HHSEARCH alignment of GI: 254780460 and SCOP domain: d1u1za_

Alignment
>d1u1za_ d.38.1.6 (A:) (3R)-hydroxymyristoyl ACP dehydrase FabZ {Pseudomonas aeruginosa [TaxId: 287]}
Probab=100.00  E-value=1e-33  Score=217.90  Aligned_cols=135  Identities=24%  Similarity=0.361  Sum_probs=112.8

Q ss_pred             CCHHHHHHHCCCCCCCCCCCCCC-CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHH
Q ss_conf             89889998418835579988899-86412256899997184413423578875078655300455689952112757888
Q gi|254780460|r    8 YTYEEILRCGEGEMFGEGNAQLP-KPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDA   86 (172)
Q Consensus         8 f~~~~i~~~~~g~~fg~~~~rLP-~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa   86 (172)
                      .|.++|.++            || ++||||||||++++..++     .++|+|+|+.|+|||+||||++|+|||||++|+
T Consensus         2 ~~~~~I~~l------------lPhR~PfllvD~i~~~~~~g~-----~~~~~k~v~~~e~~~~~hfp~~pv~Pgvl~iE~   64 (145)
T d1u1za_           2 MDINEIREY------------LPHRYPFLLVDRVVELDIEGK-----RIRAYKNVSINEPFFNGHFPEHPIMPGVLIIEA   64 (145)
T ss_dssp             BCHHHHTTT------------CCCCTTSCCCCEEEEEETTTT-----EEEEEEECCTTSTTGGGSCTTSCCCCHHHHHHH
T ss_pred             CCHHHHHHH------------CCCCCCEEEEEEEEEEECCCC-----EEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf             897999986------------899898599999999935997-----899999826774301555567642563589999


Q ss_pred             HHHHHHHHCCCCC-----CCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEE
Q ss_conf             7998864012334-----68826676304511410233798579999998896307857999999999999999999710
Q gi|254780460|r   87 LWQLTGFFLGWLG-----ELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQANDL  161 (172)
Q Consensus        87 ~~Ql~~~~~~~~~-----~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~l  161 (172)
                      |||++++++....     +...+++.++.++||+++|.|||+ +++++++.+.   +..+++++|+++|||+++++++-+
T Consensus        65 maQ~~~~l~~~~~~~~~~~~~~~~l~~i~~~kf~~~v~PGd~-L~i~v~~~~~---~~~~~~~~~~~~v~~~~v~~a~l~  140 (145)
T d1u1za_          65 MAQAAGILGFKMLDVKPADGTLYYFVGSDKLRFRQPVLPGDQ-LQLHAKFISV---KRSIWKFDCHATVDDKPVCSAEII  140 (145)
T ss_dssp             HHHHHHHHHHHHHTCCC---CEEEEEEEEEEEECSCCCTTCE-EEEEEEEEEE---ETTEEEEEEEEEETTEEEEEEEEE
T ss_pred             HHHHHHHHHHHHCCCCCCCCCEEEEEECEEEEECCCCCCCCE-EEEEEEEEEE---ECCEEEEEEEEEECCEEEEEEEEE
T ss_conf             999999998763367787885999970408999455579989-9999999996---589999999999999999999999


Q ss_pred             EE
Q ss_conf             69
Q gi|254780460|r  162 RV  163 (172)
Q Consensus       162 ~v  163 (172)
                      ++
T Consensus       141 ~a  142 (145)
T d1u1za_         141 CA  142 (145)
T ss_dssp             EE
T ss_pred             EE
T ss_conf             99


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: FabZ-like
domain: (3R)-hydroxymyristoyl ACP dehydrase FabZ
species: Pseudomonas aeruginosa [TaxId: 287]