65 sl~~~fl~p~~~~~p-~~~~v--~~l-r~GRs~~~~~v~~~Q~g~~~~~a~  111 (118)
T 1tbu_A           65 SLHSYFIKGGDPRTK-ITYHV--QNL-RNGRNFIHKQVSAYQHDKLIFTSM  111 (118)
T ss_dssp             EEEEEECSCCCTTSC-CEEEE--EEE-EECSSEEEEEEEEEETTEEEEEEE
T ss_pred             EEEEEEECCCCCCCE-EEEEE--EEC-CCCCCEEEEEEEEEECCEEEEEEE
T ss_conf             788898348888843-99998--621-078668999999999999899999


No 89 
>>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A (A:417-489,A:790-965)
Probab=32.26  E-value=11  Score=18.05  Aligned_cols=68  Identities=13%  Similarity=0.144  Sum_probs=40.8

Q ss_pred             CCCCCCCCCCCC-CCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEE-CCCCCEEEEEEEEE
Q ss_conf             865530045568-995211275788879988640123346882667630451141023-37985799999988
Q gi|254780460|r   62 TPNLWFFDCHFK-NDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMV-TPDCKLVEYGIDFK  132 (172)
Q Consensus        62 ~~d~wff~gHFp-~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V-~Pgd~~i~~~i~ik  132 (172)
                      ..+.+|+.+|-. +.+++||+-.+|..+.++........   ...-..+.+++|.++. +|.++.+++.+.+.
T Consensus       155 ~~~~~~l~~H~I~G~~l~Patgylela~~a~~~~~~~~~---~~~~v~ledv~f~~pl~l~~~~~v~l~v~l~  224 (249)
T 3hhd_A          155 ESPDHYLVDHTLDGRVLFPATGYLSIVWKTLARALGLGV---EQLPVVFEDVVLHQATILPKTGTVSLEVRLL  224 (249)
T ss_dssp             -------------------------------------------------------------------------
T ss_pred             CCCCHHHCCCEECCEEEECCHHHHHHHHHHHHHHHCCCC---CCCCCEEEEEEECCCEEECCCCCEEEEEEEE
T ss_conf             899634254979999864568999999999999846898---5068489982872675827998489999997


No 90 
>>1njk_A Hypothetical protein YBAW; structural genomics, thioesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Escherichia coli} (A:)
Probab=28.83  E-value=40  Score=14.74  Aligned_cols=109  Identities=13%  Similarity=0.104  Sum_probs=60.6

Q ss_pred             EEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHC--CCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEE
Q ss_conf             78875078655300455689952112757888799886401--2334688266763045114102337985799999988
Q gi|254780460|r   55 VRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFL--GWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFK  132 (172)
Q Consensus        55 i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~--~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik  132 (172)
                      .+.+..|.+.+==+.||-.+.-. . .++-+|-.+.+.-+.  .............-..++|++++.+|++ ++.+..+.
T Consensus        23 ~~~~~~v~~~d~D~~g~v~~~~~-~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~d~-i~v~~~~~   99 (156)
T 1njk_A           23 XQTQIKVRGYHLDVYQHVNNARY-L-EFLEEARWDGLENSDSFQWXTAHNIAFVVVNININYRRPAVLSDL-LTITSQLQ   99 (156)
T ss_dssp             EEEEEECCGGGBCTTSSBCHHHH-H-HHHHHHHHHHHHSCHHHHHHHHTTEEEEEEEEEEEECSCCCTTCE-EEEEEEEE
T ss_pred             EEEEEEECHHHCCCCCEECHHHH-H-HHHHHHHHHHHHHCCCHHHHHHCCCEEEEEEEEEEEECCCCCCCE-EEEEEEEE
T ss_conf             68998988999788882557999-9-999999999998738788998579279999999998113557973-79999999


Q ss_pred             EEECCCCEEEEEEEEEEE--CCEEEEEEEEEEEEEECCC
Q ss_conf             963078579999999999--9999999971069986176
Q gi|254780460|r  133 KILRGRVVLGAADGWVKV--NGKEIYQANDLRVCLTIDR  169 (172)
Q Consensus       133 ~v~~~~~~~~~~~g~~~v--dg~~i~~a~~l~vgl~~de  169 (172)
                      .+.+.   .......++.  +|+++++++...+-+-.+.
T Consensus       100 ~~~~~---s~~~~~~i~~~~~~~~~a~~~~~~v~~d~~~  135 (156)
T 1njk_A          100 QLNGK---SGILSQVITLEPEGQVVADALITFVCIDLKT  135 (156)
T ss_dssp             EEETT---EEEEEEEEEETTTTEEEEEEEEEEEEEETTT
T ss_pred             ECCCE---EEEEEEEEEECCCCEEEEEEEEEEEEEECCC
T ss_conf             83874---9999999999999959999999999999999


No 91 
>>2hlj_A Hypothetical protein; NP_742468.1, structural genomics, PSI- 2, protein structure initiative, joint center for structural genomics; HET: MSE; 2.00A {Pseudomonas putida KT2440} (A:)
Probab=27.64  E-value=42  Score=14.61  Aligned_cols=105  Identities=8%  Similarity=-0.024  Sum_probs=55.6

Q ss_pred             EEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHH---HHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEE
Q ss_conf             75078655300455689952112757888799886---401233468826676304511410233798579999998896
Q gi|254780460|r   58 EMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTG---FFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKI  134 (172)
Q Consensus        58 ek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~---~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v  134 (172)
                      +..|.+.|==..||-.+ .... .++-+|-.+.+.   .........+......-..+.|++++.+|+. ++.+..+.++
T Consensus         9 ~~~v~~~d~D~~g~v~~-~~y~-~~~~~ar~~~~~~~g~~~~~~~~~~~~~~v~~~~i~y~~~~~~~d~-i~v~~~~~~~   85 (157)
T 2hlj_A            9 RTTVQEDWVDYNGHLRD-AFYL-LIFSYATDALXDRIGLDADSRGQSGNSLFTLEAHINYLHEVKLGTE-VWVQTQILGF   85 (157)
T ss_dssp             EEECCGGGBCTTSBBCH-HHHH-HHHHHHHHHHHHHHTTTTTSTTTTTTTEEEEEEEEEECSCCBTTCE-EEEEEEEEEE
T ss_pred             EEEECHHHCCCCCCCHH-HHHH-HHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEEEEEECCCCCCCCC-CEEEEEEECC
T ss_conf             78978788045677268-9999-9999999988755136623444211000101244542123330313-3899865126


Q ss_pred             ECCCCEEEEEEEEEEEC--CEEEEEEEEEEEEEECC
Q ss_conf             30785799999999999--99999997106998617
Q gi|254780460|r  135 LRGRVVLGAADGWVKVN--GKEIYQANDLRVCLTID  168 (172)
Q Consensus       135 ~~~~~~~~~~~g~~~vd--g~~i~~a~~l~vgl~~d  168 (172)
                         +........+++..  |++++++....+.+-.+
T Consensus        86 ---~~~s~~~~~~i~~~~~~~~~a~~~~~~v~~d~~  118 (157)
T 2hlj_A           86 ---DRKRLHVYHSLHRAGFDEVLAASEQXLLHVDLA  118 (157)
T ss_dssp             ---CSSEEEEEEEEEETTEEEEEEEEEEEEEEBCC-
T ss_pred             ---CCCCEEEEEEEECCCCHHEEEEEEEEEEEEECC
T ss_conf             ---874035555420244102001347999999789


No 92 
>>3bbj_A Putative thioesterase II; YP_290423.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.16A {Thermobifida fusca YX} (A:)
Probab=27.34  E-value=42  Score=14.58  Aligned_cols=44  Identities=11%  Similarity=0.161  Sum_probs=25.9

Q ss_pred             CCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEE
Q ss_conf             5114102337985799999988963078579999999999999999997
Q gi|254780460|r  111 NIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQAN  159 (172)
Q Consensus       111 ~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~  159 (172)
                      .+.|-+++.++.  +  +++++.+.. ++.+.....+++-+|++++++.
T Consensus        62 ~~~Fl~p~~~~p--i--~~~V~~lr~-GR~~s~~~v~~~Q~g~~~~~a~  105 (272)
T 3bbj_A           62 SYHFHRPASSGP--A--EIETRVLKR-GRTVTTVQTTLFQEGRTILTGT  105 (272)
T ss_dssp             EEEECSCCCSEE--E--EEEEEEEEC-CSSCEEEEEEEEETTEEEEEEE
T ss_pred             EEEECCCCCCCC--E--EEEEEEEEC-CCCEEEEEEEEEECCCEEEEEE
T ss_conf             866336788987--8--999999868-9978999999997896099999


No 93 
>>3cjy_A Putative thioesterase; YP_496845.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.70A {Novosphingobium aromaticivorans DSM12444} (A:)
Probab=26.88  E-value=43  Score=14.53  Aligned_cols=53  Identities=9%  Similarity=0.207  Sum_probs=34.3

Q ss_pred             CCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEEC
Q ss_conf             4511410233798579999998896307857999999999999999999710699861
Q gi|254780460|r  110 SNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTI  167 (172)
Q Consensus       110 ~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~  167 (172)
                      -.+.|-+.+.|+.. ++  +++..+.. ++.+....++++-+|++++++. ++.+..+
T Consensus        59 ~~~~Fl~~~~~~~p-~~--~~v~~lr~-Gr~~~~~~v~~~Q~g~~~~~a~-~~f~~~~  111 (259)
T 3cjy_A           59 GSLQFVSFTPLGSV-LD--LTVEVLQS-GRTLAQARVAGTVDGRLVFHSG-ISLGXRE  111 (259)
T ss_dssp             EEEEECSCCBTTCE-EE--EEEEEEEE-CSSCEEEEEEEEETTEEEEEEE-EEECCCT
T ss_pred             EEEEECCCCCCCCC-EE--EEEEEEEC-CCCEEEEEEEEEECCCCEEEEE-EECCCCC
T ss_conf             89997166689999-99--99998658-9974899999993687348876-4112357


No 94 
>>2ess_A Acyl-ACP thioesterase; NP_810988.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides thetaiotaomicron vpi-5482} (A:)
Probab=23.82  E-value=49  Score=14.19  Aligned_cols=59  Identities=14%  Similarity=0.022  Sum_probs=25.8

Q ss_pred             EEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEE-ECCEEEEEEEEEEEEEE
Q ss_conf             6676304511410233798579999998896307857999999999-99999999971069986
Q gi|254780460|r  104 GRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVK-VNGKEIYQANDLRVCLT  166 (172)
Q Consensus       104 ~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~-vdg~~i~~a~~l~vgl~  166 (172)
                      .....-..++|++++.++++ ++.+..+..+   +......+-.+. .+|+++++++...+.+.
T Consensus        59 ~~vv~~~~i~~~~~~~~~d~-v~v~t~~~~~---~~~~~~~~~~i~~~~g~~~~~~~~~~v~vd  118 (248)
T 2ess_A           59 TWVLSRLAIELDEXPYQYEK-FSVQTWVENV---YRLFTDRNFAVIDKDGKKIGYARSVWAXIN  118 (248)
T ss_dssp             EEEEEEEEEEESCCCBTTCE-EEEEEEEEEE---CSSEEEEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred             HHEEEEEEEEECCCCCCCCE-EEEEEEEEEC---CCCEEEEEEEEECCCCCEEEEEEEEEEEEE
T ss_conf             31102113200047888988-9999999715---997799999999479839999999999997


No 95 
>>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} (A:1-136)
Probab=22.11  E-value=53  Score=13.98  Aligned_cols=29  Identities=10%  Similarity=0.221  Sum_probs=20.3

Q ss_pred             CEEEEEECCCCCEEEEEEEEEEEECCCCE
Q ss_conf             11410233798579999998896307857
Q gi|254780460|r  112 IKFRGMVTPDCKLVEYGIDFKKILRGRVV  140 (172)
Q Consensus       112 vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~  140 (172)
                      -...+.-.|.+.++.|+|++.++...+.+
T Consensus       107 ~g~~~~~ip~~s~l~f~iel~~i~~~~~~  135 (136)
T 1p5q_A          107 VGKEKFQIPPNAELKYELHLKSFEKAKES  135 (136)
T ss_dssp             TCBGGGTBCSSCCEEEEEEEEEEECCCCG
T ss_pred             CCCCCCCCCCCCEEEEEEEECCCCCCCCH
T ss_conf             36876689975405899864022233453


No 96 
>>2i3t_B Spindle assembly checkpoint component; WD40 protein, beta propeller, mitotic spindle checkpoint, cell cycle; 2.80A {Saccharomyces cerevisiae} (B:)
Probab=20.29  E-value=56  Score=13.84  Aligned_cols=15  Identities=20%  Similarity=0.472  Sum_probs=12.3

Q ss_pred             CCCCCHHHHHHHCCC
Q ss_conf             655898899984188
Q gi|254780460|r    5 KSSYTYEEILRCGEG   19 (172)
Q Consensus         5 ~~~f~~~~i~~~~~g   19 (172)
                      +..|+.|||+|.|.+
T Consensus        24 ~~Ef~~EEiLA~srn   38 (54)
T 2i3t_B           24 RLEFSLEEVLAISRN   38 (54)
T ss_dssp             -CBCCHHHHHHHTTT
T ss_pred             CHHHHHHHHHHHHHH
T ss_conf             124019999998750


Done!