HHSEARCH alignment of GI: 254780460 and SCOP domain: d2f0xa1

Alignment
>d2f0xa1 d.38.1.5 (A:3-138) Hypothetical protein Them2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.08  E-value=0.26  Score=25.43  Aligned_cols=103  Identities=17%  Similarity=0.113  Sum_probs=59.8

Q ss_pred             EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHH-HHHHCCCCCCCCCEEEEEECCCEEEEE
Q ss_conf             8999971844134235788750786553004556899521127578887998-864012334688266763045114102
Q gi|254780460|r   39 RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQL-TGFFLGWLGELGKGRAVSVSNIKFRGM  117 (172)
Q Consensus        39 rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql-~~~~~~~~~~~~~~~~~~~~~vkfr~~  117 (172)
                      +++++++       |+++.+..++++.=  .   |. .++=|-.+. +++-. +++.+... .........--++.|.++
T Consensus        27 ~~~~~~~-------g~~~~~~~v~~~~~--n---~~-G~lhGG~i~-~l~D~~~~~a~~~~-~~~~~~vT~~l~i~fl~p   91 (136)
T d2f0xa1          27 TLVSAAP-------GKVICEMKVEEEHT--N---AI-GTLHGGLTA-TLVDNISTMALLCT-ERGAPGVSVDMNITYMSP   91 (136)
T ss_dssp             EEEEEET-------TEEEEEEECCGGGB--C---TT-SBBCHHHHH-HHHHHHHHHHHHTS-SSCCCCEEEEEEEEECSC
T ss_pred             EEEEECC-------CEEEEEEECCHHHC--C---CC-CCCCHHHHH-HHHHHHHHHHHHHH-CCCCCCEEEEEEEEEEEC
T ss_conf             9999829-------99999999699996--9---88-965514789-99999999999860-789720334677899714


Q ss_pred             ECCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE--CCEEEEEEEE
Q ss_conf             337985799999988963078579999999999--9999999971
Q gi|254780460|r  118 VTPDCKLVEYGIDFKKILRGRVVLGAADGWVKV--NGKEIYQAND  160 (172)
Q Consensus       118 V~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v--dg~~i~~a~~  160 (172)
                      +.+|+. +..+.+   +.+.++.+++.+++++.  +|+++++++-
T Consensus        92 ~~~G~~-v~~~a~---v~~~gr~~~~~~~~i~~~~~~~liA~~~~  132 (136)
T d2f0xa1          92 AKLGED-IVITAH---VLKQGKTLAFTSVDLTNKATGKLIAQGRH  132 (136)
T ss_dssp             CBTTCE-EEEEEE---EEEECSSEEEEEEEEEETTTCCEEEEEEE
T ss_pred             CCCCCE-EEEEEE---EEEECCCEEEEEEEEEECCCCEEEEEEEE
T ss_conf             799998-999999---99958879999999999999989999998


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein Them2
species: Human (Homo sapiens) [TaxId: 9606]