HHSEARCH alignment of GI: 254780460 and SCOP domain: d1vh5a_

Alignment
>d1vh5a_ d.38.1.5 (A:) Hypothetical protein YdiI {Escherichia coli [TaxId: 562]}
Probab=91.74  E-value=0.38  Score=24.41  Aligned_cols=126  Identities=17%  Similarity=0.056  Sum_probs=71.5

Q ss_pred             CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHH
Q ss_conf             65589889998418835579988899864122568999971844134235788750786553004556899521127578
Q gi|254780460|r    5 KSSYTYEEILRCGEGEMFGEGNAQLPKPPMLMFHRITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGL   84 (172)
Q Consensus         5 ~~~f~~~~i~~~~~g~~fg~~~~rLP~~p~lmiDrV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~i   84 (172)
                      |..++.|+|.++.++..        +  -+|=+ +++++++       |.++.+..++++  +..    ...++=|-.+.
T Consensus         5 ~~~~~~e~ln~~~~~~~--------~--~~Lg~-~~~~~~~-------g~~~~~~~~~~~--~~n----~~g~~HGG~ia   60 (138)
T d1vh5a_           5 KRKITLEALNAMGEGNM--------V--GFLDI-RFEHIGD-------DTLEATMPVDSR--TKQ----PFGLLHGGASV   60 (138)
T ss_dssp             SSCCCHHHHHHTTTTSH--------H--HHTTC-EEEEECS-------SCEEEEEECSTT--TBC----TTSSBCHHHHH
T ss_pred             CCCCCHHHHHHHCCCCH--------H--HHHCC-EEEEEEC-------CEEEEEEECCHH--HCC----CCCCCCCEEEE
T ss_conf             68789999975461536--------7--87298-9999959-------989999998999--939----99917120256


Q ss_pred             HHHHHHHHHHCC-CCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEE
Q ss_conf             887998864012-334688266763045114102337985799999988963078579999999999-9999999971
Q gi|254780460|r   85 DALWQLTGFFLG-WLGELGKGRAVSVSNIKFRGMVTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQAND  160 (172)
Q Consensus        85 Ea~~Ql~~~~~~-~~~~~~~~~~~~~~~vkfr~~V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~  160 (172)
                       +++-.++.+.. ............--++.|.+++.+|+  +..+.   ++.+.++.+++++++++. +|+++++++-
T Consensus        61 -tl~D~a~~~a~~~~~~~~~~~~t~~~~i~flr~~~~g~--l~a~a---~vi~~Gr~~~~~~~~i~~~~g~lvA~a~~  132 (138)
T d1vh5a_          61 -VLAESIGSVAGYLCTEGEQKVVGLEINANHVRSAREGR--VRGVC---KPLHLGSRHQVWQIEIFDEKGRLCCSSRL  132 (138)
T ss_dssp             -HHHHHHHHHHHHHTSCTTCEEEEEEEEEEECSCCCSSE--EEEEE---EEEEECSSEEEEEEEEECTTSCEEEEEEE
T ss_pred             -EEHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCC--EEEEE---EEEEECCCEEEEEEEEECCCCCEEEEEEE
T ss_conf             -63133344433330232001225406789983268985--89999---99991896999999999499989999989


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein YdiI
species: Escherichia coli [TaxId: 562]