Query gi|254780460|ref|YP_003064873.1| 3-hydroxydecanoyl-(acyl carrier protein) dehydratase [Candidatus Liberibacter asiaticus str. psy62] Match_columns 172 No_of_seqs 131 out of 1572 Neff 6.8 Searched_HMMs 23785 Date Mon May 30 11:55:53 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780460.hhm -d /home/congqian_1/database/pdb/pdb70.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 1mka_A Beta-hydroxydecanoyl th 100.0 0 0 375.0 21.9 169 2-170 1-169 (171) 2 2cf2_C Fatty acid synthase, DH 100.0 0 0 341.9 20.3 169 2-170 172-340 (342) 3 2cf2_C Fatty acid synthase, DH 100.0 0 0 328.9 19.7 169 2-170 1-169 (342) 4 1z6b_A Pffabz, fatty acid synt 100.0 7.8E-37 3.3E-41 237.9 17.7 147 1-167 4-154 (154) 5 2gll_A FABZ, (3R)-hydroxymyris 100.0 1.5E-35 6.1E-40 230.3 16.3 145 2-169 18-171 (171) 6 3d6x_A (3R)-hydroxymyristoyl-[ 100.0 2.6E-33 1.1E-37 216.9 16.7 135 8-165 2-143 (146) 7 1u1z_A (3R)-hydroxymyristoyl-[ 100.0 2.4E-33 1E-37 217.2 16.0 140 3-163 17-162 (168) 8 3esi_A Uncharacterized protein 99.9 1.7E-21 7.1E-26 146.8 12.4 118 33-164 3-120 (129) 9 2f41_A Transcription factor FA 98.7 9.1E-08 3.8E-12 65.2 10.5 108 34-159 5-112 (121) 10 1q6w_A Monoamine oxidase regul 97.9 9.2E-05 3.9E-09 47.3 10.0 106 63-170 51-160 (161) 11 1iq6_A (R)-hydratase, (R)-spec 97.4 0.00078 3.3E-08 41.8 8.4 93 62-161 37-130 (134) 12 2b3n_A Hypothetical protein AF 97.2 0.0016 6.9E-08 39.9 8.4 90 60-160 65-154 (159) 13 1ixl_A Hypothetical protein PH 97.2 0.011 4.6E-07 35.0 13.8 118 26-164 5-123 (131) 14 3exz_A MAOC-like dehydratase; 97.2 0.005 2.1E-07 37.0 10.3 101 64-169 41-146 (154) 15 2pim_A Phenylacetic acid degra 97.1 0.014 6E-07 34.3 12.5 117 28-160 15-133 (141) 16 2c2i_A RV0130; hotdog, hydrata 97.1 0.0028 1.2E-07 38.5 8.4 98 62-161 45-146 (151) 17 3ir3_A HTD2, 3-hydroxyacyl-thi 96.9 0.0056 2.4E-07 36.7 8.3 93 61-160 46-138 (148) 18 3f5o_A Thioesterase superfamil 96.8 0.026 1.1E-06 32.8 11.5 112 39-169 29-142 (148) 19 3f1t_A Uncharacterized protein 96.4 0.041 1.7E-06 31.6 10.1 114 39-167 26-141 (148) 20 2bi0_A Hypothetical protein RV 96.2 0.064 2.7E-06 30.4 12.1 101 61-168 50-159 (337) 21 1zki_A Hypothetical protein PA 96.1 0.072 3E-06 30.1 13.4 105 39-161 23-127 (133) 22 2qwz_A Phenylacetic acid degra 96.1 0.075 3.2E-06 30.0 10.0 128 5-160 21-151 (159) 23 2prx_A Thioesterase superfamil 95.8 0.039 1.6E-06 31.7 7.6 102 54-165 39-151 (160) 24 2h4u_A Thioesterase superfamil 95.7 0.1 4.3E-06 29.2 12.8 104 39-160 34-139 (145) 25 3hrq_A PKS, aflatoxin biosynth 95.5 0.13 5.5E-06 28.6 13.6 118 31-164 199-320 (357) 26 1vh9_A P15, hypothetical prote 95.5 0.13 5.5E-06 28.6 13.7 135 5-170 6-142 (149) 27 3kuv_A Fluoroacetyl coenzyme A 95.2 0.15 6.5E-06 28.2 10.4 103 56-163 12-121 (139) 28 2f3x_A Transcription factor FA 95.2 0.16 6.8E-06 28.0 15.4 118 29-169 38-155 (157) 29 1wlu_A PAAI protein, phenylace 94.8 0.2 8.6E-06 27.4 13.6 102 39-161 12-113 (136) 30 1o0i_A Hypothetical protein HI 94.5 0.25 1E-05 26.9 10.7 126 5-160 4-131 (138) 31 1vh5_A Hypothetical protein YD 94.3 0.26 1.1E-05 26.8 11.8 132 5-167 6-139 (148) 32 2hbo_A Hypothetical protein (N 93.6 0.37 1.6E-05 25.9 9.7 94 53-162 42-139 (158) 33 3lw3_A HP0420 homologue; hotdo 93.3 0.41 1.7E-05 25.6 12.5 108 36-165 26-133 (145) 34 3kg6_A CURF; polyketide syntha 92.6 0.52 2.2E-05 25.0 8.1 73 83-164 208-281 (285) 35 3nwz_A BH2602 protein; structu 92.0 0.62 2.6E-05 24.6 12.1 114 38-171 54-169 (176) 36 2cwz_A Thioesterase family pro 91.4 0.72 3E-05 24.2 11.3 104 55-163 10-116 (141) 37 3kh8_A MAOC-like dehydratase; 91.0 0.64 2.7E-05 24.5 6.5 45 108-158 275-319 (332) 38 3kg9_A CURK; polyketide syntha 88.3 1.3 5.4E-05 22.7 11.9 119 31-171 174-294 (296) 39 1pn2_A Peroxisomal hydratase-d 88.2 1.3 5.5E-05 22.6 7.6 53 109-169 225-277 (280) 40 2egj_A Hypothetical protein AQ 87.5 1.4 6E-05 22.4 9.6 101 59-165 7-110 (128) 41 3kg8_A CURJ; polyketide syntha 87.3 1.5 6.2E-05 22.3 13.0 123 31-170 179-304 (308) 42 2cye_A TTHA1846, putative thio 86.9 1.6 6.5E-05 22.2 8.7 91 68-165 19-109 (133) 43 3e8p_A Uncharacterized protein 85.9 1.7 7.3E-05 21.9 9.2 105 39-160 40-159 (164) 44 2oiw_A Putative 4-hydroxybenzo 85.7 1.8 7.5E-05 21.8 11.1 92 69-166 19-110 (136) 45 3dkz_A Thioesterase superfamil 85.5 1.8 7.8E-05 21.8 13.1 113 39-171 22-135 (142) 46 1z54_A Probable thioesterase; 85.1 1.9 8.1E-05 21.6 9.5 102 58-165 6-110 (132) 47 3kg7_A CURH; polyketide syntha 84.8 2 8.3E-05 21.6 10.1 119 31-165 165-285 (293) 48 1q4t_A Thioesterase; hot-DOG, 84.1 2.1 8.9E-05 21.4 11.6 108 39-165 37-146 (151) 49 3gek_A Putative thioesterase Y 83.8 2.2 9.2E-05 21.3 9.9 98 53-161 28-127 (146) 50 2fs2_A Phenylacetic acid degra 83.5 2.3 9.5E-05 21.2 12.6 102 39-160 26-128 (151) 51 3bnv_A CJ0977; virulence facto 82.5 2.5 0.0001 21.0 14.0 128 8-163 13-142 (152) 52 2ov9_A Hypothetical protein; r 82.2 2.5 0.00011 20.9 11.1 98 53-163 110-208 (216) 53 3el6_A Erythromycin dehydratas 82.0 2.6 0.00011 20.9 9.8 106 31-164 194-300 (313) 54 1t82_A Hypothetical acetyltran 81.0 2.8 0.00012 20.7 11.1 104 39-160 35-147 (155) 55 2oaf_A Thioesterase superfamil 80.6 2.9 0.00012 20.6 9.6 105 58-168 20-130 (151) 56 2hx5_A Hypothetical protein; N 78.5 3.4 0.00014 20.2 8.9 105 57-167 10-125 (152) 57 2gf6_A Conserved hypothetical 78.3 3.4 0.00014 20.2 11.4 62 103-168 56-117 (135) 58 1yoc_A Hypothetical protein PA 78.2 3.4 0.00014 20.1 11.7 110 38-165 34-144 (147) 59 3hdu_A Putative thioesterase; 77.3 3.7 0.00015 20.0 7.7 48 108-160 104-152 (157) 60 1sh8_A Hypothetical protein PA 76.7 3.8 0.00016 19.9 8.3 108 39-165 27-146 (154) 61 3khp_A MAOC family protein; de 74.4 4.4 0.00018 19.5 6.5 25 107-134 254-278 (311) 62 3bjk_A Acyl-COA thioester hydr 71.7 5.1 0.00021 19.1 10.0 92 49-151 10-101 (153) 63 2w3x_A CALE7; hydrolase, hotdo 68.2 6.1 0.00026 18.7 8.8 64 101-168 54-120 (147) 64 3e29_A Uncharacterized protein 67.2 6.3 0.00027 18.6 12.5 105 39-161 25-130 (144) 65 1s5u_A Protein YBGC; structura 64.3 7.2 0.0003 18.2 8.6 64 101-168 55-119 (138) 66 3e1e_A Thioesterase family pro 61.6 8.1 0.00034 17.9 14.4 104 39-161 27-135 (141) 67 1s9c_A Peroxisomal multifuncti 60.9 8.3 0.00035 17.9 6.0 91 61-166 197-289 (298) 68 2hlj_A Hypothetical protein; p 47.2 14 0.00059 16.5 9.1 102 58-165 9-115 (157) 69 2v1o_A Cytosolic acyl coenzyme 46.3 15 0.00061 16.4 11.2 84 58-151 3-91 (151) 70 1lo7_A 4-hydroxybenzoyl-COA th 45.8 15 0.00062 16.4 7.7 108 55-168 5-123 (141) 71 2fuj_A Conserved hypothetical 45.2 15 0.00064 16.3 11.6 84 82-169 36-122 (137) 72 2xem_A DYNE7, TEBC; biosynthet 43.7 16 0.00067 16.2 10.4 64 100-165 57-122 (150) 73 1y7u_A Acyl-COA hydrolase; str 42.2 17 0.00071 16.0 11.5 89 53-152 18-106 (174) 74 2o5u_A Thioesterase; putative 39.8 18 0.00077 15.8 9.8 95 69-169 29-126 (148) 75 2eis_A Hypothetical protein TT 39.1 19 0.00079 15.8 11.5 96 59-165 8-110 (133) 76 3ck1_A Putative thioesterase; 38.5 19 0.00081 15.7 7.1 59 104-166 58-117 (150) 77 3cjy_A Putative thioesterase; 29.9 27 0.0011 14.9 9.9 46 110-159 59-104 (259) 78 3d6l_A Putative hydrolase; hot 29.3 27 0.0012 14.8 11.8 71 75-150 21-91 (137) 79 2ali_A Hypothetical protein PA 26.5 31 0.0013 14.5 10.9 93 68-166 43-138 (158) 80 2qq2_A Cytosolic acyl coenzyme 25.4 32 0.0014 14.4 9.5 83 44-134 32-114 (193) 81 2q2b_A Cytosolic acyl coenzyme 25.3 32 0.0014 14.4 8.0 73 55-135 27-99 (179) 82 3hm0_A Probable thioesterase; 24.3 34 0.0014 14.2 14.0 102 58-165 40-148 (167) 83 2q78_A Uncharacterized protein 23.7 35 0.0015 14.2 12.0 86 76-165 46-131 (153) 84 2gvh_A AGR_L_2016P; 15159470, 22.3 37 0.0016 14.0 10.3 86 54-150 159-244 (288) No 1 >1mka_A Beta-hydroxydecanoyl thiol ester dehydrase; fatty acid biosynthesis; HET: DAC; 2.00A {Escherichia coli} SCOP: d.38.1.2 PDB: 1mkb_A Probab=100.00 E-value=0 Score=375.05 Aligned_cols=169 Identities=55% Similarity=1.069 Sum_probs=164.1 Q ss_pred CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHH Q ss_conf 88865589889998418835579988899864122568999971844134235788750786553004556899521127 Q gi|254780460|r 2 KNRKSSYTYEEILRCGEGEMFGEGNAQLPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGC 81 (172) Q Consensus 2 ~~~~~~f~~~~i~~~~~g~~fg~~~~rLP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGv 81 (172) +++|+|||+|||+|||+|++|||.++|||+|||||||||+++++++|.+++|+++|+|+|++|||||+||||++|||||| T Consensus 1 ~~~~~~~~~~~ll~~~~g~~fg~~~~rLP~~P~L~iDrV~~i~~~~~~~~~g~i~a~k~v~~de~ff~gHFp~~PvmPGv 80 (171) T 1mka_A 1 VDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMTETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGC 80 (171) T ss_dssp CCCCSCBCHHHHHHHHTTCSSCSSSCCCCCTTTCCCSEEEEEESSCTTTTSCEEEEEEECCTTSGGGGTTTTTSCCCCHH T ss_pred CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCHH T ss_conf 98667899999997469966789988799997282899799974788456655999994255677784068999688779 Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEE Q ss_conf 57888799886401233468826676304511410233798579999998896307857999999999999999999710 Q gi|254780460|r 82 LGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDL 161 (172) Q Consensus 82 L~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l 161 (172) |++|||+|++++++++.+.....++++++++|||++|+|||++++|+++++++.++++.+++++|+++|||++||+|+++ T Consensus 81 L~iEa~aQ~~~~~~~~~~~~~~~~~~~i~~~kfr~~V~Pgd~l~~~~v~i~~i~~~~~~~~~~~g~~~vdgk~v~~a~~~ 160 (171) T 1mka_A 81 LGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASDL 160 (171) T ss_dssp HHHHHHHHHHHHHHHHTTCCSEEEEEEESCEEECSCCCTTCCEEEEEEEEEEEEESSSEEEEEEEEEEETTEEEEEEEEE T ss_pred HHHHHHHHHHHHHHEECCCCCCEEEEECCCCEEECCCCCCCEEEEEEEEEEEEEECCCEEEEEEEEEEECCEEEEEEECC T ss_conf 99999999999985403789847887424015866407999899999999999735847999999999899999999477 Q ss_pred EEEEECCCC Q ss_conf 699861768 Q gi|254780460|r 162 RVCLTIDRG 170 (172) Q Consensus 162 ~vgl~~de~ 170 (172) +|+||+|++ T Consensus 161 ~v~~f~~~~ 169 (171) T 1mka_A 161 KVGLFQDTS 169 (171) T ss_dssp EEEEESCCT T ss_pred EEEEEECCC T ss_conf 999871777 No 2 >2cf2_C Fatty acid synthase, DH domain; transferase, fatty acid metabolism, fatty acid biosynthesis, multienzyme; 4.30A {Sus scrofa} SCOP: d.38.1.2 Probab=100.00 E-value=0 Score=341.86 Aligned_cols=169 Identities=55% Similarity=1.069 Sum_probs=160.7 Q ss_pred CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHH Q ss_conf 88865589889998418835579988899864122568999971844134235788750786553004556899521127 Q gi|254780460|r 2 KNRKSSYTYEEILRCGEGEMFGEGNAQLPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGC 81 (172) Q Consensus 2 ~~~~~~f~~~~i~~~~~g~~fg~~~~rLP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGv 81 (172) .+++.+|++++++++++|++|+...+|||++||||||||+++++++|++++|+++|+|+|++|||||+||||++|||||| T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Lp~~p~l~iDrv~~~~~~~g~~~~g~i~~~k~v~~~ewff~gHFp~~PvmPG~ 251 (342) T 2cf2_C 172 VDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMTETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGC 251 (342) T ss_pred CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCHH T ss_conf 45567878335313455433579988899976154457899955998213657999976688883687889999777649 Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEE Q ss_conf 57888799886401233468826676304511410233798579999998896307857999999999999999999710 Q gi|254780460|r 82 LGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDL 161 (172) Q Consensus 82 L~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l 161 (172) |++|||+|++++|+++.++....++.++++||||+||+|||++++|+++|+++..++.++++++|+++|||++||+|+++ T Consensus 252 L~~Ea~~Q~~~~~~~~~~~~~~~~~~~~~~~kfr~~V~Pgd~~l~~~~~i~~v~~~~~~~~~~~~~~~vdg~~i~~a~~i 331 (342) T 2cf2_C 252 LGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASDL 331 (342) T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCEEEEEEEEEEEEEECCCEEEEEEEEEEECCEEEEEEECE T ss_conf 99999999999986313678726886256666946873899789999999997507826999999999999999999860 Q ss_pred EEEEECCCC Q ss_conf 699861768 Q gi|254780460|r 162 RVCLTIDRG 170 (172) Q Consensus 162 ~vgl~~de~ 170 (172) ++++++|++ T Consensus 332 ~v~~~~~~~ 340 (342) T 2cf2_C 332 KVGLFQDTS 340 (342) T ss_pred EEEEEECCC T ss_conf 999980787 No 3 >2cf2_C Fatty acid synthase, DH domain; transferase, fatty acid metabolism, fatty acid biosynthesis, multienzyme; 4.30A {Sus scrofa} SCOP: d.38.1.2 Probab=100.00 E-value=0 Score=328.85 Aligned_cols=169 Identities=55% Similarity=1.069 Sum_probs=162.1 Q ss_pred CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHH Q ss_conf 88865589889998418835579988899864122568999971844134235788750786553004556899521127 Q gi|254780460|r 2 KNRKSSYTYEEILRCGEGEMFGEGNAQLPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGC 81 (172) Q Consensus 2 ~~~~~~f~~~~i~~~~~g~~fg~~~~rLP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGv 81 (172) +++|++||+|+|++||+|+.|||.++|||+||||||||||++++++|++++|+++|||+|++|+|||+||||++|+|||| T Consensus 1 ~~~~~~f~~~~ll~~a~G~~fg~~~~RLP~pP~l~VdRV~~id~~~g~~~~G~i~ae~dV~~d~Wyf~~hf~~~p~mPg~ 80 (342) T 2cf2_C 1 VDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMTETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGC 80 (342) T ss_pred CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCCC T ss_conf 98667999999997469970789988899998089898889806888424248999984798867442898899856713 Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEE Q ss_conf 57888799886401233468826676304511410233798579999998896307857999999999999999999710 Q gi|254780460|r 82 LGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDL 161 (172) Q Consensus 82 L~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l 161 (172) |++||++|++++++.+.+.+..++++.+++++||++|.|++++++|+++++++..++..+.+++|+++|||+++++++++ T Consensus 81 L~vEa~~Q~~~~l~~~~g~~~~~~~~~~~~v~frg~v~p~~~~L~~~v~i~~~~~~~~~~~~~dge~~v~G~~v~~~~~~ 160 (342) T 2cf2_C 81 LGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASDL 160 (342) T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCCCCEEEEEEEEEEEEEECCEEEEEEEEEEEECCEEEEEECCC T ss_conf 79999999877786530667714677613156726669998089999999999805707999959999899997886154 Q ss_pred EEEEECCCC Q ss_conf 699861768 Q gi|254780460|r 162 RVCLTIDRG 170 (172) Q Consensus 162 ~vgl~~de~ 170 (172) +++++.+.. T Consensus 161 ~a~~~~~~~ 169 (342) T 2cf2_C 161 KVGLFQDTS 169 (342) T ss_pred CEEECCCCC T ss_conf 334212333 No 4 >1z6b_A Pffabz, fatty acid synthesis protein; malaria, beta-hydroxyacyl-ACP dehydratase, fatty acid biosynthesis, SAD phasing, lyase; 2.09A {Plasmodium falciparum} SCOP: d.38.1.6 PDB: 1zhg_A 2oki_A 2okh_A Probab=100.00 E-value=7.8e-37 Score=237.90 Aligned_cols=147 Identities=22% Similarity=0.341 Sum_probs=127.7 Q ss_pred CCCCCCCCCHHHHHHHCCCCCCCCCCCCCC-CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEE Q ss_conf 988865589889998418835579988899-8641225689999718441342357887507865530045568995211 Q gi|254780460|r 1 MKNRKSSYTYEEILRCGEGEMFGEGNAQLP-KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMP 79 (172) Q Consensus 1 ~~~~~~~f~~~~i~~~~~g~~fg~~~~rLP-~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmP 79 (172) |.|..+++|.+||.++ || ++||||||||++++++. .++|+|+|++|+|||+||||++|+|| T Consensus 4 ~~~~~~~l~~~~I~~l------------lPhR~PfLlvDri~~~~~g~------~i~~~k~v~~~e~~f~ghfp~~PvmP 65 (154) T 1z6b_A 4 MPNYDTSIDIEDIKKI------------LPHRYPFLLVDKVIYMQPNK------TIIGLKQVSTNEPFFNGHFPQKQIMP 65 (154) T ss_dssp ----CCCBCHHHHHHH------------CCCCTTSCCCCEEEEEETTT------EEEEEEECCTTSGGGGTSCTTSCCCC T ss_pred CCCCCCCCCHHHHHHH------------CCCCCCEEEEEEEEEEECCC------EEEEEEECCCCCCEEECCCCCCCCCH T ss_conf 9999986599999976------------79988847999999998893------39999984777526513478988684 Q ss_pred HHHHHHHHHHHHHHHCCCCC---CCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEE Q ss_conf 27578887998864012334---688266763045114102337985799999988963078579999999999999999 Q gi|254780460|r 80 GCLGLDALWQLTGFFLGWLG---ELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIY 156 (172) Q Consensus 80 GvL~iEa~~Ql~~~~~~~~~---~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~ 156 (172) |+|++|||+|++++++.... ....+++.+++++||+++|.|||+ +++++++++... ...++.++|+++|||+++| T Consensus 66 gvl~iEamaQ~~~~l~~~~~~~~~~~~~~l~~v~~~kf~~~v~PGd~-L~i~~~i~~~~~-~~gi~~~~~~a~v~~~~v~ 143 (154) T 1z6b_A 66 GVLQIEALAQLAGILCLKSDDSQKNNLFLFAGVDGVRWKKPVLPGDT-LTMQANLISFKS-SLGIAKLSGVGYVNGKVVI 143 (154) T ss_dssp HHHHHHHHHHHHHHHHHHHC----CCCEEEEEEEEEEECSCCCTTCE-EEEEEEEEEEET-TTTEEEEEEEEEETTEEEE T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEECCCCCCCCE-EEEEEEEEEEEC-CCCEEEEEEEEEECCEEEE T ss_conf 79999999998503543156667993899982240599965589999-999999999706-6648999999999999999 Q ss_pred EEEEEEEEEEC Q ss_conf 99710699861 Q gi|254780460|r 157 QANDLRVCLTI 167 (172) Q Consensus 157 ~a~~l~vgl~~ 167 (172) ++.++.+.+.+ T Consensus 144 ~~~el~~~l~~ 154 (154) T 1z6b_A 144 NISEMTFALSK 154 (154) T ss_dssp EEEEEEEEEC- T ss_pred EEEEEEEEEEC T ss_conf 93636999959 No 5 >2gll_A FABZ, (3R)-hydroxymyristoyl-acyl carrier protein dehydratase; lyase; 2.20A {Helicobacter pylori} PDB: 2glm_A* 2glp_A* 2glv_A 3dp1_A* 3cf8_A* 3cf9_A* 3d04_A* 3doy_A* 3doz_A* 3dp0_A* 3b7j_A* 3dp2_A* 3dp3_A* 3ed0_A* Probab=100.00 E-value=1.5e-35 Score=230.35 Aligned_cols=145 Identities=30% Similarity=0.443 Sum_probs=120.6 Q ss_pred CCCCCCCCHHHHHHHCCCCCCCCCCCCCC-CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEH Q ss_conf 88865589889998418835579988899-86412256899997184413423578875078655300455689952112 Q gi|254780460|r 2 KNRKSSYTYEEILRCGEGEMFGEGNAQLP-KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPG 80 (172) Q Consensus 2 ~~~~~~f~~~~i~~~~~g~~fg~~~~rLP-~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPG 80 (172) .|-+++|+.|+|.++ || ++||||||||++++++. +++|+|+|+.|+|||+||||++|+||| T Consensus 18 ~~~~~~~~~e~I~~l------------lPHR~PfllVD~i~~~~~~~------~i~~~k~Vs~~e~ff~ghfp~~Pv~Pg 79 (171) T 2gll_A 18 QNLQSQFFIEHILQI------------LPHRYPMLLVDRITELQANQ------KIVAYKNITFNEDVFNGHFPNKPIFPG 79 (171) T ss_dssp --CCSCEEHHHHHHH------------CCCCTTSCCCCEEEEEETTT------EEEEEEECCSCSTHHHHSCTTSCCCCH T ss_pred HCCCCCCCHHHHHHH------------CCCCCCEEEEEEEEEECCCC------EEEEEEEECCCCCEECCCCCCCCCCCH T ss_conf 300367499999986------------89998859899999983898------799999846888445277899884728 Q ss_pred HHHHHHHHHHHHHHCCCC--------CCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECC Q ss_conf 757888799886401233--------468826676304511410233798579999998896307857999999999999 Q gi|254780460|r 81 CLGLDALWQLTGFFLGWL--------GELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNG 152 (172) Q Consensus 81 vL~iEa~~Ql~~~~~~~~--------~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg 152 (172) +|++|||||++++++... .....+++.++++++|+++|.|||+ +++++++.+ ....+++++|+++||| T Consensus 80 vlliEamAQt~~~l~~~~~~~~~~~~~~~~~~~l~~i~~~~f~~~V~PGd~-L~i~v~i~~---~~~~~~~~~~~~~v~g 155 (171) T 2gll_A 80 VLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDR-LEYHLEVLK---HKGMIWQVGGTAQVDG 155 (171) T ss_dssp HHHHHHHHHHHHHHHHHHHHCSCHHHHTTEEEEEEEEEEEEECSCCCTTCE-EEEEEEEEE---ESSSEEEEEEEEEETT T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCE-EEEEEEEEE---EECCEEEEEEEEEECC T ss_conf 999999999988886250156443345772489851215799477699999-999999999---7699999999999999 Q ss_pred EEEEEEEEEEEEEECCC Q ss_conf 99999971069986176 Q gi|254780460|r 153 KEIYQANDLRVCLTIDR 169 (172) Q Consensus 153 ~~i~~a~~l~vgl~~de 169 (172) ++|++++ +.+.+.+.| T Consensus 156 ~~va~a~-i~~~i~~~~ 171 (171) T 2gll_A 156 KVVAEAE-LKAMIAERE 171 (171) T ss_dssp EEEEEEE-EEEEEEECC T ss_pred EEEEEEE-EEEEEECCC T ss_conf 9999999-999997589 No 6 >3d6x_A (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; FABZ, hot DOG fold, cytoplasm, lipid A biosynthesis, lipid synthesis; HET: MSE; 2.59A {Campylobacter jejuni subsp} Probab=100.00 E-value=2.6e-33 Score=216.94 Aligned_cols=135 Identities=25% Similarity=0.334 Sum_probs=112.9 Q ss_pred CCHHHHHHHCCCCCCCCCCCCCC-CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHH Q ss_conf 89889998418835579988899-86412256899997184413423578875078655300455689952112757888 Q gi|254780460|r 8 YTYEEILRCGEGEMFGEGNAQLP-KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDA 86 (172) Q Consensus 8 f~~~~i~~~~~g~~fg~~~~rLP-~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa 86 (172) .|.+||.++ || |+||||||||++++++. +++|+|+|+.|+|||+||||++|+|||||++|| T Consensus 2 ~~~~~I~~l------------lPhr~PfllvD~i~~~~~~~------~i~~~k~v~~~~~ff~~hfp~~pv~Pgvl~iE~ 63 (146) T 3d6x_A 2 IDVMQIQEI------------LPHRYPFLLVDKITELKVKE------VVLGYKNISISDHVFMGHFPGHPIYPGVLILEG 63 (146) T ss_dssp BCHHHHHHH------------CCCCTTSCCCCEEEEEETTT------EEEEEEECCTTBTHHHHSCTTSCCCCHHHHHHH T ss_pred CCHHHHHHH------------CCCCCCEEEEEEEEEECCCC------EEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHH T ss_conf 897999986------------79999948899999981898------899999647886220687899998975489999 Q ss_pred HHHHHHHHCCCCCC------CCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEE Q ss_conf 79988640123346------882667630451141023379857999999889630785799999999999999999971 Q gi|254780460|r 87 LWQLTGFFLGWLGE------LGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQAND 160 (172) Q Consensus 87 ~~Ql~~~~~~~~~~------~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~ 160 (172) |+|+++++++.... ....++.+++++||+++|.|||+ +++++++.+ .+..++.++|+++|||+++++++ T Consensus 64 ~aQ~~~~l~~~~~~~~~~~~~~~~~l~~i~~~kf~~~v~PGd~-l~i~~~~~~---~~~~~~~~~~~~~v~~~~va~a~- 138 (146) T 3d6x_A 64 MAQTGGVLAFESMEDKVDPKSKVVYFTGIDGAKFRNPVRPGDR-LDYEMSVVK---NRGNMWIFKGQAFVDGNLVAEAE- 138 (146) T ss_dssp HHHHHHHHHHTC-------CCSCEEEEEEEEEEECSCCCTTCE-EEEEEEEEE---EETTEEEEEEEEEETTEEEEEEE- T ss_pred HHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEECCCCCCCEE-EEEEEEEEE---EECCEEEEEEEEEECCEEEEEEE- T ss_conf 9999999987403444477772699831536999455589819-999999998---21899999999999999999999- Q ss_pred EEEEE Q ss_conf 06998 Q gi|254780460|r 161 LRVCL 165 (172) Q Consensus 161 l~vgl 165 (172) +.+.+ T Consensus 139 l~~~~ 143 (146) T 3d6x_A 139 LKAMI 143 (146) T ss_dssp EEEEE T ss_pred EEEEE T ss_conf 99999 No 7 >1u1z_A (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; fatty acid biosynthesis, hot DOG fold, lyase; 2.50A {Pseudomonas aeruginosa} SCOP: d.38.1.6 Probab=100.00 E-value=2.4e-33 Score=217.20 Aligned_cols=140 Identities=24% Similarity=0.351 Sum_probs=115.2 Q ss_pred CCCCCCCHHHHHHHCCCCCCCCCCCCCC-CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHH Q ss_conf 8865589889998418835579988899-864122568999971844134235788750786553004556899521127 Q gi|254780460|r 3 NRKSSYTYEEILRCGEGEMFGEGNAQLP-KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGC 81 (172) Q Consensus 3 ~~~~~f~~~~i~~~~~g~~fg~~~~rLP-~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGv 81 (172) +..+-+|.+||.++ || |+||||||||++++..+. .++|+|+|+.|+|||+||||++|+|||| T Consensus 17 ~~~~~ld~~~I~~l------------iPhR~PfLmVD~I~~i~~~~~-----~i~g~k~v~~~e~ff~ghfp~~pv~Pgv 79 (168) T 1u1z_A 17 RGSHMMDINEIREY------------LPHRYPFLLVDRVVELDIEGK-----RIRAYKNVSINEPFFNGHFPEHPIMPGV 79 (168) T ss_dssp ----CBCHHHHTTT------------CCCCTTSCCCCEEEEEETTTT-----EEEEEEECCTTSTTGGGSCTTSCCCCHH T ss_pred CCCCCCCHHHHHHH------------CCCCCCEEEEEEEEEEECCCC-----EEEEEEEECCCCHHHHHCCCCCCCCCHH T ss_conf 98766099999986------------899998598999999814997-----8999998077714532147885636744 Q ss_pred HHHHHHHHHHHHHCCCC---C--CCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEE Q ss_conf 57888799886401233---4--688266763045114102337985799999988963078579999999999999999 Q gi|254780460|r 82 LGLDALWQLTGFFLGWL---G--ELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIY 156 (172) Q Consensus 82 L~iEa~~Ql~~~~~~~~---~--~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~ 156 (172) |++|+|||++++++.+. . +...+++.+++++||+++|.|||+ +++++++.+. +..++.++|+++|||++++ T Consensus 80 lliE~mAQ~~~~l~~~~~~~~~~~~~~~~l~~i~~vkf~~~V~PGd~-L~i~~~i~~~---~~~~~~~~g~~~V~~~~va 155 (168) T 1u1z_A 80 LIIEAMAQAAGILGFKMLDVKPADGTLYYFVGSDKLRFRQPVLPGDQ-LQLHAKFISV---KRSIWKFDCHATVDDKPVC 155 (168) T ss_dssp HHHHHHHHHHHHHHHHHHTCCC---CEEEEEEEEEEEECSCCCTTCE-EEEEEEEEEE---ETTEEEEEEEEEETTEEEE T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEECCCCCCCCE-EEEEEEEEEE---ECCEEEEEEEEEECCEEEE T ss_conf 99999999998887640467778984899974227998875599999-9999999997---5999999999999999999 Q ss_pred EEEEEEE Q ss_conf 9971069 Q gi|254780460|r 157 QANDLRV 163 (172) Q Consensus 157 ~a~~l~v 163 (172) +++-+++ T Consensus 156 ~ael~~a 162 (168) T 1u1z_A 156 SAEIICA 162 (168) T ss_dssp EEEEEEE T ss_pred EEEEEEE T ss_conf 9999999 No 8 >3esi_A Uncharacterized protein; protein from erwinia carotovora subsp. atroseptica (pectobacterium atrosepticum), structural genomics; 2.50A {Pectobacterium atrosepticum} Probab=99.87 E-value=1.7e-21 Score=146.77 Aligned_cols=118 Identities=18% Similarity=0.338 Sum_probs=85.7 Q ss_pred CCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC Q ss_conf 41225689999718441342357887507865530045568995211275788879988640123346882667630451 Q gi|254780460|r 33 PMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNI 112 (172) Q Consensus 33 p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~v 112 (172) |++++|++++-..+. +.+++.+.|++|+|||+||||++||||||+++|+|+|++..++. ...++..++++ T Consensus 3 ~~~~~~~~~~~~~~~-----~~~~~~l~v~~d~~~f~gHFP~~PV~PGvl~iE~~~q~a~~~~~-----~~~~~~~i~~v 72 (129) T 3esi_A 3 PVELVRHDVKKTDET-----SQVELMLQVDPDLFWFNGHFTGQPLLPGVAQLDWVMHYATTVLA-----QGWTFLSIENI 72 (129) T ss_dssp CEEEEECCCCCCSSE-----EEEEEEEECCTTSGGGCTTTBSSCCCCHHHHHHHHHHHHHHHTC-----TTEEEEEEEEE T ss_pred CCCHHHCEEEECCCC-----CEEEEEEECCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHC-----CCCEECCCCCC T ss_conf 600201334303777-----56999998089987448789897828189999999999888748-----75011115632 Q ss_pred EEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEE Q ss_conf 1410233798579999998896307857999999999999999999710699 Q gi|254780460|r 113 KFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVC 164 (172) Q Consensus 113 kfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vg 164 (172) ||+++|.||++ ++++++ +...+..+.+.......||+.++..-.+... T Consensus 73 kF~~~V~Pgd~-l~i~~~---~~~~~~~l~f~~~~~~~dg~~~~asG~l~l~ 120 (129) T 3esi_A 73 KFQQPILPGKT-LRLVLI---WHAGKQSLTFSYSILEGDTERTASSGKIKLT 120 (129) T ss_dssp EECSCCCTTCE-EEEEEE---EETTTTEEEEEEEEEETTEEEEEEEEEEEEE T ss_pred EECCCCCCCCE-EEEEEE---EEECCCCEEEEEEEEECCCCEEEEEEEEEEE T ss_conf 89443099999-999999---9955870899999997249999999999951 No 9 >2f41_A Transcription factor FAPR; 'HOT-DOG' fold, gene regulation; 2.50A {Bacillus subtilis} SCOP: d.38.1.5 Probab=98.75 E-value=9.1e-08 Score=65.16 Aligned_cols=108 Identities=8% Similarity=-0.015 Sum_probs=77.8 Q ss_pred CEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCE Q ss_conf 12256899997184413423578875078655300455689952112757888799886401233468826676304511 Q gi|254780460|r 34 MLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIK 113 (172) Q Consensus 34 ~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vk 113 (172) --+|+++++++++. +.++.+++++|+|++++++.-.+++++.+-..+++ .. +.........+++ T Consensus 5 ~e~ig~ii~~~~g~------~a~~~~~v~~~~~~~~~g~~hGg~i~~lad~~~~~------a~----~~~~~vt~~~~i~ 68 (121) T 2f41_A 5 DEVIGEIIDLELDD------QAISILEIKQEHVFSRNQIARGHHLFAQANSLAVA------VI----DDELALTASADIR 68 (121) T ss_dssp -CCSSEEEEEETTT------EEEEEEECCGGGBCSTTCBBCHHHHHHHHHHHHHH------TC-------CCCEEEEEEE T ss_pred HHHCCEEEEEECCC------EEEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHH------HC----CCCCEEEEEEEEE T ss_conf 89509289997892------39999716889925799813755999999999998------64----9861999997889 Q ss_pred EEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEE Q ss_conf 4102337985799999988963078579999999999999999997 Q gi|254780460|r 114 FRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQAN 159 (172) Q Consensus 114 fr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~ 159 (172) |+++|.|||. ++.+.++.+..++ ..++.++.+..++++++++++ T Consensus 69 F~~pv~~Gd~-l~~~a~v~~~~~~-~~~~~v~v~~~~~~~~V~~G~ 112 (121) T 2f41_A 69 FTRQVKQGER-VVAKAKVTAVEKE-KGRTVVEVNSYVGEEIVFSGR 112 (121) T ss_dssp ECSCCBTTCE-EEEEEEEEEECSS-SSCEEEEEEEEETTEEEEEEE T ss_pred EEECCCCCCE-EEEEEEEEEECCE-EEEEEEEEEEEECCEEEEEEE T ss_conf 9665585999-9999999998780-899999999999999999999 No 10 >1q6w_A Monoamine oxidase regulatory protein, putative; structural genomics, nysgxrc T805, hot DOG fold; 2.81A {Archaeoglobus fulgidus dsm 4304} SCOP: d.38.1.4 Probab=97.93 E-value=9.2e-05 Score=47.32 Aligned_cols=106 Identities=10% Similarity=0.004 Sum_probs=70.1 Q ss_pred CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCC-CCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEE--CCCC Q ss_conf 6553004556899521127578887998864012-334688266763045114102337985799999988963--0785 Q gi|254780460|r 63 PNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLG-WLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKIL--RGRV 139 (172) Q Consensus 63 ~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~-~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~--~~~~ 139 (172) -|+=|.+..-.++++.||.+.+-.+.++..-++. ...........+.++++|+++|.||| +++.+.+|.+.. +.+. T Consensus 51 ~D~~~A~~~g~~~~ia~g~~~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~rf~~Pv~~GD-tl~~~~~V~~~~~~~~~~ 129 (161) T 1q6w_A 51 TDVEFAKKTIFGKPIAQGMLVLSIALGMVDQVILSNYDVSSVIAFFGIKDVRFLRPVFIGD-TIAASAEVVEKQDFDEKS 129 (161) T ss_dssp HCHHHHHTSTTSSCBCCHHHHHHHHHHHHHHHHHTTSBGGGEEEEEEEEEEEECSCCBTTC-EEEEEEEEEEEEEEETTE T ss_pred ECHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCC-EEEEEEEEEEEEECCCCC T ss_conf 8899982258998523628899999999998864103456517887765779878879989-999999999999807985 Q ss_pred EEEEEEEEEEE-CCEEEEEEEEEEEEEECCCC Q ss_conf 79999999999-99999999710699861768 Q gi|254780460|r 140 VLGAADGWVKV-NGKEIYQANDLRVCLTIDRG 170 (172) Q Consensus 140 ~~~~~~g~~~v-dg~~i~~a~~l~vgl~~de~ 170 (172) .++.++.++.. +|++|++++. .+.+.++++ T Consensus 130 g~v~~~~~~~nq~ge~V~~~~~-~~li~r~P~ 160 (161) T 1q6w_A 130 GVVTYKLEVKNQRGELVLTALY-SALIRKTPS 160 (161) T ss_dssp EEEEEEEEEECTTSCEEEEEEE-EEEEECCC- T ss_pred EEEEEEEEEEECCCCEEEEEEE-EEEEECCCC T ss_conf 8999999999799999999399-999977999 No 11 >1iq6_A (R)-hydratase, (R)-specific enoyl-COA hydratase; polyhydroxyalkanoate, aeromonas caviae, the hydratase 2 motif, lyase; 1.50A {Aeromonas punctata} SCOP: d.38.1.4 Probab=97.41 E-value=0.00078 Score=41.80 Aligned_cols=93 Identities=13% Similarity=0.075 Sum_probs=59.7 Q ss_pred CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEE Q ss_conf 86553004556899521127578887998864012334688266763045114102337985799999988963078579 Q gi|254780460|r 62 TPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVL 141 (172) Q Consensus 62 ~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~ 141 (172) +-|+.|.+..-.++++.||.+..-.+.+++.-.+ ..+. ....-.+++|+++|.||| +++.+.+|.++...+ .+ T Consensus 37 H~D~~~A~~~g~~~~i~~G~~~~~~~~~~~~~~~---~~~~--~~~~~~~~rf~~Pv~~GD-tl~~~~~v~~~~~~~-~~ 109 (134) T 1iq6_A 37 HLDPAFAATTAFERPIVHGMLLASLFSGLLGQQL---PGKG--SIYLGQSLSFKLPVFVGD-EVTAEVEVTALREDK-PI 109 (134) T ss_dssp HHCHHHHTTSTTCSCBCCHHHHHHHHHHHHHHTS---SCTT--CEEEEEEEEECSCCBTTC-EEEEEEEEEEECSSS-SE T ss_pred EECHHHHHHCCCCCCEECCHHHHHHHHCCCCCCC---CCCC--EEEEEHHEEECCCCCCCC-EEEEEEEEEEEECCC-CE T ss_conf 2479999656999836410787888861530005---8740--141220107878867899-999999999999689-99 Q ss_pred EEEEEEEEE-CCEEEEEEEEE Q ss_conf 999999999-99999999710 Q gi|254780460|r 142 GAADGWVKV-NGKEIYQANDL 161 (172) Q Consensus 142 ~~~~g~~~v-dg~~i~~a~~l 161 (172) +.++.++.. +|+++++++-. T Consensus 110 v~~~~~~~nq~g~~V~~g~a~ 130 (134) T 1iq6_A 110 ATLTTRIFTQGGALAVTGEAV 130 (134) T ss_dssp EEEEEEEECTTSCEEEEEEEE T ss_pred EEEEEEEEECCCCEEEEEEEE T ss_conf 999999998999899998999 No 12 >2b3n_A Hypothetical protein AF1124; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.25A {Archaeoglobus fulgidus} SCOP: d.38.1.4 PDB: 2b3m_A 3k67_A Probab=97.23 E-value=0.0016 Score=39.88 Aligned_cols=90 Identities=11% Similarity=-0.039 Sum_probs=59.4 Q ss_pred ECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCC Q ss_conf 07865530045568995211275788879988640123346882667630451141023379857999999889630785 Q gi|254780460|r 60 DITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRV 139 (172) Q Consensus 60 ~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~ 139 (172) .|+-|+-|.+..-.++|+.||.+..--+.+++.- . .+.. ...-.+++|+++|.||| +++.+.+|+++..+ T Consensus 65 PiH~D~~~Ak~~gf~~~iahG~l~~a~~~~~~~~----~--~g~~-~~~~~~~rF~~PV~~GD-tl~~~~~V~~~~~~-- 134 (159) T 2b3n_A 65 PVHFDEDFASKTRFGGRVVHGMLTTSLVSAAVAR----L--PGTV-VLLEQSFRYTSPVRIGD-VVRVEGVVSGVEKN-- 134 (159) T ss_dssp HHHHCHHHHHHSTTSSCCCCHHHHHHHHHHHHHT----S--SSCE-EEEEEEEEECSCCCTTC-EEEEEEEEEEEETT-- T ss_pred CCEECHHHHHHCCCCCEEEEHHHHHHHHHHHHEE----C--CCHH-HHHEEEEEEECCCCCCC-EEEEEEEEEEEECC-- T ss_conf 3500788996568887055206678899987600----6--6524-01110368827858999-99999999999899-- Q ss_pred EEEEEEEEEEECCEEEEEEEE Q ss_conf 799999999999999999971 Q gi|254780460|r 140 VLGAADGWVKVNGKEIYQAND 160 (172) Q Consensus 140 ~~~~~~g~~~vdg~~i~~a~~ 160 (172) ....+.++.++++++++.+- T Consensus 135 -~~~v~~~~~~~d~vv~~G~a 154 (159) T 2b3n_A 135 -RYTIDVKCYTGDKVVAEGVV 154 (159) T ss_dssp -EEEEEEEEEETTEEEEEEEE T ss_pred -EEEEEEEEEECCEEEEEEEE T ss_conf -89999999999999999999 No 13 >1ixl_A Hypothetical protein PH1136; alpha+beta, hot-DOG-fold, structural genomics, unknown function; 1.94A {Pyrococcus horikoshii} SCOP: d.38.1.5 Probab=97.21 E-value=0.011 Score=34.96 Aligned_cols=118 Identities=8% Similarity=0.011 Sum_probs=70.0 Q ss_pred CCCCC-CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCE Q ss_conf 88899-86412256899997184413423578875078655300455689952112757888799886401233468826 Q gi|254780460|r 26 NAQLP-KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKG 104 (172) Q Consensus 26 ~~rLP-~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~ 104 (172) ..|.+ ...-.++.+++++++ |+++.+..+++ ++.++ ...++-|-++.-.+-.++++.+ . ... T Consensus 5 ~~~~~~~~~~~l~g~~i~~~~-------g~a~~~~~~~~-~~~~n----~~G~vHGG~~~~l~D~~~~~a~-~----~~~ 67 (131) T 1ixl_A 5 EQRTHKLTSRILVGKPILIKE-------GYAEVELETID-EMKVD----EKGLVHGGFTFGLADYAAMLAV-N----EPT 67 (131) T ss_dssp CCCSCTTCCTTTTCEEEEEET-------TEEEEEEECCG-GGBSS----TTCBBCHHHHHHHHHHHHHHHH-C----CTT T ss_pred HHHHCCCCCHHCEEEEEEEEC-------CEEEEEEEECH-HHCCC----CCCCCCHHHHHHHHHHHHHHHC-C----CCC T ss_conf 785250001310049999989-------99999999878-99149----9997609998998888767542-6----870 Q ss_pred EEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEE Q ss_conf 676304511410233798579999998896307857999999999999999999710699 Q gi|254780460|r 105 RAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVC 164 (172) Q Consensus 105 ~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vg 164 (172) ....-.+++|++++..|+. ++.+.++ .+.++..++.++++++++++|++++-..+- T Consensus 68 ~vT~~l~i~fl~pv~~G~~-l~~~a~v---~~~g~~~~~~~~~i~~~~~~Va~g~~~~~v 123 (131) T 1ixl_A 68 VVLGKAEVRFTKPVKVGDK-LVAKAKI---IEDLGKKKIVEVKVYREEEVVLEGKFYCYV 123 (131) T ss_dssp EEEEEEEEEECSCCBTTCE-EEEEEEE---EEEETTEEEEEEEEEETTEEEEEEEEEEEE T ss_pred EEEEEEEEEEEEECCCCCE-EEEEEEE---EEECCCEEEEEEEEEECCEEEEEEEEEEEE T ss_conf 7999999999771489999-9999999---996994999999999999999999999999 No 14 >3exz_A MAOC-like dehydratase; Q2RSA1_rhort, NESG, RRR103A, structural genomics, PSI-2, protein structure initiative; 2.30A {Rhodospirillum rubrum atcc 11170} Probab=97.16 E-value=0.005 Score=37.02 Aligned_cols=101 Identities=8% Similarity=-0.049 Sum_probs=60.0 Q ss_pred CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEEC--C--CC Q ss_conf 5530045568995211275788879988640123346882667630451141023379857999999889630--7--85 Q gi|254780460|r 64 NLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILR--G--RV 139 (172) Q Consensus 64 d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~--~--~~ 139 (172) |+=|.+..-.+++|.||.+.+--+..++. ........+....-.+++|+++|.||| +++.+.+|..+.. . +. T Consensus 41 D~~~A~~~~~~~~ia~g~~~~a~~~~~~~---~~~~~~~~~~~~~~~~~~f~~PV~~GD-tl~~~~~V~~~~~~~s~~~~ 116 (154) T 3exz_A 41 DEEAARHSLFGGLAASGWHTAAITMRLLV---TSGLPLAQGIIGAGTELSWPNPTRPGD-ELHVETTVLAITPSKSRPDR 116 (154) T ss_dssp CHHHHHTSTTCSCCCCHHHHHHHHHHHHH---HTTSCBTTCCCEEEEEEECSSCCCTTC-EEEEEEEEEEEEECSSCTTE T ss_pred CHHHHHHCCCCCCCCCHHHHHHHHHHHHH---HCCCCCCCCEEECCCEEEECCCCCCCC-EEEEEEEEEEEEEECCCCCC T ss_conf 98898556889711273889999988866---304566520120130208978889999-98899999999960567984 Q ss_pred EEEEEEEEEEE-CCEEEEEEEEEEEEEECCC Q ss_conf 79999999999-9999999971069986176 Q gi|254780460|r 140 VLGAADGWVKV-NGKEIYQANDLRVCLTIDR 169 (172) Q Consensus 140 ~~~~~~g~~~v-dg~~i~~a~~l~vgl~~de 169 (172) .++.....+.. +|++|++.+. .+.+.+.+ T Consensus 117 giV~~~~~~~Nq~ge~V~~~~~-~~lv~rrP 146 (154) T 3exz_A 117 AIVTCQSDTLNQRGEVVQRSTA-KVVVFRRP 146 (154) T ss_dssp EEEEEEEEEECTTSCEEEEEEE-EEEEECCC T ss_pred EEEEEEEEEEECCCCEEEEEEE-EEEEECCC T ss_conf 7999999999799989999899-99998898 No 15 >2pim_A Phenylacetic acid degradation-related protein; thioesterase superfamily, phenylacetic acid degradation-RELA protein; 2.20A {Ralstonia eutropha JMP134} Probab=97.11 E-value=0.014 Score=34.30 Aligned_cols=117 Identities=15% Similarity=0.109 Sum_probs=67.1 Q ss_pred CCCCCCCE--EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEE Q ss_conf 89986412--2568999971844134235788750786553004556899521127578887998864012334688266 Q gi|254780460|r 28 QLPKPPML--MFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGR 105 (172) Q Consensus 28 rLP~~p~l--miDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~ 105 (172) ++|.||+. |=-++..++.+. |.++.+..++++ +.. ....+=|-.+.-.+=.++++.+.......... T Consensus 15 ~~~~pp~~~~lg~~~~~~~~~~-----g~~~~~~~~~~~--~~n----~~G~vhGG~iatl~D~a~~~a~~~~~~~~~~~ 83 (141) T 2pim_A 15 EAPVPAVAGTLGGVIRAVDLEA-----GSLESDYVATDA--FLN----PVGQVQGGMLGAMLDDVTAMLVTATLEDGASC 83 (141) T ss_dssp SSCCCHHHHHHTCEEEEEETTT-----TEEEEEEEECGG--GBC----TTSSBCHHHHHHHHHHHHHHHHHHTCCTTCCC T ss_pred CCCCCCHHHHHCCEEEEEECCC-----CEEEEEEECCHH--HCC----CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE T ss_conf 9999928998098789998119-----999999976999--929----99959489999999999999999756899435 Q ss_pred EEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEE Q ss_conf 7630451141023379857999999889630785799999999999999999971 Q gi|254780460|r 106 AVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQAND 160 (172) Q Consensus 106 ~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~ 160 (172) ...--+++|.+++.+| . ++.+.+ +.+.++.+++.+++++.||+++++++. T Consensus 84 ~Ti~l~i~fl~p~~~g-~-l~a~~~---v~~~Gr~~~~~~~~i~~~g~lvA~a~~ 133 (141) T 2pim_A 84 STLNLNLSFLRPAQAG-L-LRGRAR---LERRGRNVCNVVGELSQDGKLVATATA 133 (141) T ss_dssp EEEEEEEEECSCCCSE-E-EEEEEE---EEEECSSEEEEEEEEEETTEEEEEEEE T ss_pred EEEEEEEEEECCCCCC-E-EEEEEE---EEEECCCEEEEEEEEEECCEEEEEEEE T ss_conf 8544778997578898-8-999999---999389899999999989989999999 No 16 >2c2i_A RV0130; hotdog, hydratase, lyase, structural proteomics in europe, spine, structural genomics; 1.8A {Mycobacterium tuberculosis} SCOP: d.38.1.4 Probab=97.09 E-value=0.0028 Score=38.54 Aligned_cols=98 Identities=13% Similarity=0.070 Sum_probs=62.5 Q ss_pred CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEEC--CCC Q ss_conf 865530045568995211275788879988640123346882667630451141023379857999999889630--785 Q gi|254780460|r 62 TPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILR--GRV 139 (172) Q Consensus 62 ~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~--~~~ 139 (172) +-|+=|.+..-.+.++.||.+..--+.+++.-... ..........+.++++|+++|.||| +++.+.+|+++.. .+. T Consensus 45 H~D~e~A~~~~~~~~ia~g~~~~~l~~~~~~~~~~-~~~~~~~~~~g~~~~rf~~PV~~GD-tl~~~~~V~~~~~~~~g~ 122 (151) T 2c2i_A 45 HVDPERAAAGPFGTTIAHGFMTLALLPRLQHQMYT-VKGVKLAINYGLNKVRFPAPVPVGS-RVRATSSLVGVEDLGNGT 122 (151) T ss_dssp HHCHHHHHTSTTSSCBCCHHHHHHTHHHHHHTTCE-ESSCSCEEEEEEEEEECCSCCBTTC-EEEEEEEEEEEEEEETTE T ss_pred CCCHHHHHHCCCCCCEECCCEEEEEEHHHCCCCCC-CCCCCEEEECCCEEEEECCCCCCCC-EEEEEEEEEEEEECCCCC T ss_conf 75888984477897130350110100011131100-2465324512316999817768999-999999999999937993 Q ss_pred EEEEEEEEEEECC--EEEEEEEEE Q ss_conf 7999999999999--999999710 Q gi|254780460|r 140 VLGAADGWVKVNG--KEIYQANDL 161 (172) Q Consensus 140 ~~~~~~g~~~vdg--~~i~~a~~l 161 (172) ..++.+.++.++| ++++.++-+ T Consensus 123 ~~~~~~~~ve~~~~~~~v~~ae~l 146 (151) T 2c2i_A 123 VQATVSTTVEVEGSAKPACVAESI 146 (151) T ss_dssp EEEEEEEEEEETTCSSCSEEEEEE T ss_pred EEEEEEEEEEEECCCCEEEEEEEE T ss_conf 899999999998998319999993 No 17 >3ir3_A HTD2, 3-hydroxyacyl-thioester dehydratase 2; structural GENO structural genomics consortium, SGC, lyase; 1.99A {Homo sapiens} Probab=96.85 E-value=0.0056 Score=36.70 Aligned_cols=93 Identities=17% Similarity=0.074 Sum_probs=55.4 Q ss_pred CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCE Q ss_conf 78655300455689952112757888799886401233468826676304511410233798579999998896307857 Q gi|254780460|r 61 ITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVV 140 (172) Q Consensus 61 i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~ 140 (172) ++-|+=|.+.-=.+.++.||.+..=-+..+.. .+..+. +......+++|+++|.||| +++.+.+|+++.. ... T Consensus 46 iH~D~e~Ak~~g~~~~i~~G~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~f~~PV~~GD-tl~~~~~v~~~~~-~~~ 118 (148) T 3ir3_A 46 LHLNEDFAKHTKFGNTIVHGVLINGLISALLG---TKMPGP--GCVFLSQEISFPAPLYIGE-VVLASAEVKKLKR-FIA 118 (148) T ss_dssp GGGSSCC--------CBCCHHHHHHHHHHHHH---HTSSCT--TCEEEEEEEECCSCCBTTC-EEEEEEEEEEEET-TEE T ss_pred CEECHHHHHHCCCCCEECCCHHHHHHHHHHHH---HHCCCC--CEEEEEEEEEECCCCCCCC-EEEEEEEEEEEEC-CCC T ss_conf 40188898345899635362334789988876---436888--1897861103258878999-9999999999978-998 Q ss_pred EEEEEEEEEECCEEEEEEEE Q ss_conf 99999999999999999971 Q gi|254780460|r 141 LGAADGWVKVNGKEIYQAND 160 (172) Q Consensus 141 ~~~~~g~~~vdg~~i~~a~~ 160 (172) .+..+..+..+|+++++.+- T Consensus 119 ~v~~~~~~~~~g~~V~~g~a 138 (148) T 3ir3_A 119 IIAVSCSVIESKKTVMEGWV 138 (148) T ss_dssp EEEEEEEETTTCCEEEEEEE T ss_pred EEEEEEEEEECCEEEEEEEE T ss_conf 99999999969989999999 No 18 >3f5o_A Thioesterase superfamily member 2; hotdog fold, hydrolase; HET: UOC COA P6G; 1.70A {Homo sapiens} PDB: 2f0x_A* 2cy9_A Probab=96.82 E-value=0.026 Score=32.79 Aligned_cols=112 Identities=15% Similarity=0.056 Sum_probs=65.6 Q ss_pred EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEE Q ss_conf 89999718441342357887507865530045568995211275788879988640123346882667630451141023 Q gi|254780460|r 39 RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMV 118 (172) Q Consensus 39 rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V 118 (172) ++.++++ |+++.+..+.++.- . +..-+--|++. +++-.++.+..............--++.|.+++ T Consensus 29 ~~~~~~~-------G~~~~~~~v~~~~~--n---~~G~lHGG~l~--tl~D~~~~~a~~~~~~~~~~vT~~l~v~fl~p~ 94 (148) T 3f5o_A 29 TLVSAAP-------GKVICEMKVEEEHT--N---AIGTLHGGLTA--TLVDNISTMALLCTERGAPGVSVDMNITYMSPA 94 (148) T ss_dssp EEEEEET-------TEEEEEEECCGGGB--C---TTSBBCHHHHH--HHHHHHHHHHHHTSSSCCCCEEEEEEEEECSCC T ss_pred EEEEECC-------CEEEEEEECCHHHC--C---CCCCEEHHHHH--HHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCC T ss_conf 9999829-------99999999599990--9---99958578888--999999999999718998207666888997357 Q ss_pred CCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE--CCEEEEEEEEEEEEEECCC Q ss_conf 37985799999988963078579999999999--9999999971069986176 Q gi|254780460|r 119 TPDCKLVEYGIDFKKILRGRVVLGAADGWVKV--NGKEIYQANDLRVCLTIDR 169 (172) Q Consensus 119 ~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v--dg~~i~~a~~l~vgl~~de 169 (172) .+|+. +..+. ++.+.++.+++.+++++- +|++|++++- ...+|..| T Consensus 95 ~~G~~-l~~~a---~v~~~gr~~~~~~~~v~~~~~~~lvA~a~~-T~~i~~~~ 142 (148) T 3f5o_A 95 KLGED-IVITA---HVLKQGKTLAFTSVDLTNKATGKLIAQGRH-TKHLGNLE 142 (148) T ss_dssp BTTCE-EEEEE---EEEEECSSEEEEEEEEEETTTCCEEEEEEE-EEECC--- T ss_pred CCCCE-EEEEE---EEEEECCCEEEEEEEEEECCCCEEEEEEEE-EEEEECCC T ss_conf 89999-99999---999958989999999999999989999988-99984332 No 19 >3f1t_A Uncharacterized protein Q9I3C8_pseae; PAR319A, NESG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.20A {Pseudomonas aeruginosa} Probab=96.38 E-value=0.041 Score=31.58 Aligned_cols=114 Identities=10% Similarity=-0.023 Sum_probs=63.0 Q ss_pred EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEE Q ss_conf 89999718441342357887507865530045568995211275788879988640123346882667630451141023 Q gi|254780460|r 39 RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMV 118 (172) Q Consensus 39 rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V 118 (172) ++++++++ .++.+..++++ +.. + +...++=|..+.-.+=-++++.+.............--+++|.+++ T Consensus 26 ~~~~~~~g-------~~~~~l~~~~~--~~n-~-~~~G~vHGG~l~tl~D~a~g~a~~~~~~~~~~~vT~~l~i~flrp~ 94 (148) T 3f1t_A 26 TVEAADEK-------GLTLRLPYSQA--IIG-N-PESGVVHGGAITTLMDTTCGISTVCVLPDFEICPTLDLRIDYMHPA 94 (148) T ss_dssp EEEEECSS-------CEEEEECGGGG--BCS-C-SSSCCBCHHHHHHHHHHHHHHHGGGTCSSCCCCCEEEEEEEECSCC T ss_pred EEEEEECC-------EEEEEEECCHH--HCC-C-CCCCEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECC T ss_conf 99999499-------89999992789--938-9-9997771789788888887888874357884479977889999705 Q ss_pred CCCCCEEEEEEEEEEEECCCCEEEEEEEEEEEC--CEEEEEEEEEEEEEEC Q ss_conf 379857999999889630785799999999999--9999999710699861 Q gi|254780460|r 119 TPDCKLVEYGIDFKKILRGRVVLGAADGWVKVN--GKEIYQANDLRVCLTI 167 (172) Q Consensus 119 ~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vd--g~~i~~a~~l~vgl~~ 167 (172) .+|+. ++.+.++ .+.++.+++.+++++.| |+++++++.--+.+-+ T Consensus 95 ~~g~~-l~a~a~v---~~~gr~~~~~~~~i~~dd~g~lvA~a~gtf~~~~~ 141 (148) T 3f1t_A 95 EPHKD-VYGFAEC---YRVTPNVIFTRGFAYQDDPGQPIAHVVGAFMRMGL 141 (148) T ss_dssp CTTSC-EEEEEEE---EEECSSEEEEEEEEESSCTTSCSEEEEEEEECC-- T ss_pred CCCCE-EEEEEEE---EEECCCEEEEEEEEEECCCCCEEEEEEEEEEEECC T ss_conf 89975-9999999---99489699999999999999499999999999981 No 20 >2bi0_A Hypothetical protein RV0216; conserved hypothetical, hotdog-fold, structural proteomics in europe, spine, structural genomics; 1.9A {Mycobacterium tuberculosis} SCOP: d.38.1.4 d.38.1.4 Probab=96.19 E-value=0.064 Score=30.43 Aligned_cols=101 Identities=7% Similarity=-0.064 Sum_probs=59.2 Q ss_pred CCCCCCCC-CCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCC- Q ss_conf 78655300-4556899521127578887998864012334688266763045114102337985799999988963078- Q gi|254780460|r 61 ITPNLWFF-DCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGR- 138 (172) Q Consensus 61 i~~d~wff-~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~- 138 (172) ++-|+-|. +....+.++.+|.+.+-.+..+.. .........++.++++|.++|.||| +++.+.+|.++...+ T Consensus 50 lH~D~e~A~~~~gf~~~ia~g~l~~~~~~g~~~-----~~~~~~~a~lg~~~~rf~~PV~~GD-TL~~~~eVi~~r~~~~ 123 (337) T 2bi0_A 50 LALDSDLCAAVTGMPGPLAHPGLVCDVAIGQST-----LATQRVKANLFYRGLRFHRFPAVGD-TLYTRTEVVGLRANSP 123 (337) T ss_dssp HHHCHHHHHHHHCCSSCBCCHHHHHHHHHHHHT-----TTTTTCSEEEEEECEEBSSCCBTTC-EEEEEEEEEEEEECCC T ss_pred CCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHC-----CCCCCCEEEEEEEEEEECCCCCCCC-EEEEEEEEEEEEECCC T ss_conf 477999998627999753167999999876304-----4444210210235679846789999-9999999856860477 Q ss_pred ------CEEEEEEEEEEE-CCEEEEEEEEEEEEEECC Q ss_conf ------579999999999-999999997106998617 Q gi|254780460|r 139 ------VVLGAADGWVKV-NGKEIYQANDLRVCLTID 168 (172) Q Consensus 139 ------~~~~~~~g~~~v-dg~~i~~a~~l~vgl~~d 168 (172) ..++....++.. +|+.|++.+. ++++-+. T Consensus 124 r~~~~~~GiV~~~~~~~NQ~ge~Vl~~~r-~~mv~~r 159 (337) T 2bi0_A 124 KPGRAPTGLAGLRMTTIDRTDRLVLDFYR-CAMLPAS 159 (337) T ss_dssp CTTSCCEEEEEEEEEEECTTCCEEEEEEE-EEEEECC T ss_pred CCCCCCCEEEEEEEEEECCCCCEEEEEEE-EEEEECC T ss_conf 88888616999999999179978999999-8999767 No 21 >1zki_A Hypothetical protein PA5202; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa PAO1} SCOP: d.38.1.5 Probab=96.09 E-value=0.072 Score=30.12 Aligned_cols=105 Identities=11% Similarity=0.094 Sum_probs=59.2 Q ss_pred EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEE Q ss_conf 89999718441342357887507865530045568995211275788879988640123346882667630451141023 Q gi|254780460|r 39 RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMV 118 (172) Q Consensus 39 rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V 118 (172) +++++++ |+++.+..+.++ +.. ...++-|-.+.-.+=.++++...............--+++|.+++ T Consensus 23 ~~~~~~~-------g~~~~~~~~~~~--~~n----~~G~vHGG~~~~l~D~a~~~a~~~~~~~~~~~vT~~l~i~fl~p~ 89 (133) T 1zki_A 23 DPVSLGD-------GVAEVRLPMAAH--LRN----RGGVMHGGALFSLMDVTMGLACSSSHGFDRQSVTLECKINYIRAV 89 (133) T ss_dssp EEEEECS-------SEEEEEEECCGG--GBC----TTSSBCHHHHHHHHHHHHHHHHHHHHCTTSCEEEEEEEEEECSCC T ss_pred EEEEEEC-------CEEEEEEECCHH--HCC----CCCCEEEEEEEEECCCCHHHHHHHHCCCCEEEEEEEEEEEEECCC T ss_conf 9999969-------999999996989--939----999491144899722133567755046530356511546997779 Q ss_pred CCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEE Q ss_conf 3798579999998896307857999999999999999999710 Q gi|254780460|r 119 TPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDL 161 (172) Q Consensus 119 ~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l 161 (172) .+|+ ++.+.+ +.+.++.+++.+++++.+|+++++++.- T Consensus 90 ~~g~--l~~~a~---v~~~gr~~~~~~~~i~~~~~lva~a~~t 127 (133) T 1zki_A 90 ADGE--VRCVAR---VLHAGRRSLVVEAEVRQGDKLVAKGQGT 127 (133) T ss_dssp CSSE--EEEEEE---EEEECSSEEEEEEEEEETTEEEEEEEEE T ss_pred CCCE--EEEEEE---EEEECCCEEEEEEEEEECCEEEEEEEEE T ss_conf 8977--999999---9991899999999999999999999999 No 22 >2qwz_A Phenylacetic acid degradation-related protein; putative thioesterase, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} Probab=96.05 E-value=0.075 Score=30.01 Aligned_cols=128 Identities=9% Similarity=0.082 Sum_probs=72.3 Q ss_pred CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHH Q ss_conf 65589889998418835579988899864122568999971844134235788750786553004556899521127578 Q gi|254780460|r 5 KSSYTYEEILRCGEGEMFGEGNAQLPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGL 84 (172) Q Consensus 5 ~~~f~~~~i~~~~~g~~fg~~~~rLP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~i 84 (172) ..+|+.+++.+|.+. .| +++.+ +| +|+++.+ |.++.+..++++ +.. + .-++=|-.+. T Consensus 21 ~~~~d~~~l~afl~~-~f----~~~~~-~~----~v~~v~~-------g~~~~~~~v~~~--~~N---~-~G~vHGG~~~ 77 (159) T 2qwz_A 21 ELVFDKDGLSAYLEE-VF----PQIQG-EF----SIDALAK-------GEITMRLNVQER--HLR---P-GGTVSGPSMF 77 (159) T ss_dssp CCSSCHHHHHHHHHH-HC----GGGTT-TE----EEEEECS-------SEEEEEECGGGG--CCC---T-TCCCCHHHHH T ss_pred HHHCCHHHHHHHHHH-HC----HHHCC-CE----EEEEEEC-------CEEEEEEECCHH--HCC---C-CCCCCHHHHH T ss_conf 544599999999875-48----32149-77----9999959-------999999998999--939---9-9859299999 Q ss_pred HHHHHHHHHHCC-CCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEEC--CEEEEEEEE Q ss_conf 887998864012-3346882667630451141023379857999999889630785799999999999--999999971 Q gi|254780460|r 85 DALWQLTGFFLG-WLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVN--GKEIYQAND 160 (172) Q Consensus 85 Ea~~Ql~~~~~~-~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vd--g~~i~~a~~ 160 (172) - ++..++.+.. ............-.++.|.+++.+|+. ++.+- ++.+.++.+++.+++++.+ ++++++++. T Consensus 78 s-l~D~a~g~a~~~~~~~~~~~~T~~l~i~flrp~~~g~~-l~a~a---~v~~~Gr~~~~~e~~i~~~~~~~lvA~at~ 151 (159) T 2qwz_A 78 A-LADVSVYALVLAHLGREALAVTTNASLDFMRKPESGRD-LLGQA---RLLKLGRTLAVGDILLFSEGMEAPVARSTM 151 (159) T ss_dssp H-HHHHHHHHHHHHHHCTTCCCEEEEEEEEECSCCCTTSC-EEEEE---EEEEECSSEEEEEEEEEETTCSSCSEEEEE T ss_pred H-HHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCC-EEEEE---EEEEECCCEEEEEEEEEECCCCEEEEEEEE T ss_conf 9-99999999986413699438999830036315535864-79999---999958859999999999999979999999 No 23 >2prx_A Thioesterase superfamily protein; ZP_00837258.1, structural genomics, joint center for structural genomics, JCSG; 1.50A {Shewanella loihica pv-4} Probab=95.79 E-value=0.039 Score=31.73 Aligned_cols=102 Identities=11% Similarity=-0.073 Sum_probs=59.1 Q ss_pred EEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCC---C-C-------CCCCCEEEEEECCCEEEEEECCCC Q ss_conf 5788750786553004556899521127578887998864012---3-3-------468826676304511410233798 Q gi|254780460|r 54 VVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLG---W-L-------GELGKGRAVSVSNIKFRGMVTPDC 122 (172) Q Consensus 54 ~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~---~-~-------~~~~~~~~~~~~~vkfr~~V~Pgd 122 (172) .++++.++++ .+-. ..-++.|-++.-.+=..+++.+. . . ..........--+++|++++.+|+ T Consensus 39 ~v~~~~~~~~--~h~n----~~G~vHGGilaallD~~~g~aa~~~~~~~~~~~~~~~~~~~~~vT~~l~v~y~~pv~~g~ 112 (160) T 2prx_A 39 QTIAHFMPKP--FHTA----IPGFVYGGLIASLIDCHGTGSASAAAQRALEQAGEQLDEPPRFVTAALNIDYLAPTPMGV 112 (160) T ss_dssp EEEEEECCCT--TCBS----STTBBCHHHHHHHHHHHHHHHHHHHHC-------------CCEEEEEEEEEECSCCBTTS T ss_pred EEEEEEEECH--HHCC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCCCC T ss_conf 9999999798--9969----999626888899999987999999753202443345567761487688899902669998 Q ss_pred CEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEE Q ss_conf 5799999988963078579999999999999999997106998 Q gi|254780460|r 123 KLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCL 165 (172) Q Consensus 123 ~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl 165 (172) . ++.+.++. +.++..++.+++++.||+++++++-+-+.+ T Consensus 113 ~-l~~~a~v~---~~~~r~~~v~~~i~~~g~l~A~a~~~fv~v 151 (160) T 2prx_A 113 E-LELVGEIK---EVKPRKVVVEIALSADGKLCARGHMVAVKM 151 (160) T ss_dssp C-EEEEEEEE---EC--CEEEEEEEEEC---CCEEEEEEEEEC T ss_pred E-EEEEEEEE---EECCCEEEEEEEEEECCEEEEEEEEEEEEC T ss_conf 7-99999999---937979999999998999999989999994 No 24 >2h4u_A Thioesterase superfamily member 2; structural genomics, structural genomics consortium, SGC, hydrolase; 2.20A {Homo sapiens} SCOP: d.38.1.5 Probab=95.74 E-value=0.1 Score=29.21 Aligned_cols=104 Identities=14% Similarity=0.060 Sum_probs=61.4 Q ss_pred EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEE Q ss_conf 89999718441342357887507865530045568995211275788879988640123346882667630451141023 Q gi|254780460|r 39 RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMV 118 (172) Q Consensus 39 rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V 118 (172) +|+++.+ |+++.+..++++ +.. +..-+--|++ .-.+=.++++.+... ...........++.|++++ T Consensus 34 ~v~~~~~-------G~~~~~~~v~~~--~~N---~~G~vHGG~l-~tl~D~~~g~a~~~~-~~~~~~~T~~l~~~f~~p~ 99 (145) T 2h4u_A 34 TLVSAAP-------GKVICEMKVEEE--HTN---AIGTLHGGLT-ATLVDNISTMALLCT-ERGAPGVSVDMNITYMSPA 99 (145) T ss_dssp EEEEEET-------TEEEEEEECCGG--GBC---TTSBBCHHHH-HHHHHHHHHHHHHTS-SSCCCCEEEEEEEEECSCC T ss_pred EEEEECC-------CEEEEEEECCHH--HCC---CCCCEEHHHH-HHHHHHHHHHHHHHC-CCCCEEEEEEEEEEEEECC T ss_conf 9999819-------999999986999--939---9997957578-888989887778742-7995048888557897047 Q ss_pred CCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE--CCEEEEEEEE Q ss_conf 37985799999988963078579999999999--9999999971 Q gi|254780460|r 119 TPDCKLVEYGIDFKKILRGRVVLGAADGWVKV--NGKEIYQAND 160 (172) Q Consensus 119 ~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v--dg~~i~~a~~ 160 (172) ..|+ .+..+.++. +.++.+++.+++++. +|+++++++- T Consensus 100 ~~G~-~l~~~a~v~---~~Gr~~~~~~~~v~~~~~g~lvA~a~~ 139 (145) T 2h4u_A 100 KLGE-DIVITAHVL---KQGKTLAFTSVDLTNKATGKLIAQGRH 139 (145) T ss_dssp BTTC-EEEEEEEEE---EECSSEEEEEEEEEETTTCCEEEEEEE T ss_pred CCCC-EEEEEEEEE---ECCCCEEEEEEEEEECCCCEEEEEEEE T ss_conf 9999-999989999---918989999999999999989999989 No 25 >3hrq_A PKS, aflatoxin biosynthesis polyketide synthase; hot-DOG fold, iterative type I PKS, norsolorinic acid, product template domain; HET: PLM; 1.80A {Aspergillus parasiticus} PDB: 3hrr_A* Probab=95.46 E-value=0.13 Score=28.59 Aligned_cols=118 Identities=14% Similarity=0.109 Sum_probs=70.0 Q ss_pred CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCC-C-CC--CCEEE Q ss_conf 86412256899997184413423578875078655300455689952112757888799886401233-4-68--82667 Q gi|254780460|r 31 KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWL-G-EL--GKGRA 106 (172) Q Consensus 31 ~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~-~-~~--~~~~~ 106 (172) +|.|.-|.+|. +..+++ ...++-..+.+++ .++|.-+ | ..++++.|++++++... . .. ....- T Consensus 199 G~~Fr~i~~i~-~~~~~~-----~a~~~v~~~~~~~--~~~~~lh---P--~llD~~lQ~~~~~~~~~~~~~~~~~~~vP 265 (357) T 3hrq_A 199 NPDYMLLDYLV-LNEAEN-----EAASGVDFSLGSS--EGTFAAH---P--AHVDAITQVAGFAMNANDNVDIEKQVYVN 265 (357) T ss_dssp CGGGCCEEEEE-EEGGGT-----EEEEEEEGGGSCC--CSCCSSC---H--HHHHHHHHHHHHHHHTSTTCCTTTEEEEE T ss_pred CCCCEEEEEEE-ECCCCC-----EEEEEEECCCCCC--CCCCCCC---H--HHHHHHHHHHHHHHCCCCCCCCCCEEEEC T ss_conf 83110014589-959962-----7999994476667--8870168---7--89899988999985076666889828981 Q ss_pred EEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEE Q ss_conf 6304511410233798579999998896307857999999999999999999710699 Q gi|254780460|r 107 VSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVC 164 (172) Q Consensus 107 ~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vg 164 (172) .++..+++.+...|+.. +.++++...........+|..++-+|++++.++++.+. T Consensus 266 ~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~Dv~v~d~g~~v~~i~gl~~~ 320 (357) T 3hrq_A 266 HGWDSFQIYQPLDNSKS---YQVYTKMGQAKENDLVHGDVVVLDGEQIVAFFRGLTLR 320 (357) T ss_dssp EEEEEEEECSCCCTTCE---EEEEEECCCC--CCEEEEEEEEEETTEEEEEEEEEEEE T ss_pred CEEEEEEECCCCCCCCE---EEEEEEEEECCCCCEEEEEEEEECCCCEEEEECCEEEE T ss_conf 58768998157899966---99999986369998899999998399499999569999 No 26 >1vh9_A P15, hypothetical protein YBDB; structural genomics, unknown function; 2.15A {Escherichia coli} SCOP: d.38.1.5 Probab=95.46 E-value=0.13 Score=28.59 Aligned_cols=135 Identities=16% Similarity=0.064 Sum_probs=76.5 Q ss_pred CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHH Q ss_conf 65589889998418835579988899864122568999971844134235788750786553004556899521127578 Q gi|254780460|r 5 KSSYTYEEILRCGEGEMFGEGNAQLPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGL 84 (172) Q Consensus 5 ~~~f~~~~i~~~~~g~~fg~~~~rLP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~i 84 (172) |...|.|+|.++.++... -+|=| +++++++ |+++++..++++.. + ....+=|-.+. T Consensus 6 ~~~~~le~ln~~~~~~~~----------~~Lgi-~~~~~~~-------g~~~~~l~v~~~~~--n----~~G~lHGG~~~ 61 (149) T 1vh9_A 6 KRHLTLDELNATSDNTMV----------AHLGI-VYTRLGD-------DVLEAEMPVDTRTH--Q----PFGLLHGGASA 61 (149) T ss_dssp SSCCCHHHHHHTSTTSHH----------HHTTC-EEEEECS-------SCEEEEEECSTTTB--C----TTSSBCHHHHH T ss_pred CCCCCHHHHHHHCCCHHH----------HHCCC-EEEEEEC-------CEEEEEEECCHHHC--C----CCCCCCHHHHH T ss_conf 566899999864723188----------85696-9999979-------98999998788996--9----99957288878 Q ss_pred HHHHHHH-HHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEE Q ss_conf 8879988-64012334688266763045114102337985799999988963078579999999999-999999997106 Q gi|254780460|r 85 DALWQLT-GFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLR 162 (172) Q Consensus 85 Ea~~Ql~-~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~ 162 (172) +++-.+ ++...............--++.|.+++.+|+ ++.+.+ +.+.++.+++.+++++- +|+++++++ .. T Consensus 62 -al~D~a~g~a~~~~~~~~~~~~t~~~~i~fl~~~~~g~--l~a~a~---v~~~Gr~~~~~e~~i~d~~g~lvA~a~-~T 134 (149) T 1vh9_A 62 -ALAETLGSMAGFMMTRDGQCVVGTELNATHHRPVSEGK--VRGVCQ---PLHLGRQNQSWEIVVFDEQGRRCCTCR-LG 134 (149) T ss_dssp -HHHHHHHHHHHHTTCCTTCCEEEEEEEEEECSCCCSSE--EEEEEE---EEEECSSEEEEEEEEECTTSCEEEEEE-EE T ss_pred -HHHHHHHHHHHHHHHCCCCEEEEHHEEEEEECCCCCCE--EEEEEE---EEECCCCEEEEEEEEECCCCCEEEEEE-EE T ss_conf -88888889999974047860670010226762589973--999999---999178899999999928998999998-99 Q ss_pred EEEECCCC Q ss_conf 99861768 Q gi|254780460|r 163 VCLTIDRG 170 (172) Q Consensus 163 vgl~~de~ 170 (172) ..+..++| T Consensus 135 ~~vi~~~~ 142 (149) T 1vh9_A 135 TAVLGEGG 142 (149) T ss_dssp EEECC--- T ss_pred EEEECCCC T ss_conf 99977898 No 27 >3kuv_A Fluoroacetyl coenzyme A thioesterase; fluoroacetyl-COA thioesterase FLK, hot DOG folding, thioeste hydrolase; 1.50A {Streptomyces cattleya} PDB: 3kuw_A 3kvu_A* 3kv7_A 3kv8_A 3kvz_A* 3kw1_A* 3kx7_A 3kx8_A 3kvi_A Probab=95.23 E-value=0.15 Score=28.15 Aligned_cols=103 Identities=10% Similarity=0.000 Sum_probs=60.3 Q ss_pred EEEEECCCCCCCCCCCCCCC-------CEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEE Q ss_conf 88750786553004556899-------52112757888799886401233468826676304511410233798579999 Q gi|254780460|r 56 RAEMDITPNLWFFDCHFKND-------PVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYG 128 (172) Q Consensus 56 ~aek~i~~d~wff~gHFp~~-------PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~ 128 (172) ..++.|++++= .....+++ +|+-+..++--|-.++...+...-.++..-...-.+++|.+++.+|+ +++.. T Consensus 12 ~~~~~V~~~~t-~~~~~~~d~~~~~~~~vlat~~lval~e~a~~~~v~~~L~~g~~tVg~~~~i~hl~pv~~G~-~v~~~ 89 (139) T 3kuv_A 12 THDFVVPPHKT-VRHLYPESPEFAEFPEVFASGFMVGLMEWACVRAMAPYLEPGEGSLGTAICVTHTAATPPGL-TVTVT 89 (139) T ss_dssp EEEEECCGGGB-HHHHCTTCGGGTTCCSCBCHHHHHHHHHHHHHHHTGGGCCTTEEEEEEEEEEECCSCCCTTS-EEEEE T ss_pred EEEEEECHHHH-HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCC-EEEEE T ss_conf 99999996872-26527897544444641217999999999999999951799985899999999974037999-99999 Q ss_pred EEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEE Q ss_conf 99889630785799999999999999999971069 Q gi|254780460|r 129 IDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRV 163 (172) Q Consensus 129 i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~v 163 (172) .++.++.. + .+.++++++.++..|++++--.+ T Consensus 90 a~v~~~~~--~-~~~~~v~a~d~~~~Va~g~~~r~ 121 (139) T 3kuv_A 90 AELRSVEG--R-RLSWRVSAHDGVDEIGSGTHERA 121 (139) T ss_dssp EEEEEEET--T-EEEEEEEEECSSSEEEEEEEEEE T ss_pred EEEEEECC--C-EEEEEEEEEECCCEEEEEEEEEE T ss_conf 99999889--8-99999999999978999999999 No 28 >2f3x_A Transcription factor FAPR; 'HOT-DOG' fold / malonyl-COA complex, gene regulation; HET: MLC; 3.10A {Bacillus subtilis} SCOP: d.38.1.5 Probab=95.17 E-value=0.16 Score=28.04 Aligned_cols=118 Identities=9% Similarity=0.021 Sum_probs=70.3 Q ss_pred CCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEE Q ss_conf 99864122568999971844134235788750786553004556899521127578887998864012334688266763 Q gi|254780460|r 29 LPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVS 108 (172) Q Consensus 29 LP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~ 108 (172) ||..- ++.++++++++. +.+....++++-.+. ...+.-|-++ =+++-.++.++.. ....... T Consensus 38 l~~~e--~~gel~~~~~g~------~a~s~~~v~~~m~~~-----~~givHGg~i-~alaDsaa~~a~~----~~~~vT~ 99 (157) T 2f3x_A 38 LSLDE--VIGEIIDLELDD------QAISILEIKQEHVFS-----RNQIARGHHL-FAQANSLAVAVID----DELALTA 99 (157) T ss_dssp SCGGG--SSSEEEEEETTT------EEEEEEECCGGGBCT-----TTCBBCHHHH-HHHHHHHHHHTSC----SSCCEEE T ss_pred CCHHH--HHHHHEEECCCC------CEEEEEECCHHHHCC-----CCCEECHHHH-HHHHHHHHHHHCC----CCCEEEE T ss_conf 63887--532213662898------359998647888369-----9986838999-9999999998769----9858999 Q ss_pred ECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEECCC Q ss_conf 0451141023379857999999889630785799999999999999999971069986176 Q gi|254780460|r 109 VSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTIDR 169 (172) Q Consensus 109 ~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~de 169 (172) ..+++|.+++.+||. ++.+.++.+...+. .++.++.+..+++++|++++ +-+|+.+ T Consensus 100 ~~~I~Fl~pv~~Gd~-l~a~a~v~~~~~~~-~~~~v~v~~~~g~~iV~~G~---f~v~r~~ 155 (157) T 2f3x_A 100 SADIRFTRQVKQGER-VVAKAKVTAVEKEK-GRTVVEVNSYVGEEIVFSGR---FDMYRSK 155 (157) T ss_dssp EEEEEECSCCBTTCE-EEEEEEEEEEETGG-GEEEEEEEEEETTEEEEEEE---EEEECCC T ss_pred EEEEEEECCCCCCCE-EEEEEEEEEECCCE-EEEEEEEEEEECCEEEEEEE---EEEEEEC T ss_conf 998899467789989-99999999988929-99999999853999999999---9999954 No 29 >1wlu_A PAAI protein, phenylacetic acid degradation protein PAAI; thioesterase, hot DOG fold, structural genomics; 1.45A {Thermus thermophilus HB8} SCOP: d.38.1.5 PDB: 1j1y_A 1wlv_A* 1wm6_A 1wn3_A* 2dsl_A Probab=94.80 E-value=0.2 Score=27.43 Aligned_cols=102 Identities=7% Similarity=-0.051 Sum_probs=59.3 Q ss_pred EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEE Q ss_conf 89999718441342357887507865530045568995211275788879988640123346882667630451141023 Q gi|254780460|r 39 RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMV 118 (172) Q Consensus 39 rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V 118 (172) +++++++ |+++.+..++++..-. ..++-|-.+.-.+-.++++ ...... . ....--++.|.+++ T Consensus 12 ~~~~~~~-------g~~~~~~~~~~~~~n~------~G~~hGG~l~~l~D~a~~~-a~~~~~--~-~vT~~l~v~fl~p~ 74 (136) T 1wlu_A 12 KVLHLAP-------GEAVVAGEVRADHLNL------HGTAHGGFLYALADSAFAL-ASNTRG--P-AVALSCRMDYFRPL 74 (136) T ss_dssp EEEEEET-------TEEEEEEECCGGGBCT------TSSBCHHHHHHHHHHHHHH-HHHTTS--C-EEEEEEEEEECSCC T ss_pred EEEEEEC-------CEEEEEEEECHHHCCC------CCCEECCHHHHHHHHHHHH-HHHCCC--C-EEEEEEEEEEEECC T ss_conf 9999979-------9999999959999299------9958840777767999998-875358--3-58999999998535 Q ss_pred CCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEE Q ss_conf 3798579999998896307857999999999999999999710 Q gi|254780460|r 119 TPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDL 161 (172) Q Consensus 119 ~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l 161 (172) ..|+. ++.+.+ +.+.++..++.+++++.+|+++++++.- T Consensus 75 ~~g~~-l~~~a~---v~~~gr~~~~~~~~i~~~g~lva~a~~t 113 (136) T 1wlu_A 75 GAGAR-VEARAV---EVNLSRRTATYRVEVVSEGKLVALFTGT 113 (136) T ss_dssp CTTCE-EEEEEE---EEEECSSEEEEEEEEEETTEEEEEEEEE T ss_pred CCCCE-EEEEEE---EEEECCCEEEEEEEEEECCEEEEEEEEE T ss_conf 89999-999999---9991887999999999999999999999 No 30 >1o0i_A Hypothetical protein HI1161; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.70A {Haemophilus influenzae} SCOP: d.38.1.5 PDB: 1sc0_A 2b6e_A 3lz7_A Probab=94.47 E-value=0.25 Score=26.95 Aligned_cols=126 Identities=17% Similarity=0.048 Sum_probs=74.7 Q ss_pred CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHH Q ss_conf 65589889998418835579988899864122568999971844134235788750786553004556899521127578 Q gi|254780460|r 5 KSSYTYEEILRCGEGEMFGEGNAQLPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGL 84 (172) Q Consensus 5 ~~~f~~~~i~~~~~g~~fg~~~~rLP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~i 84 (172) |..++-|++.++.++... -+| ==+++++++ |+++.+..++++ +.+ |. .++-|-.+ T Consensus 4 ~k~~~le~ln~~~~~~~~----------~~L-Gi~~~~~~~-------g~~~~~~~v~~~--~~n---~~-g~vHGG~~- 58 (138) T 1o0i_A 4 KKTFTLENLNQLCSNSAV----------SHL-GIEISAFGE-------DWIEATMPVDHR--TMQ---PF-GVLHGGVS- 58 (138) T ss_dssp SSCCCHHHHHHHTSSSHH----------HHT-TCEEEEECS-------SCEEEEEECSTT--TBC---TT-SSBCHHHH- T ss_pred CCCCCHHHHHHHCCCCHH----------HHC-CCEEEEEEC-------CEEEEEEECCHH--HCC---CC-CCCCHHHH- T ss_conf 775889999765633288----------866-979999959-------989999998989--949---99-81838999- Q ss_pred HHHHHHHHHHCCC-CCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEE Q ss_conf 8879988640123-34688266763045114102337985799999988963078579999999999-9999999971 Q gi|254780460|r 85 DALWQLTGFFLGW-LGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQAND 160 (172) Q Consensus 85 Ea~~Ql~~~~~~~-~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~ 160 (172) =+++..++.+... ...........--++.|.+++.+|+ ++.+-+ +.+.++.+.+++++++. +|+++++++- T Consensus 59 ~~l~D~a~~~a~~~~~~~~~~~~Ti~l~i~flrp~~~g~--l~a~a~---v~~~Gr~~~~~~~~v~~~~g~lvA~a~~ 131 (138) T 1o0i_A 59 VALAETIGSLAGSLCLEEGKTVVGLDINANHLRPVRSGK--VTARAT---PINLGRNIQVWQIDIRTEENKLCCVSRL 131 (138) T ss_dssp HHHHHHHHHHHHHHTSCTTEEEEEEEEEEEECSCCCSSE--EEEEEE---EEEECSSEEEEEEEEECTTSCEEEEEEE T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCC--CEEEEE---EEECCCCEEEEEEEEECCCCCEEEEEEE T ss_conf 999999999999985798843787768899985578996--289999---9974888999999999199989999999 No 31 >1vh5_A Hypothetical protein YDII; PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; 1.34A {Escherichia coli} SCOP: d.38.1.5 PDB: 1vi8_A 1sbk_A Probab=94.34 E-value=0.26 Score=26.77 Aligned_cols=132 Identities=14% Similarity=0.011 Sum_probs=74.4 Q ss_pred CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHH Q ss_conf 65589889998418835579988899864122568999971844134235788750786553004556899521127578 Q gi|254780460|r 5 KSSYTYEEILRCGEGEMFGEGNAQLPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGL 84 (172) Q Consensus 5 ~~~f~~~~i~~~~~g~~fg~~~~rLP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~i 84 (172) |-.++.|.|.++.++.. + -+|=| +++++++ |+++.+..++++.. . ...++-|-.+. T Consensus 6 ~~~~~le~ln~~~~~~~--------~--~~Lgi-~~~~~~~-------g~~~~~~~v~~~~~--n----~~g~lHGG~ia 61 (148) T 1vh5_A 6 KRKITLEALNAMGEGNM--------V--GFLDI-RFEHIGD-------DTLEATMPVDSRTK--Q----PFGLLHGGASV 61 (148) T ss_dssp SSCCCHHHHHHTTTTSH--------H--HHTTC-EEEEECS-------SCEEEEEECSTTTB--C----TTSSBCHHHHH T ss_pred CCCCCHHHHHHHCCCCH--------H--HHCCC-EEEEEEC-------CEEEEEEECCHHHC--C----CCCCCCHHHHH T ss_conf 58789999975372517--------8--86495-9999969-------99999999498996--9----99937189999 Q ss_pred HHHHH-HHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEE-ECCEEEEEEEEEE Q ss_conf 88799-886401233468826676304511410233798579999998896307857999999999-9999999997106 Q gi|254780460|r 85 DALWQ-LTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVK-VNGKEIYQANDLR 162 (172) Q Consensus 85 Ea~~Q-l~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~-vdg~~i~~a~~l~ 162 (172) +++. ++++...............--++.|.+++.+|+ +..+.+ +.+.++.+++++++++ -+|+++++++- . T Consensus 62 -tl~D~~~~~a~~~~~~~~~~~~t~~l~i~flr~a~~g~--~~~~a~---vv~~Gr~~~~~~~~i~d~~gklvA~a~~-T 134 (148) T 1vh5_A 62 -VLAESIGSVAGYLCTEGEQKVVGLEINANHVRSAREGR--VRGVCK---PLHLGSRHQVWQIEIFDEKGRLCCSSRL-T 134 (148) T ss_dssp -HHHHHHHHHHHHHTSCTTCEEEEEEEEEEECSCCCSSE--EEEEEE---EEEECSSEEEEEEEEECTTSCEEEEEEE-E T ss_pred -HHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCE--EEEEEE---EEEECCCEEEEEEEEEECCCCEEEEEEE-E T ss_conf -99886444677653036833786666899974688871--899999---9991896999999999089989999989-9 Q ss_pred EEEEC Q ss_conf 99861 Q gi|254780460|r 163 VCLTI 167 (172) Q Consensus 163 vgl~~ 167 (172) ..+.+ T Consensus 135 ~~vl~ 139 (148) T 1vh5_A 135 TAILE 139 (148) T ss_dssp EEEEC T ss_pred EEEEC T ss_conf 99991 No 32 >2hbo_A Hypothetical protein (NP_422103.1); structural genomics, PSI- 2, protein structure initiative, joint center for structural genomics, JCSG; HET: MSE PE4; 1.85A {Caulobacter vibrioides} SCOP: d.38.1.5 Probab=93.57 E-value=0.37 Score=25.89 Aligned_cols=94 Identities=11% Similarity=-0.063 Sum_probs=53.5 Q ss_pred EEEEEEEECCCCCCCCCCCCCCCCEEEHH----HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEE Q ss_conf 35788750786553004556899521127----57888799886401233468826676304511410233798579999 Q gi|254780460|r 53 GVVRAEMDITPNLWFFDCHFKNDPVMPGC----LGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYG 128 (172) Q Consensus 53 G~i~aek~i~~d~wff~gHFp~~PvmPGv----L~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~ 128 (172) |.++.+..+.++.-=. ..++=|- |.=+++..++ ..... ......--++.|.+++.+|+ .+..+ T Consensus 42 g~~~~~~~v~~~h~N~------~G~vHGG~l~~l~D~a~g~a~-----~~~~~-~~~vT~~l~i~fl~p~~~G~-~l~~~ 108 (158) T 2hbo_A 42 GQARLAFRVEEHHTNG------LGNCHGGMLMSFADMAWGRII-----SLQKS-YSWVTVRLMCDFLSGAKLGD-WVEGE 108 (158) T ss_dssp TTTCEEEECCGGGBCS------SSBBCHHHHHHHHHHHHHHHH-----HHHHC-EEEEEEEEEEEECSCCBTTC-EEEEE T ss_pred CEEEEEEECCHHHCCC------CCCCCHHHHHHHHHHHHHHHH-----HHHCC-CCEEEEEEEEEEEECCCCCC-EEEEE T ss_conf 8899999909999399------994948999999999999999-----96179-96277999989987168999-99999 Q ss_pred EEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEE Q ss_conf 9988963078579999999999999999997106 Q gi|254780460|r 129 IDFKKILRGRVVLGAADGWVKVNGKEIYQANDLR 162 (172) Q Consensus 129 i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~ 162 (172) .++. +.++.+++.+++++.+|+++++++..- T Consensus 109 a~v~---~~g~~~~~v~~~v~~~~~~va~atg~f 139 (158) T 2hbo_A 109 GELI---SEEDMLFTVRGRIWAGERTLITGTGVF 139 (158) T ss_dssp EEEE---EEETTEEEEEEEEEETTEEEEEEEEEE T ss_pred EEEE---EECCCEEEEEEEEEECCEEEEEEEEEE T ss_conf 9999---958879999999999999999999999 No 33 >3lw3_A HP0420 homologue; hotdog-fold, structural genomics, unknown function; 1.60A {Helicobacter felis} PDB: 3lwg_A Probab=93.30 E-value=0.41 Score=25.63 Aligned_cols=108 Identities=5% Similarity=-0.004 Sum_probs=62.6 Q ss_pred EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEE Q ss_conf 25689999718441342357887507865530045568995211275788879988640123346882667630451141 Q gi|254780460|r 36 MFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFR 115 (172) Q Consensus 36 miDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr 115 (172) +-=+++++++ |+++.+..++++ +.+. .-++-|-++.- ++-.+..+... .......-.+++|. T Consensus 26 Lg~ei~~~~~-------G~~~~~l~v~~~--~~n~----~G~vHGG~i~t-l~D~a~~~a~~----~~~~vT~~~~i~fl 87 (145) T 3lw3_A 26 LCAELISFGS-------GKATVCLTPKEF--MLCE----DDVVHAGFIVG-AASFAALCALN----KKNSLISSMKVNLL 87 (145) T ss_dssp GSCEEEEEET-------TEEEEEECCCGG--GEEE----TTEECHHHHHH-HHHHHHHHHHC----CTTEEEEEEEEEEC T ss_pred HCEEEEEEEC-------CEEEEEECCCHH--HHCC----CCCCCHHHEEH-HHHHHHHHHHC----CCCEEEEEEEEEEE T ss_conf 2919999969-------989999739989--9297----89184102515-56542166537----78569711325882 Q ss_pred EEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEE Q ss_conf 02337985799999988963078579999999999999999997106998 Q gi|254780460|r 116 GMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCL 165 (172) Q Consensus 116 ~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl 165 (172) +++.+|+. ++.+.++.+ .++...+.+++++++++.+++++--++-+ T Consensus 88 ~p~~~G~~-l~a~A~vv~---~g~r~~~v~vev~~~d~~V~~gt~~~~v~ 133 (145) T 3lw3_A 88 APIEIKQE-IYFNATITH---TSSKKSTIRVEGEFMEIKVFEGDFEILVF 133 (145) T ss_dssp SCCCTTCC-EEEEEEEEE---ECSSEEEEEEEEEETTEEEEEEEEEEEEC T ss_pred CCCCCCCE-EEEEEEEEE---ECCCEEEEEEEEEECCEEEEEEEEEEEEE T ss_conf 12489999-999999999---59949999999999999999999999998 No 34 >3kg6_A CURF; polyketide synthase, double hotdog fold, dehydratase, lyase; 2.70A {Lyngbya majuscula} Probab=92.57 E-value=0.52 Score=25.00 Aligned_cols=73 Identities=19% Similarity=0.104 Sum_probs=32.6 Q ss_pred HHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEE Q ss_conf 78887998864012334688266763045114102337985799999988963078579999999999-99999999710 Q gi|254780460|r 83 GLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDL 161 (172) Q Consensus 83 ~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l 161 (172) .++|+.|++++.+..........-.+++.+++.++. .++ +. +.+ ++.... ..+|..++- +|+++++++++ T Consensus 208 llD~~lq~~~~~~~~~~~~~~~lP~~i~~~~~~~~~--~~~-~~--~~~-~~~~~~---~~~di~~~d~~G~~~~~i~gl 278 (285) T 3kg6_A 208 LLDAAFQIVSYAIPHTETDKIYLPVGVEKFKLYRQT--ISQ-VW--AIA-EIRQTN---LTANIFLVDNQGTVLVELEGL 278 (285) T ss_dssp HHHHHHTTGGGTCC--CCSSCEEEEEEEEEEECCCC--SSC-CE--EEE-EECSST---TEEEEEEECTTCBEEEEEEEE T ss_pred HHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCC--CCE-EE--EEE-EECCCC---EEEEEEEECCCCCEEEEEEEE T ss_conf 999999999998347899838987897779996478--776-99--999-987897---199999998999999999589 Q ss_pred EEE Q ss_conf 699 Q gi|254780460|r 162 RVC 164 (172) Q Consensus 162 ~vg 164 (172) .+. T Consensus 279 ~~k 281 (285) T 3kg6_A 279 RVK 281 (285) T ss_dssp EEE T ss_pred EEE T ss_conf 999 No 35 >3nwz_A BH2602 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, unknown function; HET: COA; 2.57A {Bacillus halodurans} Probab=91.97 E-value=0.62 Score=24.57 Aligned_cols=114 Identities=14% Similarity=0.133 Sum_probs=61.8 Q ss_pred EEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHH-HHHHCCCCCCCCCEEEEEECCCEEEE Q ss_conf 68999971844134235788750786553004556899521127578887998-86401233468826676304511410 Q gi|254780460|r 38 HRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQL-TGFFLGWLGELGKGRAVSVSNIKFRG 116 (172) Q Consensus 38 DrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql-~~~~~~~~~~~~~~~~~~~~~vkfr~ 116 (172) -+++++++ |+++.+..+.+ ++.. |. .++=|-.+. +++.. +++.+.............--+++|.+ T Consensus 54 ~e~~~~e~-------g~~~~~~~v~~--~~~N---~~-G~vHGG~~~-tllD~a~g~a~~~~~~~~~~~vT~~l~i~flr 119 (176) T 3nwz_A 54 IESQERED-------GRFEVRLPIGP--LVNN---PL-NMVHGGITA-TLLDTAMGQMVNRQLPDGQSAVTSELNIHYVK 119 (176) T ss_dssp CEEEECSS-------SCEEEEEECCT--TTBC---TT-SSBCHHHHH-HHHHHHHHHHHHHTSCTTCCEEEEEEEEEECS T ss_pred CEEEEEEC-------CEEEEEEECCH--HHCC---CC-CCCCHHHHH-HHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEC T ss_conf 29999749-------98999998899--9929---99-968299999-99877668997754157871599999999977 Q ss_pred EECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEEECCCCC Q ss_conf 2337985799999988963078579999999999-999999997106998617688 Q gi|254780460|r 117 MVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCLTIDRGV 171 (172) Q Consensus 117 ~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl~~de~~ 171 (172) ++. ++ .++.+.+ +.+.++.+++.+++++- +|+++++++. ...+.+.+|+ T Consensus 120 p~~-g~-~v~a~a~---v~~~gr~~~~~~~~v~~~~G~lvA~a~~-t~~v~~~r~~ 169 (176) T 3nwz_A 120 PGM-GT-YLRAVAS---IVHQGKQRIVVEGKVYTDQGETVAMGTG-SFFVLRSRGL 169 (176) T ss_dssp CCC-SS-EEEEEEE---EEEECSSEEEEEEEEECTTSCEEEEEEE-EEEEC----- T ss_pred CCC-CC-EEEEEEE---EEEECCCEEEEEEEEEECCCCEEEEEEE-EEEEECCCCC T ss_conf 999-98-8999999---9997897999999999899989999999-9999998664 No 36 >2cwz_A Thioesterase family protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.85A {Thermus thermophilus HB8} SCOP: d.38.1.7 Probab=91.36 E-value=0.72 Score=24.17 Aligned_cols=104 Identities=15% Similarity=-0.016 Sum_probs=62.0 Q ss_pred EEEEEECCCCC-CCCCCCCCC-CCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEE Q ss_conf 78875078655-300455689-9521127578887998864012334688266763045114102337985799999988 Q gi|254780460|r 55 VRAEMDITPNL-WFFDCHFKN-DPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFK 132 (172) Q Consensus 55 i~aek~i~~d~-wff~gHFp~-~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik 132 (172) ...++.|++++ |=|.+ .-+ +||+--.-++--|-.++.-.+...-.++..-...-.+++|.+++.+|+ +++.+.++. T Consensus 10 ~~~~~tVte~~~~~f~~-sg~~~pv~at~~lv~~~e~aa~~~l~~~l~~G~~tVg~~~~i~hl~P~~vG~-~V~~~a~v~ 87 (141) T 2cwz_A 10 AVFETVVTPEMTVRFEE-LGPVHPVYATYWMVKHMELAGRKIILPFLEEGEEGIGSYVEARHLASALPGM-RVRVVARHE 87 (141) T ss_dssp EEEEEECCGGGEEEETT-TEEEEEEECHHHHHHHHHHHHHHHHTTTCCTTEEEEEEEEEEEECSCCCTTC-EEEEEEEEE T ss_pred EEEEEEECHHHHHHHHC-CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCC-EEEEEEEEE T ss_conf 99999989899898860-6986630141899999999999999830799983899999999934479999-999999999 Q ss_pred EEECCCCEEEEEEEEEEEC-CEEEEEEEEEEE Q ss_conf 9630785799999999999-999999971069 Q gi|254780460|r 133 KILRGRVVLGAADGWVKVN-GKEIYQANDLRV 163 (172) Q Consensus 133 ~v~~~~~~~~~~~g~~~vd-g~~i~~a~~l~v 163 (172) ++.. + .+.++.+++.+ |++|++++--.+ T Consensus 88 ~v~~--~-~~~f~v~~~d~~g~lI~~G~~~r~ 116 (141) T 2cwz_A 88 KTEG--N-RVYARVEAYNELGDLIGVGRTEQV 116 (141) T ss_dssp EEET--T-EEEEEEEEEETTCCEEEEEEEEEE T ss_pred EECC--C-EEEEEEEEEECCCCEEEEEEEEEE T ss_conf 9889--8-999999999899999999999999 No 37 >3kh8_A MAOC-like dehydratase; hot DOG domain, lyase; 2.00A {Phytophthora capsici} Probab=91.03 E-value=0.64 Score=24.49 Aligned_cols=45 Identities=13% Similarity=0.075 Sum_probs=26.0 Q ss_pred EECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEE Q ss_conf 304511410233798579999998896307857999999999999999999 Q gi|254780460|r 108 SVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQA 158 (172) Q Consensus 108 ~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a 158 (172) ...++||.++|.|||+ ++ +++.+. +...+.+...+.-+|++|.+- T Consensus 275 ~~~~~rF~~PV~pGdt-L~--v~~~~~---~~g~v~f~~~v~~~g~~Vl~g 319 (332) T 3kh8_A 275 KSIRVRFSSPCFPGET-IQ--TRMWQE---GSGKVLFQAVVKERGAVIVDG 319 (332) T ss_dssp EEEEEEECSCCCTTCE-EE--EEEEEC---STTEEEEEEEETTTTEEEEEE T ss_pred EEEEEEEEEEECCCCE-EE--EEEEEE---CCCEEEEEEEECCCCEEEEEC T ss_conf 9999795233779999-99--999993---599899999991399799989 No 38 >3kg9_A CURK; polyketide synthase, double hotdog fold, dehydratase, lyase; 1.70A {Lyngbya majuscula} Probab=88.26 E-value=1.3 Score=22.68 Aligned_cols=119 Identities=15% Similarity=0.086 Sum_probs=63.2 Q ss_pred CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCE-EEEEE Q ss_conf 86412256899997184413423578875078655300455689952112757888799886401233468826-67630 Q gi|254780460|r 31 KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKG-RAVSV 109 (172) Q Consensus 31 ~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~-~~~~~ 109 (172) +++|.-|.++. ... +.+.++..++.+..-...+| .+-| -+++++.|+++.++......... .-.++ T Consensus 174 G~~fr~v~~~~-~~~-------~~~~a~l~l~~~~~~~~~~~---~~hP--~llD~~lq~~~~~~~~~~~~~~~~lP~~i 240 (296) T 3kg9_A 174 GNSFQGIKQLW-KGQ-------GKALGKIALPEEIAGQATDY---QLHP--ALLDAALQILGHAIGNTETDDKAYLPVGI 240 (296) T ss_dssp CGGGCCEEEEE-ECS-------SEEEEEEECCTTTGGGGGGC---SSCH--HHHHHHHTTHHHHHTCTTTCCCEEEEEEE T ss_pred CCCCCCCEEEE-ECC-------CEEEEEEECCHHHCCCCCCC---CCCH--HHHHHHHHHHHHHHCCCCCCCEEEEEEEE T ss_conf 85520431799-969-------84899997683450446772---1187--99999999999984567779868998897 Q ss_pred CCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEEECCCCC Q ss_conf 45114102337985799999988963078579999999999-999999997106998617688 Q gi|254780460|r 110 SNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCLTIDRGV 171 (172) Q Consensus 110 ~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl~~de~~ 171 (172) +++.+.++. . ..+ .++++ +.. .. ..+|..++- +|+++++++++.+.=.+.+.+ T Consensus 241 ~~i~~~~~~--~-~~~--~~~~~-~~~--~~-~~~dv~v~d~~G~~~~~i~gl~~~~v~~~~l 294 (296) T 3kg9_A 241 DKLKQYRQT--I-TQV--WAIVE-IPE--NT-LKGSIKLVDNQGSLLAEIEGLRVTATTADAL 294 (296) T ss_dssp EEEEECSSC--C-SEE--EEEEE-CCT--TC-SSEEEEEECTTCCEEEEEEEEEEEEECSCC- T ss_pred EEEEEECCC--C-CEE--EEEEE-ECC--CC-EEEEEEEECCCCCEEEEEEEEEEEECCHHHH T ss_conf 589996667--8-789--99999-889--97-6999999989999999996799998698992 No 39 >1pn2_A Peroxisomal hydratase-dehydrogenase-epimerase; hot-DOG fold, hydratase 2 motif, lyase; 1.95A {Candida tropicalis} SCOP: d.38.1.4 d.38.1.4 PDB: 1pn4_A* Probab=88.17 E-value=1.3 Score=22.65 Aligned_cols=53 Identities=17% Similarity=0.061 Sum_probs=30.2 Q ss_pred ECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEECCC Q ss_conf 0451141023379857999999889630785799999999999999999971069986176 Q gi|254780460|r 109 VSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTIDR 169 (172) Q Consensus 109 ~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~de 169 (172) -.+++|.++|.|||. ++ +++.+. ....+.+...+..+|+++.+- ..+.+..++ T Consensus 225 ~~~~rf~~pv~~Gdt-l~--~~~~~~---~~~~v~f~~~~~~~g~~vl~~--~~~~~~~~~ 277 (280) T 1pn2_A 225 EIKARFTGIVFPGET-LR--VLAWKE---SDDTIVFQTHVVDRGTIAINN--AAIKLVGDK 277 (280) T ss_dssp EEEEEECSCCCTTCE-EE--EEEEEC---SSSEEEEEEEETTTTEEEEEE--EEEEECC-- T ss_pred EEEEECCCCCCCCCE-EE--EEEEEE---CCCEEEEEEEEECCCEEEEEC--CEEEEECCC T ss_conf 899990777799999-99--999994---798899999992399799959--789993688 No 40 >2egj_A Hypothetical protein AQ_1494; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.80A {Aquifex aeolicus} PDB: 2egi_A 2egr_A Probab=87.51 E-value=1.4 Score=22.41 Aligned_cols=101 Identities=8% Similarity=-0.081 Sum_probs=55.1 Q ss_pred EECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHC---CCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEE Q ss_conf 5078655300455689952112757888799886401---2334688266763045114102337985799999988963 Q gi|254780460|r 59 MDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFL---GWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKIL 135 (172) Q Consensus 59 k~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~---~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~ 135 (172) ..|...|==..|| -+++.... ..-+|....+.-+. ......+......-.+++|++++..||. ++.++.+.++. T Consensus 7 ~~Vr~~d~D~~Gh-v~~~~y~~-~~e~ar~~~~~~~g~~~~~~~~~g~~~~v~~~~~~y~~p~~~~d~-l~v~~~v~~i~ 83 (128) T 2egj_A 7 RRVQFYETDAQGI-VHHSNYFR-YFEEARGEFLRSKGFPYSKMRDMGLEVVLLNAYCEYKKPLFYDDV-FEVHLNLEELS 83 (128) T ss_dssp EECCGGGBCTTSS-BCTHHHHH-HHHHHHHHHHHHTTCCHHHHHHTTEEEEEEEEEEEECSCCCTTCE-EEEEEEEEEEC T ss_pred EEECHHHCCCCCE-ECHHHHHH-HHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEEEECCCCCCCCE-EEEEEEEEEEC T ss_conf 9968899587877-85899999-999999999998299878998669818999999780635523623-79999999959 Q ss_pred CCCCEEEEEEEEEEECCEEEEEEEEEEEEE Q ss_conf 078579999999999999999997106998 Q gi|254780460|r 136 RGRVVLGAADGWVKVNGKEIYQANDLRVCL 165 (172) Q Consensus 136 ~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl 165 (172) + ..+ .+.-.++.+|+++++++...+-+ T Consensus 84 ~--~s~-~~~~~i~~~~~~~a~~~~~~v~~ 110 (128) T 2egj_A 84 R--FTF-TFSYIVFKEDIAVAKANTKHCMV 110 (128) T ss_dssp S--SEE-EEEEEEEETTEEEEEEEEEEEEE T ss_pred C--EEE-EEEEEEEECCEEEEEEEEEEEEE T ss_conf 8--899-99999998999999999999998 No 41 >3kg8_A CURJ; polyketide synthase, double hotdog fold, dehydratase, lyase; 2.45A {Lyngbya majuscula} Probab=87.26 E-value=1.5 Score=22.32 Aligned_cols=123 Identities=12% Similarity=-0.020 Sum_probs=67.7 Q ss_pred CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCC-CCEE-EEE Q ss_conf 86412256899997184413423578875078655300455689952112757888799886401233468-8266-763 Q gi|254780460|r 31 KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGEL-GKGR-AVS 108 (172) Q Consensus 31 ~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~-~~~~-~~~ 108 (172) +|.|..|.+|. +.++ .+.++-.++. ..--..+|. +-|. +++++.|+...++...... ...+ -.+ T Consensus 179 G~~f~~i~~v~-~~~~-------~~~~~i~l~~-~~~~~~~~~---~hP~--~lD~~lq~~~~~~~~~~~~~~~~~lP~~ 244 (308) T 3kg8_A 179 GQSFRWIEQVW-LGEG-------EVLCQMKVPK-TILNTTKYQ---LHPT--LVDSCFQSIIALVLDQSGNKNETFVPFS 244 (308) T ss_dssp CGGGCCEEEEE-ECSS-------EEEEEEECCT-TCCCGGGCS---SCHH--HHHHHHHGGGGGSTTCCSCTTCEEEEEE T ss_pred CCCCCCCCEEE-ECCC-------EEEEEEECCC-CCCCCCCCC---CCHH--HHHHHHHHHHHHHCCCCCCCCCEEEECE T ss_conf 75541332799-8899-------4888883574-445566654---4848--9879999999971455578981895068 Q ss_pred ECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEE-ECCEEEEEEEEEEEEEECCCC Q ss_conf 04511410233798579999998896307857999999999-999999999710699861768 Q gi|254780460|r 109 VSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVK-VNGKEIYQANDLRVCLTIDRG 170 (172) Q Consensus 109 ~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~-vdg~~i~~a~~l~vgl~~de~ 170 (172) ++.+++.++..++ .. ...+......... ....+|..++ -+|+++++++++.+.=.+.+. T Consensus 245 i~~~~~~~~~~~~-~~-~~~~~~~~~~~~~-~~~~~dv~~~d~~G~~~~~l~gl~~r~~~~~~ 304 (308) T 3kg8_A 245 IDKFTFYNSSDND-LL-WCYTCGSKDKQSG-EKFKADIQLFDQHGQLVAQVIGFEGRKANPKI 304 (308) T ss_dssp EEEEEECCCCCCS-EE-EEEEEEEECSSCT-TEEEEEEEEECTTSCEEEEEEEEEEEEECGGG T ss_pred EEEEEEECCCCCC-EE-EEEEEEECCCCCC-CEEEEEEEEECCCCCEEEEEEEEEEEECCHHH T ss_conf 9799997048887-59-9999941466688-77999999998999999999758998569999 No 42 >2cye_A TTHA1846, putative thioesterase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: COA; 1.90A {Thermus thermophilus} SCOP: d.38.1.1 Probab=86.91 E-value=1.6 Score=22.20 Aligned_cols=91 Identities=14% Similarity=-0.055 Sum_probs=53.8 Q ss_pred CCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEE Q ss_conf 04556899521127578887998864012334688266763045114102337985799999988963078579999999 Q gi|254780460|r 68 FDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGW 147 (172) Q Consensus 68 f~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~ 147 (172) ..|| -+++.... +.-||-.+.+.-...... ........-.+++|++++.+||. ++.++.++++... -..+.-. T Consensus 19 ~~gh-v~n~~y~~-~~e~ar~~~~~~~g~~~~-~~~~~vv~~~~~~y~~p~~~~d~-~~v~~~v~~~g~~---s~~~~~~ 91 (133) T 2cye_A 19 PLGH-VNNAVFLS-YMELARIRYFQRISPDWL-EEGHFVVARMEVDYLRPILLGDE-VFVGVRTVGLGRS---SLRMEHL 91 (133) T ss_dssp TTSB-BCHHHHHH-HHHHHHHHHHTTC--CGG-GGGGEEEEEEEEEECSCCBTTCE-EEEEEEEEEECSS---EEEEEEE T ss_pred CCCC-CCHHHHHH-HHHHHHHHHHHHCCCCHH-HCCCEEEEEEEEEECCCCCCCCE-EEEEEEEEECCCE---EEEEEEE T ss_conf 6781-44799999-999999987886399644-47736999998273878899989-9999999991998---9999999 Q ss_pred EEECCEEEEEEEEEEEEE Q ss_conf 999999999997106998 Q gi|254780460|r 148 VKVNGKEIYQANDLRVCL 165 (172) Q Consensus 148 ~~vdg~~i~~a~~l~vgl 165 (172) ++.+|+++++++-..|-+ T Consensus 92 i~~~~~~~a~~~~~~V~~ 109 (133) T 2cye_A 92 VTANGESAAKGLGVLVWL 109 (133) T ss_dssp EEETTEEEEEEEEEEEEE T ss_pred EEECCEEEEEEEEEEEEE T ss_conf 999999999999999998 No 43 >3e8p_A Uncharacterized protein; X-RAY Q8E9M7 SOR246 NESG structure, structural genomics, PSI-2, protein structure initiative; 2.30A {Shewanella oneidensis} Probab=85.93 E-value=1.7 Score=21.89 Aligned_cols=105 Identities=9% Similarity=0.033 Sum_probs=53.7 Q ss_pred EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHH-----HCCCCCCC---------CCE Q ss_conf 8999971844134235788750786553004556899521127578887998864-----01233468---------826 Q gi|254780460|r 39 RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGF-----FLGWLGEL---------GKG 104 (172) Q Consensus 39 rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~-----~~~~~~~~---------~~~ 104 (172) +|+++++ |+++.+..+.++ +. +|. ...++=|-.+. +++..++. .+...... ... T Consensus 40 ~v~~~~~-------g~~~~~l~~~~~--~~-n~~-~~g~vHGG~~~-tl~D~a~g~a~~~~~~~~~~~~~~~~~~~~~~~ 107 (164) T 3e8p_A 40 DIKRYDI-------DGVEVAINMKPE--LI-GNI-HQQILHGGVTA-TVLDVVGGLTAFAGLVASRDDWTIEELQQRLQT 107 (164) T ss_dssp EEEEESS-------SCEEEEEECCGG--GE-EET-TTTEECHHHHH-HHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHH T ss_pred EEEEEEC-------CEEEEEEECCHH--HC-CCC-CCCEEEHHHHH-HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC T ss_conf 9999969-------989999985699--91-888-88746011667-899999999999755333343221112346664 Q ss_pred EEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEE Q ss_conf 6763045114102337985799999988963078579999999999-9999999971 Q gi|254780460|r 105 RAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQAND 160 (172) Q Consensus 105 ~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~ 160 (172) ....--++.|.+++. ++. +..+.+ +.+.++.+++++++++- ||+++++++. T Consensus 108 ~~T~dl~i~flrp~~-~~~-l~a~a~---v~~~Gr~~~~~~~~i~~~~g~lvA~a~~ 159 (164) T 3e8p_A 108 LGTIDMRVDYLRPGR-GQI-FTGTGS---VIRAGNRVSVCRMELHNEQGTHIAFGTG 159 (164) T ss_dssp CEEEEEEEEECSCCC-CSE-EEEEEE---EEECCSSEEEEEEEEEETTCCEEEEEEE T ss_pred CEEEEEEEEEECCCC-CCE-EEEEEE---EEECCCCEEEEEEEEEECCCCEEEEEEE T ss_conf 067778889972688-977-999999---9982798999999999789999999999 No 44 >2oiw_A Putative 4-hydroxybenzoyl-COA thioesterase; structural genomics, PSI-2, protein structure initiative; 2.00A {Geobacillus stearothermophilus} SCOP: d.38.1.1 Probab=85.69 E-value=1.8 Score=21.82 Aligned_cols=92 Identities=10% Similarity=-0.025 Sum_probs=54.7 Q ss_pred CCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEE Q ss_conf 45568995211275788879988640123346882667630451141023379857999999889630785799999999 Q gi|254780460|r 69 DCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWV 148 (172) Q Consensus 69 ~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~ 148 (172) .|| -+++..+. .+-+|....+..+.......+.+....-.+++|++++.+||.+ +.+..+.++ +.......-.+ T Consensus 19 ~gh-v~~~~Y~~-~~e~ar~~~~~~~~~~~~~~~~~~vv~~~~~~y~~~~~~~d~i-~v~~~~~~~---~~~s~~~~~~i 92 (136) T 2oiw_A 19 VGH-INNTTVPV-WFEAGRHEIFKLFTPDLSFKRWRMVIIRMEVDYVNQMYYGQDV-TVYTGIERI---GNTSLTIYEEI 92 (136) T ss_dssp TSS-BCGGGHHH-HHHHHTHHHHHHHSTTCCGGGCCEEEEEEEEEECSCCCTTSCE-EEEEEEEEE---CSSEEEEEEEE T ss_pred CCC-EEHHHHHH-HHHHHHHHHHHHCCCCHHHCCCEEEEEEEEEEECCCCCCCCEE-EEEEEEEEE---CCEEEEEEEEE T ss_conf 882-31699999-9999987677632857123594699999995535206899789-999999994---88499999999 Q ss_pred EECCEEEEEEEEEEEEEE Q ss_conf 999999999971069986 Q gi|254780460|r 149 KVNGKEIYQANDLRVCLT 166 (172) Q Consensus 149 ~vdg~~i~~a~~l~vgl~ 166 (172) +.+|+++++++...|.+- T Consensus 93 ~~~g~~~a~~~~~~v~~d 110 (136) T 2oiw_A 93 HQNGVVCAKGRSVYVNFN 110 (136) T ss_dssp EETTEEEEEEEEEEEEEE T ss_pred EECCEEEEEEEEEEEEEE T ss_conf 999999999999999999 No 45 >3dkz_A Thioesterase superfamily protein; Q7W9W5, borpa, PF03061, NESG, BPR208C, structural genomics, PSI-2, protein structure initiative; 2.40A {Bordetella parapertussis} Probab=85.45 E-value=1.8 Score=21.75 Aligned_cols=113 Identities=13% Similarity=0.068 Sum_probs=61.3 Q ss_pred EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEE Q ss_conf 89999718441342357887507865530045568995211275788879988640123346882667630451141023 Q gi|254780460|r 39 RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMV 118 (172) Q Consensus 39 rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V 118 (172) ++.++++ |.++.+..+.++ +.. + ..++=|-.+.-.+=.++++.+... .........--+++|.+++ T Consensus 22 ~~~~~~~-------g~~~~~~~v~~~--~~n---~-~G~~HGG~l~tl~D~a~g~a~~~~-~~~~~~~T~~l~i~flrp~ 87 (142) T 3dkz_A 22 VPEHSGN-------GTARTRLPARAD--LVN---S-RGDIHGGTLMSVLDFTLGAAIRGD-TPEVGVATIDMNTSFMSPG 87 (142) T ss_dssp EEEEEET-------TEEEEEECCCST--TBC---S-SSSBCHHHHHHHHHHHHHHTTTTS-CTTSCEEEEEEEEEECSCC T ss_pred EEEEEEC-------CEEEEEEECCHH--HCC---C-CCCEEEEEEEEEHHHHHHHHHHHC-CCCCCEEEEEEEEEEECCC T ss_conf 9999969-------999999998999--939---9-996970002120112234566502-7755225577889996787 Q ss_pred CCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEEECCCCC Q ss_conf 37985799999988963078579999999999-999999997106998617688 Q gi|254780460|r 119 TPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCLTIDRGV 171 (172) Q Consensus 119 ~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl~~de~~ 171 (172) . ++ +..+.+ +.+.++.+++.+++++. ||+++++++.-..-+-+.+|+ T Consensus 88 ~-g~--l~~~a~---v~~~gr~~~~~~~~i~~~~g~lvA~a~~t~~i~~~~P~~ 135 (142) T 3dkz_A 88 R-GD--LVIETR---CLRRGASIAFCEGEIRDSAGELVAKATATFKIIQRRPGL 135 (142) T ss_dssp C-SC--EEEEEE---EEEECSSEEEEEEEEEETTCCEEEEEEEEEEECC----- T ss_pred C-CC--EEEEEE---EEEECCCEEEEEEEEEECCCCEEEEEEEEEEEECCCCCC T ss_conf 8-88--999999---999688799999999979999999999999995889986 No 46 >1z54_A Probable thioesterase; hypothetical protein, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus HB8} SCOP: d.38.1.1 Probab=85.07 E-value=1.9 Score=21.64 Aligned_cols=102 Identities=11% Similarity=-0.113 Sum_probs=55.8 Q ss_pred EEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHC---CCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEE Q ss_conf 75078655300455689952112757888799886401---233468826676304511410233798579999998896 Q gi|254780460|r 58 EMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFL---GWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKI 134 (172) Q Consensus 58 ek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~---~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v 134 (172) +-.|..+|==..|| -+++.... ..-+|-...+.-+. ......+......-.+++|++++.+||. ++.+..+.++ T Consensus 6 ~i~Vr~~d~D~~gh-v~~~~y~~-~~~~ar~~~~~~~g~~~~~~~~~g~~~vv~~~~~~y~~p~~~gd~-i~v~~~v~~i 82 (132) T 1z54_A 6 RIKVRYAETDQMGV-VHHSVYAV-YLEAARVDFLERAGLPYHRVEARGVFFPVVELGLTFRAPARFGEV-VEVRTRLAEL 82 (132) T ss_dssp EEECCGGGBCTTSS-BCTTHHHH-HHHHHHHHHHHHTTCCHHHHHTTTEECCEEEEEEEECSCCCTTCE-EEEEEEEEEE T ss_pred EEEECHHHCCCCCC-CCHHHHHH-HHHHHHHHHHHHHCCCHHHHHHCCCEEEEEEEEEECCCCCCCCCE-EEEEEEEEEC T ss_conf 99989999599980-56899999-999999978987089777877669555756232001644699978-9999999991 Q ss_pred ECCCCEEEEEEEEEEECCEEEEEEEEEEEEE Q ss_conf 3078579999999999999999997106998 Q gi|254780460|r 135 LRGRVVLGAADGWVKVNGKEIYQANDLRVCL 165 (172) Q Consensus 135 ~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl 165 (172) . .......-++..+|+++++++-.-+-+ T Consensus 83 ~---~~s~~~~~~i~~~g~~~a~~~~~~v~~ 110 (132) T 1z54_A 83 S---SRALLFRYRVEREGVLLAEGFTRHLCQ 110 (132) T ss_dssp C---SSEEEEEEEEEETTEEEEEEEEEEECE T ss_pred C---CEEEEEEEEEEECCEEEEEEEEEEEEC T ss_conf 9---879999999998999999999999992 No 47 >3kg7_A CURH; polyketide synthase, double hotdog fold, dehydratase, lyase; 2.77A {Lyngbya majuscula} Probab=84.78 E-value=2 Score=21.57 Aligned_cols=119 Identities=14% Similarity=0.125 Sum_probs=64.8 Q ss_pred CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCC-EEEEEE Q ss_conf 8641225689999718441342357887507865530045568995211275788879988640123346882-667630 Q gi|254780460|r 31 KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGK-GRAVSV 109 (172) Q Consensus 31 ~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~-~~~~~~ 109 (172) +|.|.-|.++. ...++ ..+...++.+.. .+.....+-| -+++++.|++..++........ ..-..+ T Consensus 165 G~~f~~i~~~~-~~~~~-------~~~~~~~~~~~~---~~~~~~~~~P--~~lD~~~q~~~~~~~~~~~~~~~~lP~~i 231 (293) T 3kg7_A 165 GPMLQAVRQAW-IGEET-------SLLEIEVPKALA---FQLAGEPIHP--VLIDACTRLTPDLFDFSSDSGVFWAPWRV 231 (293) T ss_dssp CTTTCCEEEEE-ECSSC-------EEEEEECCTTTG---GGCCSCSSCH--HHHHHTTSCCTTGGGSCCSSCCEEEEEEE T ss_pred CCCCCEEEEEE-ECCCC-------EEEEEECCCCCC---CCCCCCCCCH--HHHHHHHHHHHHHHCCCCCCCCCCCCEEE T ss_conf 73110252789-87990-------588886483013---4434556884--78899999999982544578862176698 Q ss_pred CCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEE Q ss_conf 45114102337985799999988963078579999999999-999999997106998 Q gi|254780460|r 110 SNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCL 165 (172) Q Consensus 110 ~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl 165 (172) +.+++.++. ++ .+...+.++...........+|..++- +|+++++++++.+.= T Consensus 232 ~~i~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~di~~~d~~G~~l~~i~gl~~kr 285 (293) T 3kg7_A 232 KEMTLSHPT--PS-RFYAYVEEPSRVNEQLQTRSYDIQLLDETGQAFGRINGFTVKR 285 (293) T ss_dssp EEEEESSCC--CS-EEEEEECSCCEEETTTTEEEEEEEEECSSSBEEEEEEEEEEEE T ss_pred EEEEEECCC--CC-EEEEEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEEEEEEE T ss_conf 699996679--97-4999999912557789779999999989999999997489999 No 48 >1q4t_A Thioesterase; hot-DOG, hydrolase; HET: 4CO; 1.60A {Arthrobacter SP} SCOP: d.38.1.5 PDB: 1q4s_A* 1q4u_A* Probab=84.14 E-value=2.1 Score=21.40 Aligned_cols=108 Identities=11% Similarity=-0.045 Sum_probs=62.2 Q ss_pred EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCC-CCCCCCEEEEEECCCEEEEE Q ss_conf 89999718441342357887507865530045568995211275788879988640123-34688266763045114102 Q gi|254780460|r 39 RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGW-LGELGKGRAVSVSNIKFRGM 117 (172) Q Consensus 39 rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~-~~~~~~~~~~~~~~vkfr~~ 117 (172) +|+++.+ |+++.+..++++ +.+ ...++=|-.+.-.+=.++++.... .............++.|.++ T Consensus 37 ~v~e~~~-------g~~~~~l~v~~~--~~N----~~G~vHGG~~~tl~D~a~g~a~~~~~~~~~~~~vt~~~~i~flrp 103 (151) T 1q4t_A 37 VIDEMTP-------ERATASVEVTDT--LRQ----RWGLVHGGAYCALAEMLATEATVAVVHEKGMMAVGQSNHTSFFRP 103 (151) T ss_dssp EEEEECS-------SEEEEEEECCGG--GBC----TTSSBCHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEESSC T ss_pred EEEEEEC-------CEEEEEEECCHH--HCC----CCCCEEEEEEEEEEHHHHHHHEEEECCCCCCEEEEEEEEEEEECC T ss_conf 9999939-------989999987889--959----998341223888501211122155416777057746677776122 Q ss_pred ECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEEE Q ss_conf 337985799999988963078579999999999-999999997106998 Q gi|254780460|r 118 VTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVCL 165 (172) Q Consensus 118 V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vgl 165 (172) +..|+ ++.+.+ +.+.++.+++.+++++- +|++++.++- ...+ T Consensus 104 ~~~g~--l~a~a~---v~~~Gr~~~~~~~~i~d~~g~lvA~at~-T~~i 146 (151) T 1q4t_A 104 VKEGH--VRAEAV---RIHAGSTTWFWDVSLRDDAGRLCAVSSM-SIAV 146 (151) T ss_dssp CCSSE--EEEEEE---EEEECSSEEEEEEEEECTTCCEEEEEEE-EEEE T ss_pred CCCCE--EEEEEE---EEEECCCEEEEEEEEECCCCCEEEEEEE-EEEE T ss_conf 47975--999999---9996894999999999799999999999-9988 No 49 >3gek_A Putative thioesterase YHDA; X-RAY, structure genomics, NESG, KR113, Q9CHK5_lacla, structural genomics, PSI-2; 2.24A {Lactococcus lactis subsp} Probab=83.79 E-value=2.2 Score=21.31 Aligned_cols=98 Identities=12% Similarity=-0.108 Sum_probs=55.4 Q ss_pred EEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCC-CCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEE Q ss_conf 357887507865530045568995211275788879988640123-3468826676304511410233798579999998 Q gi|254780460|r 53 GVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGW-LGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDF 131 (172) Q Consensus 53 G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~-~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~i 131 (172) ..+.++..|++. ..+ ...++=|-.+ =+++-.++.++.. ...........--++.|.+++.+++. ++.+.+ T Consensus 28 ~~~~~~m~v~~~--h~n----p~G~lHGG~~-aaL~D~a~g~a~~~~~~~~~~~vTi~l~i~flrp~~~g~~-l~a~a~- 98 (146) T 3gek_A 28 YKFSSKMILSDF--HAQ----PQGFLNGGAS-LALAEITAGMASNAIGSGQYFAFGQSINANHLNPKKCEGF-VNARGL- 98 (146) T ss_dssp EEEEEEEECCGG--GBC----TTSBBCHHHH-HHHHHHHHHHHHHHHHTTSCEEEEEEEEEEECSCCBSSSE-EEEEEE- T ss_pred EEEEEEEECCCC--CCC----CCCCEEHHHH-HHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEECCCCE-EEEEEE- T ss_conf 368999985702--529----9981729999-9999999999998737766247899987688774123537-999999- Q ss_pred EEEECCCCEEEEEEEEEEE-CCEEEEEEEEE Q ss_conf 8963078579999999999-99999999710 Q gi|254780460|r 132 KKILRGRVVLGAADGWVKV-NGKEIYQANDL 161 (172) Q Consensus 132 k~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l 161 (172) +.+.++.+++.+++++- +|+++++++-- T Consensus 99 --v~~~Gr~i~~~~~ei~de~gkliA~at~T 127 (146) T 3gek_A 99 --LLKNGKRNHVWEIKITDENETLISQITVV 127 (146) T ss_dssp --EEEECSSEEEEEEEEEETTCCEEEEEEEE T ss_pred --EEECCCCEEEEEEEEECCCCCEEEEEEEE T ss_conf --96359859999999994999999999999 No 50 >2fs2_A Phenylacetic acid degradation protein PAAI; operon, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: d.38.1.5 PDB: 1psu_A Probab=83.48 E-value=2.3 Score=21.23 Aligned_cols=102 Identities=13% Similarity=0.019 Sum_probs=57.1 Q ss_pred EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEE Q ss_conf 89999718441342357887507865530045568995211275788879988640123346882667630451141023 Q gi|254780460|r 39 RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMV 118 (172) Q Consensus 39 rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V 118 (172) |++++++ |+++.+..++++ +.. +. .++=|-.+.= ++-.++.++..... ......-.++.|.+++ T Consensus 26 ~v~~~~~-------g~~~~~~~v~~~--~~n---~~-G~~HGG~l~t-l~D~a~~~a~~~~~--~~~vT~~~~v~fl~p~ 89 (151) T 2fs2_A 26 DIISMDE-------GFAVVTMTVTAQ--MLN---GH-QSCHGGQLFS-LADTAFAYACNSQG--LAAVASACTIDFLRPG 89 (151) T ss_dssp EEEEEET-------TEEEEEEECCGG--GBC---TT-SBBCHHHHHH-HHHHHHHHHHHTTT--CCCEEEEEEEEECSCC T ss_pred EEEEEEC-------CEEEEEEECCHH--HCC---CC-CCEEEEEEHH-HHHHHHHHHHHHCC--CCEEEEEEEEEEEECC T ss_conf 9999969-------999999994999--919---99-9588886011-27899999998469--9479998778897146 Q ss_pred CCCCCEEEEEEEEEEEECCCCEEEEEEEEEE-ECCEEEEEEEE Q ss_conf 3798579999998896307857999999999-99999999971 Q gi|254780460|r 119 TPDCKLVEYGIDFKKILRGRVVLGAADGWVK-VNGKEIYQAND 160 (172) Q Consensus 119 ~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~-vdg~~i~~a~~ 160 (172) ..|+ .++.+.++ .+.++.+++++++++ .+|++|++++. T Consensus 90 ~~G~-~l~a~a~v---~~~Gr~~~~~~~~i~d~~g~lvA~~~g 128 (151) T 2fs2_A 90 FAGD-TLTATAQV---RHQGKQTGVYDIEIVNQQQKTVALFRG 128 (151) T ss_dssp BTTC-EEEEEEEE---EEECSSEEEEEEEEECTTSCEEEEEEE T ss_pred CCCC-EEEEEEEE---EECCCCEEEEEEEEEECCCCEEEEEEE T ss_conf 8998-99999999---991798999999999389979999998 No 51 >3bnv_A CJ0977; virulence factor, hot-DOG fold, flagella, unknown function; HET: MSE; 2.60A {Campylobacter jejuni} Probab=82.49 E-value=2.5 Score=21.00 Aligned_cols=128 Identities=13% Similarity=0.046 Sum_probs=71.9 Q ss_pred CCHHHHHHHCCCCCCCCCCCCCCCCCCE--EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHH Q ss_conf 8988999841883557998889986412--25689999718441342357887507865530045568995211275788 Q gi|254780460|r 8 YTYEEILRCGEGEMFGEGNAQLPKPPML--MFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLD 85 (172) Q Consensus 8 f~~~~i~~~~~g~~fg~~~~rLP~~p~l--miDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iE 85 (172) -|.|++.+..+. . ++.+||- |--+++++++ |+++....++++. .++ ..-++=|-.+. T Consensus 13 ~s~e~~~~i~~~-~-------~~~~~~~~~Lg~elve~~~-------G~a~~~l~~~~~~-~~n----~~G~vHGG~~~- 71 (152) T 3bnv_A 13 ASAEDISRVRAE-L-------LTCPELNTSLAGTIIEIDK-------NYAKSILITTSEM-VAD----DQGLIFDAFIF- 71 (152) T ss_dssp SCHHHHHHHHTT-C-------CSSTTCCHHHHCEEEEEET-------TEEEEEEECCGGG-BSS----TTCBBCHHHHH- T ss_pred CCHHHHHHHHHH-H-------HCCCCHHHHHCEEEEEEEC-------CEEEEEEECCHHH-HCC----CCCEECHHHHH- T ss_conf 799999999986-4-------4388234540869999979-------9899999848999-248----99807156867- Q ss_pred HHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEE Q ss_conf 879988640123346882667630451141023379857999999889630785799999999999999999971069 Q gi|254780460|r 86 ALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRV 163 (172) Q Consensus 86 a~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~v 163 (172) +++-.++.++.. .......-.++.|.+++.+|+.+ +.+- +-+.+.++..++..++++++++.|++++-.++ T Consensus 72 alaD~a~~~a~~----~~~~vT~~~~i~fl~p~~~G~~l-~a~a--~vi~~~~~~~~~v~v~~~~~~~~V~~gtf~~~ 142 (152) T 3bnv_A 72 AAANYVAQASIN----KEFSVIIGSKCFFYAPLKLGDVL-ELEA--HALFDETSKKRDVKVVGHVKEIKMFEGTIQVV 142 (152) T ss_dssp HHHHHHHHHHHC----CSSEEEEEEEEEECSCCBTTCEE-EEEE--EECCCSSCSEEEEEEEEEETTEEEEEEEEEEE T ss_pred HHHHHHHHHHCC----CCCCCHHHEEEEECCCCCCCCEE-EEEE--EEEEECCCEEEEEEEEEEECCEEEEEEEEEEE T ss_conf 899999775426----88705111001560367899999-9999--99998997499999999889999999999999 No 52 >2ov9_A Hypothetical protein; rhodococcus SP. RHA1, RHA08564, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Rhodococcus SP} SCOP: d.38.1.5 Probab=82.19 E-value=2.5 Score=20.93 Aligned_cols=98 Identities=13% Similarity=0.098 Sum_probs=56.3 Q ss_pred EEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEE Q ss_conf 35788750786553004556899521127578887998864012334688266763045114102337985799999988 Q gi|254780460|r 53 GVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFK 132 (172) Q Consensus 53 G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik 132 (172) |.++++.++.+ ++.|+ .-++=|-++.=.+=.++++.....+. .....--+++|++++..|+ .++.+.++. T Consensus 110 g~v~~~~t~~~---~~~G~---pG~vHGGvia~llD~~~g~a~~~~g~---~~vT~~L~v~y~~p~p~g~-~l~~~a~v~ 179 (216) T 2ov9_A 110 GSVRGTVTLTI---PYQGP---PGHVHGGVSALLLDHVLGVANAWGGK---AGMTAQLSTRYHRPTPLFE-PLTLTGKLM 179 (216) T ss_dssp SCEEEEEECCG---GGBSS---TTBBCHHHHHHHHHHHHHHHHHHTTC---CCEEEEEEEEECSCCBSSS-EEEEEEEEE T ss_pred CEEEEEEEECH---HHCCC---CCCEEHHHHHHHHHHHHHHHHHCCCC---CEEEEEEEEEEEECCCCCC-EEEEEEEEE T ss_conf 98999999898---99599---98112779999999999999854599---6488887889962468797-799999999 Q ss_pred EEECCCCEEEEEEEEEEE-CCEEEEEEEEEEE Q ss_conf 963078579999999999-9999999971069 Q gi|254780460|r 133 KILRGRVVLGAADGWVKV-NGKEIYQANDLRV 163 (172) Q Consensus 133 ~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~v 163 (172) ++. ....+..++++. ||+++++++.+-+ T Consensus 180 ~~~---grk~~~~~~i~~~dG~l~A~A~g~fV 208 (216) T 2ov9_A 180 SVD---GRKITTAGDIRTADGQVCVSVEGLFV 208 (216) T ss_dssp EEE---TTEEEEEEEEECTTCCEEEEEEEEEE T ss_pred EEC---CCEEEEEEEEEECCCCEEEEEEEEEE T ss_conf 967---97999999999699989999999999 No 53 >3el6_A Erythromycin dehydratase; dehydratase double hotdog fold CIS-proline, acyltransferase, antibiotic biosynthesis; 1.85A {Saccharopolyspora erythraea} Probab=82.01 E-value=2.6 Score=20.89 Aligned_cols=106 Identities=17% Similarity=0.043 Sum_probs=49.4 Q ss_pred CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC Q ss_conf 86412256899997184413423578875078655300455689952112757888799886401233468826676304 Q gi|254780460|r 31 KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVS 110 (172) Q Consensus 31 ~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~ 110 (172) ++.|..|.++. ...+ ...+...+..+.- +..+-|. .++++.|++...... .......-.+++ T Consensus 194 Gp~fq~i~~~~-~~~~-------~~~a~~~~~~~~~-------~~~lhPa--lLDa~lQ~~~~~~~~-~~~~~~lP~~i~ 255 (313) T 3el6_A 194 GPSFQALRAAW-RKDD-------SVYAEVSIAADEE-------GYAFHPV--LLDAVAQTLSLGALG-EPGGGKLPFAWN 255 (313) T ss_dssp CGGGCCEEEEE-EETT-------EEEEEEECCCCCC-------CCSSCHH--HHHHHHHGGGGSTTC-C----CCEEEEE T ss_pred CCCCCCCCEEE-ECCC-------EEEEEEEECCCCC-------CCCCCHH--HHHHHHHHHHHHHCC-CCCCEEEEEEEE T ss_conf 78533363599-8799-------0678998336555-------6537856--889999999997436-899579868996 Q ss_pred CCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEEEEEE Q ss_conf 5114102337985799999988963078579999999999-99999999710699 Q gi|254780460|r 111 NIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQANDLRVC 164 (172) Q Consensus 111 ~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~l~vg 164 (172) .+++.++ |+. .+ .+++... ... .+|..++- +|+++++++++.+. T Consensus 256 ~l~i~~~--~~~-~~--~~~~~~~--~~~---~~dv~l~d~~G~~l~~i~gl~~r 300 (313) T 3el6_A 256 TVTLHAS--GAT-SV--RVVATPA--GAD---AMALRVTDPAGHLVATVDSLVVR 300 (313) T ss_dssp EEEESCS--SCS-EE--EEEEEEC--STT---EEEEEEECTTSCEEEEEEEEEEC T ss_pred EEEEECC--CCC-EE--EEEEEEC--CCC---EEEEEEECCCCCEEEEEEEEEEE T ss_conf 9999768--998-79--9999988--998---89999998999999999628967 No 54 >1t82_A Hypothetical acetyltransferase; structural genomics, alpha-beta dimeric protein with A fold resembling A hotdog, PSI; 1.70A {Shewanella oneidensis mr-1} SCOP: d.38.1.5 Probab=80.99 E-value=2.8 Score=20.67 Aligned_cols=104 Identities=17% Similarity=0.246 Sum_probs=57.6 Q ss_pred EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHC----CCCCCCCCEEEEEECCCEE Q ss_conf 899997184413423578875078655300455689952112757888799886401----2334688266763045114 Q gi|254780460|r 39 RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFL----GWLGELGKGRAVSVSNIKF 114 (172) Q Consensus 39 rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~----~~~~~~~~~~~~~~~~vkf 114 (172) +|++++++ .++.+..+++| +..| .-+-=|+|. +++-+.++++ +............-.+++| T Consensus 35 ~i~~~~~~-------~~~~~~p~~~n---~N~~---g~~hGG~l~--tlad~a~~~~~~~~l~~~~~~~~~vt~~~~i~y 99 (155) T 1t82_A 35 APLSFTDG-------ELSVSAPLAPN---INLH---HTMFAGSIY--TIMTLTGWGMVWLQQQLLNVDGDIVLADAHIRY 99 (155) T ss_dssp EEEEEETT-------EEEEECCSGGG---BCTT---SSBCHHHHH--HHHHHHHHHHHHHHHHHHTCCCEEEEEEEEEEE T ss_pred EEEEECCC-------EEEEEECCCHH---CCCC---CCEEHHHHH--HHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEE T ss_conf 99994199-------79999457421---0788---861010566--666578999998553204678638998888999 Q ss_pred EEEECCCCCEEEEEEEEEE-----EECCCCEEEEEEEEEEECCEEEEEEEE Q ss_conf 1023379857999999889-----630785799999999999999999971 Q gi|254780460|r 115 RGMVTPDCKLVEYGIDFKK-----ILRGRVVLGAADGWVKVNGKEIYQAND 160 (172) Q Consensus 115 r~~V~Pgd~~i~~~i~ik~-----v~~~~~~~~~~~g~~~vdg~~i~~a~~ 160 (172) .+++..+ -+. +.++.+ +.++++..+....+++.||+++++++. T Consensus 100 lrPa~~~-i~a--~~~~~~~~~~~l~~~gr~~~~v~v~v~ddg~lvA~~~G 147 (155) T 1t82_A 100 LAPVTSA-PEV--KVRWPDTNLSPLQRGRKAKVKLEVQLFCDGKLCAQFDG 147 (155) T ss_dssp CSCCCSC-CEE--EEECCSCCCGGGGGTCCEEEEEEEEEEETTEEEEEEEE T ss_pred ECCCCCC-EEE--EEEECHHHHHHHHCCCEEEEEEEEEEEECCEEEEEEEE T ss_conf 5257897-399--99962675558760873799999999889999999999 No 55 >2oaf_A Thioesterase superfamily; YP_508616.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: CIT PGE; 2.00A {Jannaschia SP} SCOP: d.38.1.1 Probab=80.61 E-value=2.9 Score=20.59 Aligned_cols=105 Identities=11% Similarity=-0.048 Sum_probs=58.3 Q ss_pred EEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHC------CCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEE Q ss_conf 75078655300455689952112757888799886401------233468826676304511410233798579999998 Q gi|254780460|r 58 EMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFL------GWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDF 131 (172) Q Consensus 58 ek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~------~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~i 131 (172) +..|...|==..|| -+++.... ..-||..+.+.-++ ......+.+....-..+.|++++.+||. ++.++.+ T Consensus 20 ~~~Vr~~d~D~~G~-v~~~~Y~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~p~~~gd~-i~i~~~i 96 (151) T 2oaf_A 20 DVRVTWGDCDPAKI-AYTGHLPR-FALEAIDAWWSEYHGPGGWYHLELDTNVGTPFVRLEMDFKSPVTPRHI-LKCHTWP 96 (151) T ss_dssp EECCCGGGBCTTSS-BCGGGHHH-HHHHHHHHHHHHHTCTTHHHHHHHTTCEECCEEEEEEEECSCCCTTSC-EEEEEEE T ss_pred EEEECHHHCCCCCE-ECHHHHHH-HHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEEEEEEEEEECCCCCC-EEEEEEE T ss_conf 99928899688875-65389999-999999999987414431056787469069999999689331029960-7899999 Q ss_pred EEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEECC Q ss_conf 8963078579999999999999999997106998617 Q gi|254780460|r 132 KKILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTID 168 (172) Q Consensus 132 k~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~d 168 (172) .++... . ..+.-.+..+|+++++++...|.+-.+ T Consensus 97 ~~~g~~--s-~~~~~~~~~~g~~~a~~~~~~v~vd~~ 130 (151) T 2oaf_A 97 TRLGTK--S-ITFRVDGVQDGVTCFVGAFTCVFTIAD 130 (151) T ss_dssp EEECSS--E-EEEEEEEEETTEEEEEEEEEEEEEEGG T ss_pred EEECCE--E-EEEEEEEECCCEEEEEEEEEEEEEECC T ss_conf 997986--9-999999832983799999999999899 No 56 >2hx5_A Hypothetical protein; NP_895880.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.50A {Prochlorococcus marinus str} SCOP: d.38.1.1 Probab=78.49 E-value=3.4 Score=20.19 Aligned_cols=105 Identities=3% Similarity=-0.214 Sum_probs=57.2 Q ss_pred EEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCC---------C--CCCCCEEEEEECCCEEEEEECCCCCEE Q ss_conf 87507865530045568995211275788879988640123---------3--468826676304511410233798579 Q gi|254780460|r 57 AEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGW---------L--GELGKGRAVSVSNIKFRGMVTPDCKLV 125 (172) Q Consensus 57 aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~---------~--~~~~~~~~~~~~~vkfr~~V~Pgd~~i 125 (172) -++.|..+|==..||- +++...- +.-+|....+.-+... . ...+......-..++|++++.++|. + T Consensus 10 ~~~~Vr~~D~D~~Ghv-~~~~y~~-~~e~ar~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~v~~~~i~y~~p~~~~d~-i 86 (152) T 2hx5_A 10 LRRVVRFGDTDAAGVM-HFHQLFR-WCHESWEESLESYGLNPADIFPGSRKSEVTPEVALPIIHCQADFRRPIHTGDA-L 86 (152) T ss_dssp EEEECCGGGBCTTSSB-CTTHHHH-HHHHHHHHHHHHHTCCHHHHCTTCTTCSSCCSEECCEEEEEEEECSCCCTTCE-E T ss_pred EEEEECHHHCCCCCCC-CHHHHHH-HHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCE-E T ss_conf 9999888990898847-4799999-99999999999809987785202343201486689999999997246779969-9 Q ss_pred EEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEEC Q ss_conf 999998896307857999999999999999999710699861 Q gi|254780460|r 126 EYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTI 167 (172) Q Consensus 126 ~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~ 167 (172) +.++.+.++... -..+...++.+|+++++++...|.+-. T Consensus 87 ~v~~~v~~~~~~---s~~~~~~i~~~~~~~a~~~~~~v~~d~ 125 (152) T 2hx5_A 87 AMELRPERLNPN---SFQVHFEFRCEEQIAAHALIRHLAINA 125 (152) T ss_dssp EEEEEEEEEETT---EEEEEEEEEETTEEEEEEEEEEECEET T ss_pred EEEEEEEEECCE---EEEEEEEEEECCEEEEEEEEEEEEEEC T ss_conf 999999984986---999999999999999999999999989 No 57 >2gf6_A Conserved hypothetical protein; putative thioesterase, structural genomics, joint center for structural genomics, JCSG; HET: COA; 1.91A {Sulfolobus solfataricus} SCOP: d.38.1.1 Probab=78.27 E-value=3.4 Score=20.15 Aligned_cols=62 Identities=10% Similarity=-0.041 Sum_probs=42.7 Q ss_pred CEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEECC Q ss_conf 266763045114102337985799999988963078579999999999999999997106998617 Q gi|254780460|r 103 KGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCLTID 168 (172) Q Consensus 103 ~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl~~d 168 (172) ......-..++|++++.+|++ ++....+.++.+ .-....-.++.||+++++++...+.+-.+ T Consensus 56 ~~~vv~~~~~~y~~~~~~~~~-v~v~~~v~~~~~---~s~~~~~~i~~~g~~~a~~~~~~v~~d~~ 117 (135) T 2gf6_A 56 LWFVIAESHAIYHRPVKLGDK-LTVLLNPKILSN---KTIKFEFKVLKDGELTTEGYVIQIAINPK 117 (135) T ss_dssp EEEEEEEEEEEECSCCCTTCE-EEEEEEEEECSS---SEEEEEEEEEETTEEEEEEEEEEEEEETT T ss_pred CEEEEEEEECCCCCCCCCCEE-EEEEEEEEEECC---CEEEEEEEEEECCEEEEEEEEEEEEEECC T ss_conf 679999870004762115617-999999999535---59999999975998999999999999999 No 58 >1yoc_A Hypothetical protein PA1835; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa PAO1} SCOP: d.38.1.5 Probab=78.23 E-value=3.4 Score=20.14 Aligned_cols=110 Identities=9% Similarity=-0.047 Sum_probs=56.8 Q ss_pred EEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCC-CCCCCCEEEEEECCCEEEE Q ss_conf 689999718441342357887507865530045568995211275788879988640123-3468826676304511410 Q gi|254780460|r 38 HRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGW-LGELGKGRAVSVSNIKFRG 116 (172) Q Consensus 38 DrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~-~~~~~~~~~~~~~~vkfr~ 116 (172) =||++++++ +++.+..+.++ +..|+ ..+=|-.+. +++...+.+... .-.........--+++|.+ T Consensus 34 ~~v~~i~~g-------~~~~~lp~~~~---~~N~~---g~~HGGai~-~laD~a~g~a~~~~~~~~~~~vt~~l~i~flr 99 (147) T 1yoc_A 34 PQFVELRPG-------YAEVTFPKRRE---VLNHI---GTVHAIALC-NAAELAAGTMTDASIPAGHRWIPRGMTVEYLA 99 (147) T ss_dssp CEEEEEETT-------EEEEEECCCGG---GBCTT---SSBCHHHHH-HHHHHHHHHHHHHHSCTTEEEEEEEEEEEECS T ss_pred CEEEEEECC-------EEEEEEECCHH---HCCCC---CCEEHHHHH-HHHHHHHHHHHHEECCCCCEEEEEEEEEEEEE T ss_conf 499999799-------99999977999---90999---838599999-99999986788607399962787888889970 Q ss_pred EECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEE Q ss_conf 2337985799999988963078579999999999999999997106998 Q gi|254780460|r 117 MVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCL 165 (172) Q Consensus 117 ~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl 165 (172) +.. |+ ++.+.++..+..++..-.........||+.|++++ +...+ T Consensus 100 pa~-g~--~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~Va~a~-~T~~v 144 (147) T 1yoc_A 100 KAT-GD--VRAVADGSQIDWQATGNLVVPVVAYVDDKPVFRAE-ITMYV 144 (147) T ss_dssp CCC-SC--EEEEEECTTSCTTCCEEEEEEEEEEETTEEEEEEE-EEEEE T ss_pred CCC-CC--EEEEEEEEEEEECCCEEEEEEEEEECCCCEEEEEE-EEEEE T ss_conf 257-96--89999999821745217999999984996899999-99999 No 59 >3hdu_A Putative thioesterase; YP_461911.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.50A {Syntrophus aciditrophicus SB} Probab=77.25 E-value=3.7 Score=19.97 Aligned_cols=48 Identities=4% Similarity=-0.160 Sum_probs=33.0 Q ss_pred EECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEEC-CEEEEEEEE Q ss_conf 30451141023379857999999889630785799999999999-999999971 Q gi|254780460|r 108 SVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVN-GKEIYQAND 160 (172) Q Consensus 108 ~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vd-g~~i~~a~~ 160 (172) .--++.|.+++.++ . ++.+- ++.+.++.+++++++++-+ |+++++++. T Consensus 104 ~~l~v~flrp~~~~-~-~~a~a---~v~~~Gr~~~~~~~~i~~~~g~lvA~at~ 152 (157) T 3hdu_A 104 MSLHVEYLRPGLGR-E-FVCTG---YNVRTGNKVAVIRTELMNDQDELIAVGSV 152 (157) T ss_dssp EEEEEEESSCCCCS-E-EEEEE---EEEEECSSEEEEEEEEEETTCCEEEEEEE T ss_pred EEEEEEEECCCCCC-C-CEEEE---EEEEECCCEEEEEEEEEECCCCEEEEEEE T ss_conf 99999986258888-7-06999---99993898999999999789999999999 No 60 >1sh8_A Hypothetical protein PA5026; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.50A {Pseudomonas aeruginosa} SCOP: d.38.1.5 Probab=76.70 E-value=3.8 Score=19.88 Aligned_cols=108 Identities=17% Similarity=0.123 Sum_probs=59.0 Q ss_pred EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCC--CCCCCCEEEEEECCCEEEE Q ss_conf 89999718441342357887507865530045568995211275788879988640123--3468826676304511410 Q gi|254780460|r 39 RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGW--LGELGKGRAVSVSNIKFRG 116 (172) Q Consensus 39 rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~--~~~~~~~~~~~~~~vkfr~ 116 (172) ||+++++ |+++.+..+.++ .. |+ .-+.=|++ . +++-++++.+.. ...........-.+++|++ T Consensus 27 ~v~~i~~-------g~~~l~~p~~~~---~N-~~--G~~hGG~~-~-tlaD~a~g~a~~~~~~~~~~~~~t~~~~i~fl~ 91 (154) T 1sh8_A 27 RAEVLEP-------GYVRLRMPGAGN---EN-HI--GSMYAGAL-F-TLAELPGGALFLTSFDSARFYPIVKEMTLRFRR 91 (154) T ss_dssp EEEEEET-------TEEEEEECSTTC---BC-TT--SSBCHHHH-H-HHHHTHHHHHHHHHSCTTTEEEEEEEEEEEECS T ss_pred EEEEEEC-------CEEEEEEECCCC---CC-CC--CCEEHHHH-H-HHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEC T ss_conf 9999969-------999999984702---18-99--85849999-9-999999999999747877825999763689842 Q ss_pred EECCCCCEEEEEEEEE---------EEECCCCEEEEEEEEEE-ECCEEEEEEEEEEEEE Q ss_conf 2337985799999988---------96307857999999999-9999999997106998 Q gi|254780460|r 117 MVTPDCKLVEYGIDFK---------KILRGRVVLGAADGWVK-VNGKEIYQANDLRVCL 165 (172) Q Consensus 117 ~V~Pgd~~i~~~i~ik---------~v~~~~~~~~~~~g~~~-vdg~~i~~a~~l~vgl 165 (172) ++. ++ ++.+.++. ++.+.++..+.++++++ -||+++++++. ...+ T Consensus 92 pa~-g~--~~a~a~~~~~~~~~~~~~~~~~gr~~~~~~~~i~d~~g~lvA~~~~-~~~i 146 (154) T 1sh8_A 92 PAK-GD--IRVEARLDAERIRQLETEAGERGKAEYSLELQLTDEQGEVVAESAA-LYQL 146 (154) T ss_dssp CCC-SC--EEEEEECCHHHHHHHHHHHHHHSEEEEEEEEEEECTTCCEEEEEEE-EEEE T ss_pred CCC-CC--EEEEEEECCHHHHHHHHHHEECCCEEEEEEEEEECCCCCEEEEEEE-EEEE T ss_conf 567-86--8999997400256776674027835899999999299999999999-9999 No 61 >3khp_A MAOC family protein; dehydrogenase, oxidoreductase, structural genomics; HET: TLA; 2.30A {Mycobacterium tuberculosis H37RV} Probab=74.44 E-value=4.4 Score=19.53 Aligned_cols=25 Identities=16% Similarity=0.175 Sum_probs=16.8 Q ss_pred EEECCCEEEEEECCCCCEEEEEEEEEEE Q ss_conf 6304511410233798579999998896 Q gi|254780460|r 107 VSVSNIKFRGMVTPDCKLVEYGIDFKKI 134 (172) Q Consensus 107 ~~~~~vkfr~~V~Pgd~~i~~~i~ik~v 134 (172) ..-.++||+++|.|||++ + +++.+. T Consensus 254 ~~~~~~rf~~pv~~gdtl-~--~~~~~~ 278 (311) T 3khp_A 254 ITSIAARFTKPVFPGETL-S--TVIWRT 278 (311) T ss_dssp EEEEEEEECSCCCTTCCE-E--EEEEEE T ss_pred EEEEEEEEECCCCCCCEE-E--EEEEEE T ss_conf 999999930157899999-9--999998 No 62 >3bjk_A Acyl-COA thioester hydrolase HI0827; hotdog fold, trimer of dimers, YCIA, structural genomics, structure 2 function project, S2F; HET: CIT; 1.90A {Haemophilus influenzae rd KW20} PDB: 1yli_A* Probab=71.73 E-value=5.1 Score=19.14 Aligned_cols=92 Identities=13% Similarity=-0.067 Sum_probs=53.3 Q ss_pred CCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEE Q ss_conf 13423578875078655300455689952112757888799886401233468826676304511410233798579999 Q gi|254780460|r 49 NYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYG 128 (172) Q Consensus 49 ~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~ 128 (172) ....|.++-..-+.|.+.-..| .+-|--+++-|-.++++.+ ...........+++++.|+++|..|| .+.++ T Consensus 10 ~~~~g~~~~~~~v~P~~~N~~G------~l~GG~l~~~~D~~a~~~a-~~~~~~~~vt~svd~i~F~~pv~~Gd-~i~~~ 81 (153) T 3bjk_A 10 RQSKGVLLLRTLAMPSDTNANG------DIFGGWIMSQMAMGGAILA-KEIAHGRVVTVAVESMNFIKPISVGD-VVCCY 81 (153) T ss_dssp --CCSEEEEEEECCGGGBCTTS------SBCHHHHHHHHHHHHHHHH-HHHHTSCEEEEEEEEEEECSCCCTTC-EEEEE T ss_pred CCCCCEEEEEEECCCCCCCCCC------EEEHHHHHHHHHHHHHHHH-HHHCCCCEEEEEEEEEEEECCCCCCC-EEEEE T ss_conf 8998569999981742358798------0848999999999999999-98769946999972488733227996-89999 Q ss_pred EEEEEEECCCCEEEEEEEEEEEC Q ss_conf 99889630785799999999999 Q gi|254780460|r 129 IDFKKILRGRVVLGAADGWVKVN 151 (172) Q Consensus 129 i~ik~v~~~~~~~~~~~g~~~vd 151 (172) -+|..+ ++.......++++. T Consensus 82 a~V~~~---GrsS~~V~v~v~~e 101 (153) T 3bjk_A 82 GQCLKV---GRSSIKIKVEVWVK 101 (153) T ss_dssp EEEEEE---CSSEEEEEEEEEEE T ss_pred EEEEEE---CCEEEEEEEEEEEE T ss_conf 999984---13778998999996 No 63 >2w3x_A CALE7; hydrolase, hotdog fold, thioesterase, enediyne biosynthesis; HET: JEF; 1.75A {Micromonospora echinospora} Probab=68.15 E-value=6.1 Score=18.68 Aligned_cols=64 Identities=5% Similarity=-0.037 Sum_probs=39.5 Q ss_pred CCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEE---ECCEEEEEEEEEEEEEECC Q ss_conf 8826676304511410233798579999998896307857999999999---9999999997106998617 Q gi|254780460|r 101 LGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVK---VNGKEIYQANDLRVCLTID 168 (172) Q Consensus 101 ~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~---vdg~~i~~a~~l~vgl~~d 168 (172) .+......-.+++|++++..+|. ++.++.+.++.+ ..+ .+.-.++ .+|+++++++-..+-+-.+ T Consensus 54 ~~~~~vv~~~~~~y~~~~~~~d~-i~v~~~i~~~~~--~s~-~~~~~i~~~~~~~~~~a~~~~~~v~vd~~ 120 (147) T 2w3x_A 54 ADLKLFTLKAECEFFAELAPFDR-LAVRMRLVELTQ--TQM-ELGFDYLRLGGDDLLVARGRQRIACMRGP 120 (147) T ss_dssp TTEEEEEEEEEEEECSCCCTTCE-EEEEEEEEEECS--SEE-EEEEEEEEESSSEEEEEEEEEEEEEEESS T ss_pred CCEEEEEEEEEEEECCCCCCCEE-EEEEEEEEEECC--CEE-EEEEEEEEECCCCEEEEEEEEEEEEEECC T ss_conf 89079999999999653458827-999999999089--399-99999999379988999999999999988 No 64 >3e29_A Uncharacterized protein Q7WE92_borbr; Q7WE92 NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Bordetella bronchiseptica} Probab=67.24 E-value=6.3 Score=18.56 Aligned_cols=105 Identities=11% Similarity=0.032 Sum_probs=55.3 Q ss_pred EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEE Q ss_conf 89999718441342357887507865530045568995211275788879988640123346882667630451141023 Q gi|254780460|r 39 RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMV 118 (172) Q Consensus 39 rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V 118 (172) +++++++ |+++++..+.++. . +-+...++=|-.+. +++-.++.++...... ......--++.|.+++ T Consensus 25 ~v~~~~~-------~~~~~~~~~~~~~--~--~~~~~G~vHGG~l~-tl~D~~~g~a~~~~~~-~~~~Ti~l~i~flrp~ 91 (144) T 3e29_A 25 SVLEAGE-------QGIVLGIKWREEL--I--SSPEIRSTHGGILA-TLVDAAGDYAVALKTG-HPVPTMDMHVDYHRVA 91 (144) T ss_dssp EEEEESS-------SCEEEEECCCGGG--B--SCTTTTCBCHHHHH-HHHHHHHHHHHHHHHS-SCCCEEEEEEEECSCC T ss_pred EEEEEEC-------CEEEEEEECCHHH--C--CCCCCCEEEHHHHH-HHHHHHHHHHHHCCCC-CCEEEEEEEEEEECCC T ss_conf 9999979-------9999999948999--3--89988637154677-8887888999863579-8258788999997678 Q ss_pred CCCCCEEEEEEEEEEEECCCCEEEEEEEEEEEC-CEEEEEEEEE Q ss_conf 379857999999889630785799999999999-9999999710 Q gi|254780460|r 119 TPDCKLVEYGIDFKKILRGRVVLGAADGWVKVN-GKEIYQANDL 161 (172) Q Consensus 119 ~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vd-g~~i~~a~~l 161 (172) .+|+ ++.+.++ .+.++.+++++++++-+ |+++++++.. T Consensus 92 ~~g~--l~a~a~v---~~~Gr~~~~~~~~i~~~~g~lvA~a~~t 130 (144) T 3e29_A 92 TPGD--LRAEGQV---IHFGKRFATAHARVLDMDGNLVASGRAL 130 (144) T ss_dssp CSSC--EEEEEEE---EEECSSEEEEEEEEEETTCCEEEEEEEE T ss_pred CCCE--EEEEEEE---EEECCCEEEEEEEEEECCCCEEEEEEEE T ss_conf 8966--9999999---9928879999999997999999999999 No 65 >1s5u_A Protein YBGC; structural genomics, hypothetical protein, thioesterase fold, PSI, protein structure initiative; 1.70A {Escherichia coli} SCOP: d.38.1.1 Probab=64.35 E-value=7.2 Score=18.23 Aligned_cols=64 Identities=13% Similarity=0.080 Sum_probs=41.7 Q ss_pred CCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEE-ECCEEEEEEEEEEEEEECC Q ss_conf 8826676304511410233798579999998896307857999999999-9999999997106998617 Q gi|254780460|r 101 LGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVK-VNGKEIYQANDLRVCLTID 168 (172) Q Consensus 101 ~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~-vdg~~i~~a~~l~vgl~~d 168 (172) .+.+....-.+++|++++.+||. ++....+.++... .+ ...-.++ .+|+++++++...+-+-.+ T Consensus 55 ~g~~~vv~~~~~~y~~~~~~~d~-i~v~~~v~~~~~~--~~-~~~~~i~~~~g~~~a~~~~~~v~~d~~ 119 (138) T 1s5u_A 55 ERVAFVVRKMTVEYYAPARLDDM-LEIQTEITSMRGT--SL-VFTQRIVNAENTLLNEAEVLVVCVDPL 119 (138) T ss_dssp TTCEEEEEEEEEEECSCCCTTCE-EEEEEEEEEECSS--EE-EEEEEEECTTCCEEEEEEEEEEEEETT T ss_pred CCCEEEEEEEEEEEEHHHCCCCE-EEEEEEEEECCCE--EE-EEEEEEEECCCEEEEEEEEEEEEEECC T ss_conf 78059998640012033126842-7889999875975--99-999999925837999999999999999 No 66 >3e1e_A Thioesterase family protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Silicibacter pomeroyi} Probab=61.59 E-value=8.1 Score=17.92 Aligned_cols=104 Identities=10% Similarity=0.094 Sum_probs=55.9 Q ss_pred EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC-CCEEEEE Q ss_conf 899997184413423578875078655300455689952112757888799886401233468826676304-5114102 Q gi|254780460|r 39 RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVS-NIKFRGM 117 (172) Q Consensus 39 rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~-~vkfr~~ 117 (172) +++++++ |.++.+..+++ ++.. + ..++=|-.+.- ++-+++.+..............++ ++.|.++ T Consensus 27 ~i~~~~~-------g~v~~~l~~~~--~~~n---~-~g~vHGG~~~~-l~D~~~~~a~~~~~~~~~~~~T~~l~i~flrp 92 (141) T 3e1e_A 27 RIDTLLP-------GRVELCMPYDR--ALTQ---Q-HGFLHAGIVST-VLDSACGYAAFSLMEEEAAVLTVEFKVNFLNP 92 (141) T ss_dssp EEEEEET-------TEEEEEEECCG--GGBC---T-TSSBCHHHHHH-HHHHHHHHHHHTTSCTTEEEEEEEEEEEECSC T ss_pred EEEEEEC-------CEEEEEEECCH--HHCC---C-CCCEEHHHHHH-HHHHHHHHHHHHHHCCCCCEEEEEEEEEEECC T ss_conf 9999959-------99999999898--9949---9-99482524567-76778999999742124531668999998725 Q ss_pred ECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE--C--CEEEEEEEEE Q ss_conf 337985799999988963078579999999999--9--9999999710 Q gi|254780460|r 118 VTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV--N--GKEIYQANDL 161 (172) Q Consensus 118 V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v--d--g~~i~~a~~l 161 (172) +. |+. +..+-+ +.+.++.+++.+++++. | ++++++++-- T Consensus 93 ~~-g~~-l~~~a~---v~~~gr~~~~~~~~i~~~~d~~~~lvA~a~~T 135 (141) T 3e1e_A 93 AE-GER-FAFRAE---VVKPGRTLTVATATAYAFRDGEERAIATMTAT 135 (141) T ss_dssp CC-SSE-EEEEEE---EEECCSSEEEEEEEEEEESSSCEEEEEEEEEE T ss_pred CC-CCE-EEEEEE---EEECCCCEEEEEEEEEEEECCCCCEEEEEEEE T ss_conf 89-988-999999---99948879999999999628998599999999 No 67 >1s9c_A Peroxisomal multifunctional enzyme type 2; hot-DOG fold, hydratase 2 motif, lyase; 3.00A {Homo sapiens} SCOP: d.38.1.4 d.38.1.4 PDB: 2cdh_S Probab=60.93 E-value=8.3 Score=17.85 Aligned_cols=91 Identities=15% Similarity=0.131 Sum_probs=41.4 Q ss_pred CCCCCCCCC-CCCCCCCEEEHHHHHHHHHHHHH-HHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCC Q ss_conf 786553004-55689952112757888799886-4012334688266763045114102337985799999988963078 Q gi|254780460|r 61 ITPNLWFFD-CHFKNDPVMPGCLGLDALWQLTG-FFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGR 138 (172) Q Consensus 61 i~~d~wff~-gHFp~~PvmPGvL~iEa~~Ql~~-~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~ 138 (172) |+-|.-|.+ ..|+ +||+.|.+..=-+.+++. .+.. +.. .. ..-.+++|.++|.|||. ++.++ .+ .+ T Consensus 197 iH~d~~~A~~~gf~-~~i~hG~~t~~~~~~~~~~~~~~--~~~--~~-~~~~~~rf~~PV~~gdt-l~~~~--~~---~~ 264 (298) T 1s9c_A 197 LHIDPNFASLAGFD-KPILHGLCTFGFSARRVLQQFAD--NDV--SR-FKAVKARFAKPVYPGQT-LQTEM--WK---EG 264 (298) T ss_dssp GGTCHHHHHTTTCS-SCCCCHHHHHHHHHHHHHHHHST--TCG--GG-EEEEEEEECSCCCTTCE-EEEEE--EE---ET T ss_pred EEECHHHHHHCCCC-CCEECHHHHHHHHHHHHHHHHCC--CCC--EE-EEEEEEEECCCCCCCCE-EEEEE--EE---EC T ss_conf 77099999557899-82233078999998888876168--882--36-89999997146599999-99999--99---89 Q ss_pred CEEEEEEEEEEECCEEEEEEEEEEEEEE Q ss_conf 5799999999999999999971069986 Q gi|254780460|r 139 VVLGAADGWVKVNGKEIYQANDLRVCLT 166 (172) Q Consensus 139 ~~~~~~~g~~~vdg~~i~~a~~l~vgl~ 166 (172) .. +.+...+.-+|+++..- ..+.+. T Consensus 265 ~~-~~~~~~~~~~g~~vl~~--~~~~l~ 289 (298) T 1s9c_A 265 NR-IHFQTKVQETGDIVISN--AYVDLA 289 (298) T ss_dssp TE-EEEEEEETTTTEEEEEE--EEEEEC T ss_pred CE-EEEEEEECCCCEEEEEC--CEEEEC T ss_conf 99-99999993599499859--579993 No 68 >2hlj_A Hypothetical protein; putative thioesterase, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.00A {Pseudomonas putida KT2440} SCOP: d.38.1.1 Probab=47.25 E-value=14 Score=16.51 Aligned_cols=102 Identities=9% Similarity=-0.059 Sum_probs=54.0 Q ss_pred EEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCC---CCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEE Q ss_conf 750786553004556899521127578887998864012---33468826676304511410233798579999998896 Q gi|254780460|r 58 EMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLG---WLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKI 134 (172) Q Consensus 58 ek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~---~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v 134 (172) +..|.+++==+.||--+ .--....-+|..+.+.-+.. .....+......-.+++|++++.-||. ++.+..+.++ T Consensus 9 ~~~V~~~~~D~~gH~nn--a~Yl~~~e~ar~~~~~~~G~~~~~~~~~g~~~vv~~~~i~y~~~~~~gd~-l~V~~~i~~~ 85 (157) T 2hlj_A 9 RTTVQEDWVDYNGHLRD--AFYLLIFSYATDALMDRIGLDADSRGQSGNSLFTLEAHINYLHEVKLGTE-VWVQTQILGF 85 (157) T ss_dssp EEECCGGGBCTTSBBCH--HHHHHHHHHHHHHHHHHHTTTTTSTTTTTTTEEEEEEEEEECSCCBTTCE-EEEEEEEEEE T ss_pred EEEECHHHCCCCCCCHH--HHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEEEEEEEEECCCCCCCCC-EEEEEEEEEE T ss_conf 88988899077777217--99999999999999999588887874041478999999996301077721-7999999970 Q ss_pred ECCCCEEEEEEEEEEE--CCEEEEEEEEEEEEE Q ss_conf 3078579999999999--999999997106998 Q gi|254780460|r 135 LRGRVVLGAADGWVKV--NGKEIYQANDLRVCL 165 (172) Q Consensus 135 ~~~~~~~~~~~g~~~v--dg~~i~~a~~l~vgl 165 (172) ... . ......++. +|+++++++...|.+ T Consensus 86 ~~~--~-~~~~~~i~~~~~~~~~a~~~~~~v~v 115 (157) T 2hlj_A 86 DRK--R-LHVYHSLHRAGFDEVLAASEQMLLHV 115 (157) T ss_dssp CSS--E-EEEEEEEEETTEEEEEEEEEEEEEEB T ss_pred CCE--E-HHHHHHHHHCCCCCEEEEEEEEEEEE T ss_conf 890--7-65747878657780478851679999 No 69 >2v1o_A Cytosolic acyl coenzyme A thioester hydrolase; alternative splicing, acyl-COA thioesterase 7, serine esterase, protein structure, domain duplication; HET: COA; 1.78A {Mus musculus} Probab=46.30 E-value=15 Score=16.42 Aligned_cols=84 Identities=8% Similarity=-0.063 Sum_probs=43.5 Q ss_pred EEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCC-CCCC----CCCEEEEEECCCEEEEEECCCCCEEEEEEEEE Q ss_conf 750786553004556899521127578887998864012-3346----88266763045114102337985799999988 Q gi|254780460|r 58 EMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLG-WLGE----LGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFK 132 (172) Q Consensus 58 ek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~-~~~~----~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik 132 (172) .+-|.|++.-..|. +.=| -+++=|-.++++... +... .......+++++.|..++.+|| .+.++..|. T Consensus 3 ~rlv~P~d~N~~G~-----l~GG-~ll~~~D~~a~~~A~~h~~~~~~~~~~~vta~vd~i~F~~Pv~~gd-~l~~~a~V~ 75 (151) T 2v1o_A 3 MRIMRPDDANVAGN-----VHGG-TILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMCIGE-VAHVSAEIT 75 (151) T ss_dssp EEECCGGGBCTTSB-----BCHH-HHHHHHHHHHHHHHHHHHTTTCCSCEEEEEEEECCEECCSCCBTTC-EEEEEEEEE T ss_pred EEEECHHHCCCCCC-----EEHH-HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCCCC-EEEEEEEEE T ss_conf 28988667587880-----9289-9999999999999999846666787358999971699917767895-699999999 Q ss_pred EEECCCCEEEEEEEEEEEC Q ss_conf 9630785799999999999 Q gi|254780460|r 133 KILRGRVVLGAADGWVKVN 151 (172) Q Consensus 133 ~v~~~~~~~~~~~g~~~vd 151 (172) .+.+ .. .....++++. T Consensus 76 ~~G~--sS-~eV~v~v~~~ 91 (151) T 2v1o_A 76 YTSK--HS-VEVQVHVMSE 91 (151) T ss_dssp EECS--SC-EEEEEEEEEE T ss_pred ECCC--CE-EEEEEEEEEE T ss_conf 7477--46-9999999998 No 70 >1lo7_A 4-hydroxybenzoyl-COA thioesterase; hot DOG fold, catalytic mechanism, hydrolase; HET: 4CO; 1.50A {Pseudomonas SP} SCOP: d.38.1.1 PDB: 1bvq_A* 1lo8_A* 1lo9_A* Probab=45.83 E-value=15 Score=16.38 Aligned_cols=108 Identities=13% Similarity=-0.115 Sum_probs=52.3 Q ss_pred EEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCC------CCCCCEEEEEECCCEEEEEECCCCCEEEEE Q ss_conf 78875078655300455689952112757888799886401233------468826676304511410233798579999 Q gi|254780460|r 55 VRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWL------GELGKGRAVSVSNIKFRGMVTPDCKLVEYG 128 (172) Q Consensus 55 i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~------~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~ 128 (172) +.-+..|...|==..|| -+++..-- .+-+|-...+.-..... .....+....-..++|++++..||. ++.+ T Consensus 5 ~~~~~~V~~~d~D~~G~-v~~~~y~~-~~e~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~p~~~gd~-i~v~ 81 (141) T 1lo7_A 5 ITMQQRIEFGDCDPAGI-VWYPNYHR-WLDAASRNYFIKCGLPPWRQTVVERGIVGTPIVSCNASFVCTASYDDV-LTIE 81 (141) T ss_dssp EEEEEECCGGGBCTTSS-BCTHHHHH-HHHHHHHHHHHHTTCCCHHHHHHHHCEEECCEEEEEEEECSCCCTTCE-EEEE T ss_pred EEEEEEECHHHCCCCCC-CCHHHHHH-HHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEEEEEEEECCCCCCE-EEEE T ss_conf 99999978899289880-95899999-999999999998388701356886489279999999435414799979-9999 Q ss_pred EEEEEEECCCCEEEEEEEEEE-----ECCEEEEEEEEEEEEEECC Q ss_conf 998896307857999999999-----9999999997106998617 Q gi|254780460|r 129 IDFKKILRGRVVLGAADGWVK-----VNGKEIYQANDLRVCLTID 168 (172) Q Consensus 129 i~ik~v~~~~~~~~~~~g~~~-----vdg~~i~~a~~l~vgl~~d 168 (172) +.++++.+.. + .+.-+++ .+++++++++...|-+-.| T Consensus 82 ~~v~~~~~~s--~-~~~~~i~~~~~~~~~~~~a~~~~~~v~v~~d 123 (141) T 1lo7_A 82 TCIKEWRRKS--F-VQRHSVSRTTPGGDVQLVMRADEIRVFAMND 123 (141) T ss_dssp EEEEEECSSE--E-EEEEEEEEECTTSCEEEEEEEEEEEEEEEEE T ss_pred EEEEEECCEE--E-EEEEEEEECCCCCCCEEEEEEEEEEEEEECC T ss_conf 9999949789--9-9999999987788978999999999999788 No 71 >2fuj_A Conserved hypothetical protein; structural genomics, X-RAY diffraction, hot DOG domain acyl-COA thioesterase, hydrolase; 1.70A {Xanthomonas campestris PV} SCOP: d.38.1.1 Probab=45.18 E-value=15 Score=16.32 Aligned_cols=84 Identities=8% Similarity=-0.062 Sum_probs=46.3 Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE---CCEEEEEE Q ss_conf 578887998864012334688266763045114102337985799999988963078579999999999---99999999 Q gi|254780460|r 82 LGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV---NGKEIYQA 158 (172) Q Consensus 82 L~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v---dg~~i~~a 158 (172) ..-+|-.+.+.-+.......+......-.+++|++++..||. ++..+.+.++.+. . ....-+++. +|++++++ T Consensus 36 ~~e~ar~~~~~~~~~~~~~~~~~~~v~~~~~~y~~p~~~gd~-i~v~~~v~~~g~~--s-~~~~~~i~~~~~~g~l~a~~ 111 (137) T 2fuj_A 36 YLEEARVRWMLGVEGVAMTDRIAPVVAATNVNYKRPLVWPND-ILVELFVERLGSS--S-VTIGHRILDQKDEGVLYSDG 111 (137) T ss_dssp HHHHHHHHHHHHSSSCCCCCSSEEEEEEEEEEECSCCCTTCC-EEEEEEEEEECSS--E-EEEEEEEEESSCTTCEEEEE T ss_pred HHHHHHHHHHHCCCCCHHCCCEEEEEEEEEEEEECCCCCCCE-EEEEEEEEEECCE--E-EEEEEEEEECCCCCEEEEEE T ss_conf 999999977632253022067468999999988546668806-9999999993882--9-99999999989998999999 Q ss_pred EEEEEEEECCC Q ss_conf 71069986176 Q gi|254780460|r 159 NDLRVCLTIDR 169 (172) Q Consensus 159 ~~l~vgl~~de 169 (172) +-..|.+-.+. T Consensus 112 ~~~~v~vd~~~ 122 (137) T 2fuj_A 112 NVVVVWIDTQT 122 (137) T ss_dssp EEEEEEESSSC T ss_pred EEEEEEEECCC T ss_conf 99999999999 No 72 >2xem_A DYNE7, TEBC; biosynthetic protein, polyketide biosynthesis, enediyne anti agent, thioesterase; HET: SSV; 2.10A {Micromonospora chersina} PDB: 2xfl_A Probab=43.74 E-value=16 Score=16.19 Aligned_cols=64 Identities=13% Similarity=0.068 Sum_probs=37.5 Q ss_pred CCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE--CCEEEEEEEEEEEEE Q ss_conf 688266763045114102337985799999988963078579999999999--999999997106998 Q gi|254780460|r 100 ELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV--NGKEIYQANDLRVCL 165 (172) Q Consensus 100 ~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v--dg~~i~~a~~l~vgl 165 (172) ..+.+....-..++|++++.+||. ++.++.+.++......+ ..+..... +++++++++-..|-+ T Consensus 57 ~~g~~~~v~~~~~~y~~p~~~gd~-i~v~~~v~~~~~~s~~~-~~~~~~~~~~~~~~~a~g~~~~V~v 122 (150) T 2xem_A 57 ADGLALVTVDCHADFYAEGSAFDE-VEVRMMLDRLDGHRIAM-SFDYVRVAPGPPTLLAQGRQTVACM 122 (150) T ss_dssp TTTEEEEEEEEEEEECSCCCTTCE-EEEEEEEEEEETTEEEE-EEEEEEEESSSCEEEEEEEEEEEEE T ss_pred HCCCEEEEEEEEEEECCCCCCCEE-EEEEEEEEECCCCEEEE-EEEEEEECCCCCEEEEEEEEEEEEE T ss_conf 479649999999475853579907-99999999748739999-9999997499988999999999999 No 73 >1y7u_A Acyl-COA hydrolase; structural genomics, coenzyme A, protein structure initiative, PSI, midwest center for structural genomics, MCSG; HET: COA; 2.80A {Bacillus cereus} SCOP: d.38.1.1 Probab=42.24 E-value=17 Score=16.05 Aligned_cols=89 Identities=11% Similarity=-0.136 Sum_probs=50.8 Q ss_pred EEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEE Q ss_conf 35788750786553004556899521127578887998864012334688266763045114102337985799999988 Q gi|254780460|r 53 GVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFK 132 (172) Q Consensus 53 G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik 132 (172) +.+.....|.|++.-. ...+=|-.+++-|-.++++... ..........+++++.|..++..|| .+.++-+|. T Consensus 18 ~~~~~~~~v~P~~~N~------~g~l~GG~ll~~~D~~a~~~a~-~~~~~~~vt~svd~i~F~~Pv~~Gd-~l~~~a~V~ 89 (174) T 1y7u_A 18 SRVFKTSRVFPTDLND------HNTLFGGKILSEMDMVASISAS-RHSRKECVTASMDWVDFLHPVRSSD-CVSYESFVI 89 (174) T ss_dssp GCEEEEEECCGGGBCT------TSSBCHHHHHHHHHHHHHHHHH-HHHCSEEEEEEECCCCCCSCCCTTC-EEEEEEEEE T ss_pred CEEEEEEEECHHHCCC------CCCEEHHHHHHHHHHHHHHHHH-HHCCCCEEEEEECCEEECCCCCCCC-EEEEEEEEE T ss_conf 4899998888788588------9834489999999999999999-9649944999987689747667895-799999981 Q ss_pred EEECCCCEEEEEEEEEEECC Q ss_conf 96307857999999999999 Q gi|254780460|r 133 KILRGRVVLGAADGWVKVNG 152 (172) Q Consensus 133 ~v~~~~~~~~~~~g~~~vdg 152 (172) .+ ++.......+++..+ T Consensus 90 ~~---GrsS~~V~v~v~~~~ 106 (174) T 1y7u_A 90 WT---GRTSMEVFVKVVSEY 106 (174) T ss_dssp EE---CSSEEEEEEEEEEEC T ss_pred EC---CCCEEEEEEEEEEEE T ss_conf 05---883799999999985 No 74 >2o5u_A Thioesterase; putative thioesterese,, hydrolase; 1.91A {Pseudomonas aeruginosa} SCOP: d.38.1.1 PDB: 2av9_A 2o6t_A 2o6b_A 2o6u_A Probab=39.81 E-value=18 Score=15.82 Aligned_cols=95 Identities=11% Similarity=-0.095 Sum_probs=52.2 Q ss_pred CCCCCCCCEEEHHHHHHHHHHHHHHHCC-CCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEE Q ss_conf 4556899521127578887998864012-334688266763045114102337985799999988963078579999999 Q gi|254780460|r 69 DCHFKNDPVMPGCLGLDALWQLTGFFLG-WLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGW 147 (172) Q Consensus 69 ~gHFp~~PvmPGvL~iEa~~Ql~~~~~~-~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~ 147 (172) .|| -++++.. ..+-||..+.+.-... .....+......-.+++|+.++.+||++ ...+.+.++... . ...... T Consensus 29 ~Gh-vn~~~Y~-~~~e~ar~~~~~~~g~~~~~~~~~~~vv~~~~~~y~~~~~~gd~l-~i~~~i~~~~~~--s-~~~~~~ 102 (148) T 2o5u_A 29 YGH-VNNVTYY-AFFDTAVNTYLIERGGLDIQGGEVIGLVVSSSCDYFAPVAFPQRI-EMGLRVARLGNS--S-VQYELA 102 (148) T ss_dssp TSS-BCHHHHH-HHHHHHHHHHHHHHHCCCTTTCSEEEEEEEEEEEECSCCCTTSCE-EEEEEEEEECSS--E-EEEEEE T ss_pred CCC-CCHHHHH-HHHHHHHHHHHHHCCCCHHHHCCEEEEEEEEEEEECCCCCCCCCE-EEEEEEEECCCC--E-EEEEEE T ss_conf 885-2679999-999999999875115331541885799999999972766589725-999999847986--9-999999 Q ss_pred EEE--CCEEEEEEEEEEEEEECCC Q ss_conf 999--9999999971069986176 Q gi|254780460|r 148 VKV--NGKEIYQANDLRVCLTIDR 169 (172) Q Consensus 148 ~~v--dg~~i~~a~~l~vgl~~de 169 (172) ++. +|+++++++...|.+-.+. T Consensus 103 i~~~~~g~l~a~~~~~~v~id~~t 126 (148) T 2o5u_A 103 LFLEGQREACAAGRFVHVFVERRS 126 (148) T ss_dssp EEESSCCBCSEEEEEEEEEEETTT T ss_pred EEECCCCEEEEEEEEEEEEEECCC T ss_conf 999999979999999999998999 No 75 >2eis_A Hypothetical protein TTHB207; COA binding motif, NPPSFA, national project on protein structural and functional analyses; HET: COA; 2.10A {Thermus thermophilus HB8} Probab=39.11 E-value=19 Score=15.75 Aligned_cols=96 Identities=14% Similarity=-0.041 Sum_probs=48.9 Q ss_pred EECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCC Q ss_conf 50786553004556899521127578887998864012334688266763045114102337985799999988963078 Q gi|254780460|r 59 MDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGR 138 (172) Q Consensus 59 k~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~ 138 (172) ..|-|.+.-.. -.+-|--+++=+-.+++ ++............+++++.|+++|..|| .+.++.++..+ + T Consensus 8 ~~V~P~~~N~~------G~l~GG~ll~~~D~~a~-~~a~~~~~~~~vt~~vd~i~F~~pv~~Gd-~l~~~a~v~~~---G 76 (133) T 2eis_A 8 YPVFPGETNHY------GTLFGGTVLAWMDQAAF-VAATRHARKKVVTVHADAVDFKRPVPLGA-IVELVARLKEV---G 76 (133) T ss_dssp EECCGGGBCTT------SBBCHHHHHHHHHHHHH-HHHHHHHTSCEEEEEEEEEEECSCCBTTC-EEEEEEEEEEE---C T ss_pred EEECHHHCCCC------CCCHHHHHHHHHHHHHH-HHHHHHCCCCEEEEEEEEEEECCCCCCCC-EEEEEEEEEEE---C T ss_conf 99897885999------83909999999999999-99998379957999951799867667797-99999999981---5 Q ss_pred CEEEEEEEEEEECC-------EEEEEEEEEEEEE Q ss_conf 57999999999999-------9999997106998 Q gi|254780460|r 139 VVLGAADGWVKVNG-------KEIYQANDLRVCL 165 (172) Q Consensus 139 ~~~~~~~g~~~vdg-------~~i~~a~~l~vgl 165 (172) +.......++++.+ .++.++.-.-|.+ T Consensus 77 rsS~~V~v~v~~~~~~~g~~~~~~~~a~ftfVav 110 (133) T 2eis_A 77 RTSMRVEVEMWVEPVKEGEEAYLAARGGFVLVAV 110 (133) T ss_dssp SSEEEEEEEEEECCCSTTCCCEEEEEEEEEEEEB T ss_pred CEEEEEEEEEEEECCCCCCEEEEEEEEEEEEEEE T ss_conf 4899999999997176797899999999999998 No 76 >3ck1_A Putative thioesterase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.74A {Ralstonia eutropha JMP134} Probab=38.52 E-value=19 Score=15.70 Aligned_cols=59 Identities=8% Similarity=0.054 Sum_probs=38.1 Q ss_pred EEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEE-ECCEEEEEEEEEEEEEE Q ss_conf 6676304511410233798579999998896307857999999999-99999999971069986 Q gi|254780460|r 104 GRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVK-VNGKEIYQANDLRVCLT 166 (172) Q Consensus 104 ~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~-vdg~~i~~a~~l~vgl~ 166 (172) .....-.+++|++++.+||. ++.+..+.++.. ..+ .+...++ -||+++++++...|.+- T Consensus 58 ~~v~~~~~~~y~~~~~~gd~-v~v~~~~~~~~~--~s~-~~~~~i~~~~g~~~a~~~~~~v~vd 117 (150) T 3ck1_A 58 GVPTADLHCRFVAPSRLGET-LTRELRVVKLGQ--SSF-TVQVRFMGPDSGLRLEVTQRLVCVD 117 (150) T ss_dssp ECCEEEEEEEECSCCBTTCE-EEEEEEEEEECS--SEE-EEEEEEECTTSCEEEEEEEEEECEE T ss_pred EEEEEEEEEEEECCCCCCCE-EEEEEEEEEECC--EEE-EEEEEEECCCCEEEEEEEEEEEEEE T ss_conf 99999999855326544438-999999997187--799-9999999599839999999999999 No 77 >3cjy_A Putative thioesterase; YP_496845.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.70A {Novosphingobium aromaticivorans DSM12444} Probab=29.94 E-value=27 Score=14.85 Aligned_cols=46 Identities=11% Similarity=0.242 Sum_probs=29.8 Q ss_pred CCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEE Q ss_conf 45114102337985799999988963078579999999999999999997 Q gi|254780460|r 110 SNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQAN 159 (172) Q Consensus 110 ~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~ 159 (172) -.+.|-+.+.++.. ++ ++++.+.. ++.+....+++.-+|++++++. T Consensus 59 ~~~~Fl~~~~~~~p-v~--~~V~~lR~-Gr~~~~~~v~~~Q~g~~~~~a~ 104 (259) T 3cjy_A 59 GSLQFVSFTPLGSV-LD--LTVEVLQS-GRTLAQARVAGTVDGRLVFHSG 104 (259) T ss_dssp EEEEECSCCBTTCE-EE--EEEEEEEE-CSSCEEEEEEEEETTEEEEEEE T ss_pred EEEEECCCCCCCCC-EE--EEEEEEEC-CCCEEEEEEEEEECCCCEEEEE T ss_conf 99996067799998-89--99999878-9978999999997897589999 No 78 >3d6l_A Putative hydrolase; hot DOG fold, thioesterase, acyl-COA; 2.59A {Campylobacter jejuni} Probab=29.28 E-value=27 Score=14.79 Aligned_cols=71 Identities=8% Similarity=-0.085 Sum_probs=42.8 Q ss_pred CCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE Q ss_conf 9521127578887998864012334688266763045114102337985799999988963078579999999999 Q gi|254780460|r 75 DPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV 150 (172) Q Consensus 75 ~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v 150 (172) .-.+-|-.+++-|-+++++.+. ...........++++.|.++|..|| .+..+.++..+ ++.......+++. T Consensus 21 ~G~l~GG~l~~~~D~~a~~~a~-~~~~~~~vt~~i~~i~F~~Pv~~Gd-~v~~~a~v~~~---GrsS~~V~vev~~ 91 (137) T 3d6l_A 21 AGNIFGGWILSQIDLAGAIAAR-ELSPERVVTISMDKVVFKEPVFIGD-IISCYSKVVNV---GNTSISVEVEVTA 91 (137) T ss_dssp TSSBCHHHHHHHHHHHHHHHHH-TSSSSEEEEEEEEEEECCSCCCTTC-EEEEEEEEEEE---CSSEEEEEEEEEE T ss_pred CCEEEHHHHHHHHHHHHHHHHH-HHCCCCEEEEEECCEEECCCCCCCC-EEEEEEEEEEC---CCCEEEEEEEEEE T ss_conf 9819189999999999999999-9769966999974489857667797-99999999983---5748999999999 No 79 >2ali_A Hypothetical protein PA2801; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.75A {Pseudomonas aeruginosa} SCOP: d.38.1.1 Probab=26.54 E-value=31 Score=14.49 Aligned_cols=93 Identities=11% Similarity=-0.113 Sum_probs=49.1 Q ss_pred CCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEE Q ss_conf 04556899521127578887998864012334688266763045114102337985799999988963078579999999 Q gi|254780460|r 68 FDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGW 147 (172) Q Consensus 68 f~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~ 147 (172) ..|| .+++.... .+-+|-.+.+.-+..............-..++|++++..+|. ++.++.|.++.... +...-. T Consensus 43 ~~Gh-vnn~~Y~~-~~e~Ar~~~~~~~g~~~~~~~~~~vv~~~~~~y~~p~~~~d~-l~V~~~v~~ig~~s---~~~~~~ 116 (158) T 2ali_A 43 SYGH-VNNTLYFQ-YLEEARVAWFETLGIDLEGAAEGPVVLQSLHTYLKPVVHPAT-VVVELYAGRLGTSS---LVLEHR 116 (158) T ss_dssp TTSS-BCTTHHHH-HHHHHHHHHHHHTTCCCSSCSEEEEEEEEEEEECSCCCSSCE-EEEEEEEEEECSSE---EEEEEE T ss_pred CCCC-EEHHHHHH-HHHHHHHHHHHHCCCCHHHCCCEEEEEEEEEEECCCCCCCCC-EEEEEEEEECCCEE---EEEEEE T ss_conf 8682-35599999-999999999998099866756304999999799975658982-59999999928809---999999 Q ss_pred EEE---CCEEEEEEEEEEEEEE Q ss_conf 999---9999999971069986 Q gi|254780460|r 148 VKV---NGKEIYQANDLRVCLT 166 (172) Q Consensus 148 ~~v---dg~~i~~a~~l~vgl~ 166 (172) ++. ++.++++++-..|.+- T Consensus 117 i~~~~~~~~~~A~~~~~~V~vD 138 (158) T 2ali_A 117 LHTLEDPQGTYGEGHCKLVWVR 138 (158) T ss_dssp EEESSCTTSCCEEEEEEEEEEE T ss_pred EEECCCCCEEEEEEEEEEEEEE T ss_conf 9998999789999999999999 No 80 >2qq2_A Cytosolic acyl coenzyme A thioester hydrolase; ACOT7, C-terminal domain, thioesterase, structural genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} Probab=25.37 E-value=32 Score=14.36 Aligned_cols=83 Identities=10% Similarity=0.085 Sum_probs=44.4 Q ss_pred ECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCC Q ss_conf 71844134235788750786553004556899521127578887998864012334688266763045114102337985 Q gi|254780460|r 44 SETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCK 123 (172) Q Consensus 44 ~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~ 123 (172) .+++...+.....-..-|-|.+.-. ...+=|-.+++-+-.++++.+. ..........+++++.|+++|..|| T Consensus 32 ~~~~~~v~~s~~~l~~lv~P~~~N~------~G~l~GG~ll~~~D~~a~~~A~-~~~~~~~Vtasvd~i~F~~Pv~vGd- 103 (193) T 2qq2_A 32 NPEPNTVSYSQSSLIHLVGPSDCTL------HGFVHGGVTMKLMDEVAGIVAA-RHCKTNIVTASVDAINFHDKIRKGC- 103 (193) T ss_dssp -CCTTSHHHHCEEEEEECCGGGBCS------SSBBCHHHHHHHHHHHHHHHHH-HHHSSEEEEEEEEEEEECSCCBTTE- T ss_pred CCCCCCCCHHHHEHEEEECCCCCCC------CCCEEHHHHHHHHHHHHHHHHH-HHHCCCEEEEEECCEEECCCCCCCC- T ss_conf 7888876420201002688010588------9829699999999999999999-9749955999976579778877798- Q ss_pred EEEEEEEEEEE Q ss_conf 79999998896 Q gi|254780460|r 124 LVEYGIDFKKI 134 (172) Q Consensus 124 ~i~~~i~ik~v 134 (172) .+++.-.|..+ T Consensus 104 ~l~~~a~V~~~ 114 (193) T 2qq2_A 104 VITISGRMTFT 114 (193) T ss_dssp EEEEEEEEEEE T ss_pred EEEEEEEEEEC T ss_conf 89999999982 No 81 >2q2b_A Cytosolic acyl coenzyme A thioester hydrolase; ACOT7, C-terminal domain; 2.50A {Mus musculus} Probab=25.32 E-value=32 Score=14.36 Aligned_cols=73 Identities=11% Similarity=0.091 Sum_probs=39.8 Q ss_pred EEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEE Q ss_conf 78875078655300455689952112757888799886401233468826676304511410233798579999998896 Q gi|254780460|r 55 VRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKI 134 (172) Q Consensus 55 i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v 134 (172) ..-.+-|.|++==. .-.+=|--+++-+-.++++. ............+++++.|..++..|| .+.++.+|..+ T Consensus 27 ~~~~~~v~P~d~N~------~G~l~GG~ll~~~D~~a~~~-A~~~~~~~~vt~~vd~i~F~~Pv~~Gd-~l~~~a~V~~~ 98 (179) T 2q2b_A 27 SSLIHLVGPSDCTL------HGFVHGGVTMKLMDEVAGIV-AARHCKTNIVTASVDAINFHDKIRKGC-VITISGRMTFT 98 (179) T ss_dssp EEEEEECC------------CCBCCHHHHHHHHHHHHHHH-HHHHHCSCCEEEEEEEEEECSCCBTTE-EEEEEEEEEEE T ss_pred EEEEEEECHHHCCC------CCCEEHHHHHHHHHHHHHHH-HHHHHCCCEEEEEECEEEECCCCCCCC-EEEEEEEEEEC T ss_conf 57788978768688------98192999999999999999-999709954998734059848867896-69999999973 Q ss_pred E Q ss_conf 3 Q gi|254780460|r 135 L 135 (172) Q Consensus 135 ~ 135 (172) . T Consensus 99 G 99 (179) T 2q2b_A 99 S 99 (179) T ss_dssp E T ss_pred C T ss_conf 8 No 82 >3hm0_A Probable thioesterase; niaid, ssgcid, decode, UW, SBRI, infectious disease, rhizobiales, bacteremia, endocarditis, bacillary angiomatosis; 2.50A {Bartonella henselae} Probab=24.25 E-value=34 Score=14.24 Aligned_cols=102 Identities=6% Similarity=-0.199 Sum_probs=60.9 Q ss_pred EEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCC-------CCCCCCEEEEEECCCEEEEEECCCCCEEEEEEE Q ss_conf 7507865530045568995211275788879988640123-------346882667630451141023379857999999 Q gi|254780460|r 58 EMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGW-------LGELGKGRAVSVSNIKFRGMVTPDCKLVEYGID 130 (172) Q Consensus 58 ek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~-------~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ 130 (172) +..|.++|==..|| .+++...- ..-+|..+.+.-+... ....+......-.+++|++++..+|. ++.+.. T Consensus 40 ~i~Vr~~D~D~~Gh-V~n~~Y~~-~~e~AR~~~~~~~g~~~~~l~~~~~~~g~~~vv~~~~i~y~~p~~~~d~-l~v~~~ 116 (167) T 3hm0_A 40 QARVYVADTDFSGV-VYHARYLE-FFERGRSEFLRDTGFNNTLLASGVEGEKLFFVVRHMEINFSRPAQIDNL-LTIKTR 116 (167) T ss_dssp EEECCGGGBCTTSS-BCTTHHHH-HHHHHHHHHHHTTSCCHHHHHHTTTSSCEEEEEEEEEEEECSCCCTTCE-EEEEEE T ss_pred EEEECHHHCCCCCE-ECHHHHHH-HHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCC-EEEEEE T ss_conf 89974899489875-75899999-9999999999984897788766664287699998603285145558981-799999 Q ss_pred EEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEE Q ss_conf 88963078579999999999999999997106998 Q gi|254780460|r 131 FKKILRGRVVLGAADGWVKVNGKEIYQANDLRVCL 165 (172) Q Consensus 131 ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l~vgl 165 (172) +.++. .....+.-.++.+|+++++++-..|.+ T Consensus 117 v~~~~---~~s~~~~~~i~~~~~~~a~a~~~~v~v 148 (167) T 3hm0_A 117 ISRLQ---GARFFMEQYILHGESMLVTAKVEIALI 148 (167) T ss_dssp EEEEC---SSEEEEEEEEEETTEEEEEEEEEEEEE T ss_pred EEECC---CEEEEEEEEEEECCEEEEEEEEEEEEE T ss_conf 99739---769999999998999999999999999 No 83 >2q78_A Uncharacterized protein; TM0581, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE MLC; 2.20A {Thermotoga maritima MSB8} SCOP: d.38.1.7 Probab=23.75 E-value=35 Score=14.18 Aligned_cols=86 Identities=12% Similarity=0.055 Sum_probs=50.7 Q ss_pred CEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEE Q ss_conf 52112757888799886401233468826676304511410233798579999998896307857999999999999999 Q gi|254780460|r 76 PVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEI 155 (172) Q Consensus 76 PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i 155 (172) ||+--+-++.-|-+++.-++...-..+..--..--+++...+..+|. +++...++.++..+ .+.|+++++-++..| T Consensus 46 ~VlsTp~LialmE~aa~~~l~~~L~~g~tTVGt~v~I~HlaptpiG~-~V~v~A~l~~vdgr---~l~F~veA~d~~~~I 121 (153) T 2q78_A 46 HLVATSALIGVVHRVSYELLSRYLPNDYTAVVVETLARHVKAVPTGT-RVAVGVRVVGVVGN---RVKFRGIVMSGDEKI 121 (153) T ss_dssp CBBCHHHHHHHHHHHHHHHHHTTSCTTEEEEEEEEEEEECSCCBSSE-EEEEEEEEEEEETT---EEEEEEEEEETTEEE T ss_pred EEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCC-EEEEEEEEEEEECC---EEEEEEEEEECCCEE T ss_conf 06826999999999999999966899972788999999814679999-99999999999799---999999999999749 Q ss_pred EEEEEEEEEE Q ss_conf 9997106998 Q gi|254780460|r 156 YQANDLRVCL 165 (172) Q Consensus 156 ~~a~~l~vgl 165 (172) .+++--.+-+ T Consensus 122 g~GtH~R~IV 131 (153) T 2q78_A 122 LEAEFVRAIV 131 (153) T ss_dssp EEEEEEEEEE T ss_pred EEEEEEEEEE T ss_conf 9999999999 No 84 >2gvh_A AGR_L_2016P; 15159470, acyl-COA hydrolase, structural genomics, joint center for structural genomics, JCSG; 2.50A {Agrobacterium tumefaciens str} SCOP: d.38.1.1 d.38.1.1 Probab=22.33 E-value=37 Score=14.01 Aligned_cols=86 Identities=10% Similarity=-0.133 Sum_probs=47.0 Q ss_pred EEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEE Q ss_conf 57887507865530045568995211275788879988640123346882667630451141023379857999999889 Q gi|254780460|r 54 VVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKK 133 (172) Q Consensus 54 ~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~ 133 (172) .+.-..-+.|++=-.. -.+-|--++.-|-+++++.. ............++++.|+.+|..|+ .+.++-+|.. T Consensus 159 ~~~~~~~v~P~d~N~~------g~l~GG~l~~~~D~~a~~~a-~~~~~~~~vt~~vd~i~F~~Pv~vGd-~l~~~a~V~~ 230 (288) T 2gvh_A 159 AVTMVEIVFPDQANSA------GRMFGGEAIAYMTKAAFVAA-SRYCGKLVVLASSERIDFARAIEIGE-IVEAQAHVER 230 (288) T ss_dssp CEEEEEECCGGGBCTT------SBBCHHHHHHHHHHHHHHHH-HHHHSSEEEEEEECCEEBSSCCBTTE-EEEEEEEEEE T ss_pred EEEEEEECCHHHCCCC------CCCHHHHHHHHHHHHHHHHH-HHHCCCCCEEEEECCEEECCCCCCCC-EEEEEEEEEE T ss_conf 0699997086773756------85719999999999999999-99759975899978849867337698-9999999998 Q ss_pred EECCCCEEEEEEEEEEE Q ss_conf 63078579999999999 Q gi|254780460|r 134 ILRGRVVLGAADGWVKV 150 (172) Q Consensus 134 v~~~~~~~~~~~g~~~v 150 (172) + ++.......++++ T Consensus 231 ~---G~tS~~V~v~v~~ 244 (288) T 2gvh_A 231 V---GRSSMSIQTKLWS 244 (288) T ss_dssp E---CSSEEEEEEEEEE T ss_pred C---CCEEEEEEEEEEE T ss_conf 2---8659999999999 Done!