HHSEARCH alignment of GI: 254780460 and SCOP domain: d1wlua1

Alignment
>d1wlua1 d.38.1.5 (A:2-117) Phenylacetic acid degradation protein PaaI {Thermus thermophilus [TaxId: 274]}
Probab=93.88  E-value=0.19  Score=26.23  Aligned_cols=101  Identities=7%  Similarity=-0.074  Sum_probs=58.3

Q ss_pred             EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEE
Q ss_conf             89999718441342357887507865530045568995211275788879988640123346882667630451141023
Q gi|254780460|r   39 RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMV  118 (172)
Q Consensus        39 rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V  118 (172)
                      ++.++++       |+++.+..++++  +..    ...++=|-.+...+=-++ .+.......  . ...--+++|.+++
T Consensus        11 ~~~~~~~-------g~~~~~~~~~~~--~~n----~~G~~hGG~i~tl~D~~~-~~a~~~~~~--~-vT~~l~i~fl~p~   73 (116)
T d1wlua1          11 KVLHLAP-------GEAVVAGEVRAD--HLN----LHGTAHGGFLYALADSAF-ALASNTRGP--A-VALSCRMDYFRPL   73 (116)
T ss_dssp             EEEEEET-------TEEEEEEECCGG--GBC----TTSSBCHHHHHHHHHHHH-HHHHHTTSC--E-EEEEEEEEECSCC
T ss_pred             EEEEEEC-------CEEEEEEEECHH--HCC----CCCCCCCEEEEEEEHHHH-HHHHHCCCC--E-EEEEEEEEECCCC
T ss_conf             9999969-------999999990999--969----999792765888961111-125531672--6-9999999872467


Q ss_pred             CCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEE
Q ss_conf             379857999999889630785799999999999999999971
Q gi|254780460|r  119 TPDCKLVEYGIDFKKILRGRVVLGAADGWVKVNGKEIYQAND  160 (172)
Q Consensus       119 ~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~vdg~~i~~a~~  160 (172)
                      .+|+ .++.+.++.   +.++..++.+++++.+|+++++++.
T Consensus        74 ~~g~-~l~~~a~v~---~~g~~~~~~~~~i~~~~~lvA~a~~  111 (116)
T d1wlua1          74 GAGA-RVEARAVEV---NLSRRTATYRVEVVSEGKLVALFTG  111 (116)
T ss_dssp             CTTC-EEEEEEEEE---EECSSEEEEEEEEEETTEEEEEEEE
T ss_pred             CCCC-EEEEEEEEE---EECCCEEEEEEEEEECCEEEEEEEE
T ss_conf             9998-999999999---9588699999999999999999999


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Phenylacetic acid degradation protein PaaI
species: Thermus thermophilus [TaxId: 274]